Basic Information

Insect: Blastobasis adustella
Gene Symbol: -
Assembly: GCA_907269095.1
Location: OU026131.1:3058141-3060552[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3e-06 0.00029 22.0 1.7 1 23 217 239 217 239 0.98

2 9 2.9e-08 2.7e-06 28.3 1.6 3 23 247 267 245 267 0.98

3 9 9.8e-05 0.0093 17.2 0.3 1 23 273 295 273 295 0.98

4 9 1.1e-05 0.001 20.3 1.7 1 23 301 323 301 323 0.99

5 9 2.2e-05 0.0021 19.3 1.7 2 23 427 448 426 448 0.96

6 9 2.8e-09 2.7e-07 31.5 1.6 1 23 454 476 454 476 0.98

7 9 0.0024 0.23 12.9 0.6 3 23 484 504 482 504 0.97

8 9 6.1e-05 0.0058 17.9 1.5 1 23 510 532 510 532 0.99

9 9 0.019 1.8 10.1 0.8 1 23 538 562 538 562 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3e-06	0.00029	22.0	1.7	1	23	217	239	217	239	0.98
2	9	2.9e-08	2.7e-06	28.3	1.6	3	23	247	267	245	267	0.98
3	9	9.8e-05	0.0093	17.2	0.3	1	23	273	295	273	295	0.98
4	9	1.1e-05	0.001	20.3	1.7	1	23	301	323	301	323	0.99
5	9	2.2e-05	0.0021	19.3	1.7	2	23	427	448	426	448	0.96
6	9	2.8e-09	2.7e-07	31.5	1.6	1	23	454	476	454	476	0.98
7	9	0.0024	0.23	12.9	0.6	3	23	484	504	482	504	0.97
8	9	6.1e-05	0.0058	17.9	1.5	1	23	510	532	510	532	0.99
9	9	0.019	1.8	10.1	0.8	1	23	538	562	538	562	0.95

Sequence Information

Coding Sequence: ATGAGTTTCATGGGTCGTTTTATTAAATCCTCGTTCGATACAACAGCGCCATACGTGCTATACAAGGATGGCGTGGAGCGCGCTCCCCCGGGCACGCAGTGGGGCGGCGGCGTGCTGGACGGCGGCTACCAGCCCATGCAGCACCAGAGCCCCGGCGGGCCCTCGCCGCAGCCCGAGCCGCAGCTGGCGTCGCCCGCGCCCTCACCCTACCCGCCCGCGCCACCGCCGCCCGACCCGACCACCTCGCAGGAGGACGCCGCGCAACAACTAGCCCAGCAACAGGCCCAGCAGCAGGCTCAGCAACAACAGCAGCAACAGCAACAACCATCCCCTGAGCATATGCAAGTCGAGCAGCAACTGCAGCCCCAACCGCCCACGCAGGACCACCTCGATCGCGCGCCGTGCTTCGTCCCCCAACCGGATTTGCAACAGCAGTACACGCCCTATTTTAAGGAGACGAGACCCGCGAGCCACATGCTCGGCACGGGCGGTTTCCCGTTACACTATCTGAAACAGAACGGCGGAGTGCTCTCGCTCGAAGGACCGCTCGACCAGTACGCGGCGCCAGAACTGCGGCATCTGCCCGATATCGTGCAACCCGAACCGCCCAAGCCGCGGAAGCACAACCCAAACTCCGAACTGCGCCTGTTCAAATGCCTAACGTGCGGGAAAGACTTCAAACAGAAGTCGACTCTGCTGCAGCACGAGCGCATCCACACGGACTCGCGGCCGTACGGCTGCCCCGAGTGCGGCAAGCGGTTCCGCCAGCAGTCGCACCTCACACAACACCTGCGCATCCACGCGAACGAGAAGCCGTACGCGTGCGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTGAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGACGTGTCACCGCACCTCATCTTCAAGAACGGCACTACGCCGACGCTCTGGCCGCAGGATGTGCCCTACCCGCCCGACGAGAACAAGGAGGAGATTCAGTCGCAGTACGGCGACGCGGACGGCCAAAACGGTGAACAGCGTGGCTCCTGCTTTTCACCCGGCGACACCGCGCAATACCCCGCCTACTTCAAGGACACCAAAGGACTCAACCACACCGTTTTCGGGTCGGGACTCTCACTCCAGTACCTAAAGGGCGGCAAGCTGCCCGACGTGCTGGGCGGCGGGAGGGCGATGCCGCTGTACGTGCGCTGCCCGATTTGCCAGAAGGAGTTCAAGCAGAAGTCGACGCTGCTGCAGCACGGCTGCATCCACATAGAGTCGCGGCCGTACCCGTGCCCCGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCACCTGACGCAGCACTTGCGCATCCATACCAACGAGAAGCCGTACGGCTGCGTGTACTGCCCGCGCTTCTTCCGGCAGCGCACCATCCTCAACCAGCATCTGCGCATCCACACCGGCGAGAAGCCGTACAAGTGCACGCAGTGCGGCAAGGACTTCCGGCAGAAGGCCATCCTGGACCAGCACACGCGCACGCACCAGGGCGACCGGCCGTTCTGCTGCCCGATGCCCAACTGCCGGCGGCGCTTCGCCACCGAGCCGGAGGTGAAGAAGCACATCGACAACCACATGAACCCGCACGCGGCCAAGGCGCGGCGCGCGGACGCCAAGCCGCCGCGGCCGCTGCCGCCCGCGTCCGCCGTCGTCAAGCCCGAGCTCTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCCCGGCCGCCGCCGAGTTCAAGCCGCCCGTGGGCGCGTGCCTGCCCGCGCAGTGA
Protein Sequence: MSFMGRFIKSSFDTTAPYVLYKDGVERAPPGTQWGGGVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPPDPTTSQEDAAQQLAQQQAQQQAQQQQQQQQQPSPEHMQVEQQLQPQPPTQDHLDRAPCFVPQPDLQQQYTPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYAAPELRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQDVSPHLIFKNGTTPTLWPQDVPYPPDENKEEIQSQYGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHTVFGSGLSLQYLKGGKLPDVLGGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKPPRPLPPASAVVKPELYFPQCYAPPFQQFPAAAEFKPPVGACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_01363324;
80% Identity: -