Badu022250.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026127.1:5618608-5626672[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0072 0.68 11.4 1.5 3 23 598 619 597 619 0.96 2 21 0.35 33 6.1 0.3 1 22 979 1000 979 1000 0.95 3 21 0.051 4.8 8.7 0.6 2 22 1075 1095 1074 1095 0.94 4 21 4.1 3.9e+02 2.7 0.0 2 23 1103 1125 1102 1125 0.88 5 21 0.015 1.4 10.4 0.2 3 23 1145 1166 1143 1166 0.96 6 21 0.044 4.2 8.9 2.2 1 23 1172 1195 1172 1195 0.92 7 21 0.13 12 7.4 0.0 1 23 1221 1244 1221 1244 0.90 8 21 0.019 1.8 10.0 3.4 1 23 1249 1271 1249 1271 0.97 9 21 0.017 1.6 10.2 0.2 1 23 1277 1300 1277 1300 0.95 10 21 0.0011 0.1 14.0 1.3 1 23 1313 1335 1313 1335 0.98 11 21 0.00018 0.017 16.4 1.8 1 23 1382 1405 1382 1405 0.97 12 21 0.0013 0.12 13.7 3.3 1 23 1468 1491 1468 1491 0.96 13 21 0.0011 0.11 13.9 2.1 2 23 1515 1537 1514 1537 0.95 14 21 0.089 8.4 7.9 0.1 2 23 1543 1565 1542 1565 0.93 15 21 0.01 0.96 10.9 0.2 1 21 1609 1629 1609 1630 0.95 16 21 0.0013 0.12 13.8 0.6 1 23 1640 1662 1640 1662 0.93 17 21 0.00011 0.01 17.1 0.4 2 23 1754 1776 1753 1776 0.93 18 21 3.4e-07 3.2e-05 25.0 1.4 3 23 1783 1803 1782 1803 0.98 19 21 0.29 28 6.3 0.0 1 23 1837 1859 1837 1859 0.97 20 21 0.0079 0.74 11.2 0.6 1 23 1865 1888 1865 1888 0.95 21 21 4.3e-05 0.0041 18.4 0.6 1 23 1897 1920 1897 1920 0.96
Sequence Information
- Coding Sequence
- ATGAGTGCGAAATATGAACGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGGACCCCCTGTCCTTGCCTCGAAAATCAACGAATGTGTCTCAGTTCAGATAAGTGAAAATGATGAACTGCCAACCAATGTCTGCAGGAAATGCATGGACAATGTCAACAACTGGCACATATTCAAGTCTGTGTGTGAAAGGACACAAAACAAATTACTGAGTTTCATTAGAAAAGATGGCAGCCAACTAGAAGAGGTGAAAGTAAAAAGTGAACCTTTGTCAGATGAAGCTTATGATGATGGAGTCCTTATTGATGGCTCGTATCCAGACTCAGAGAAATCGGGCCCATCCTCAAAGATCCAGCCCGAAGGCCCCCCAATATTGGCTTCATTGGGGCTCACACCACGGAGTGATAAGAACTATGTGGATCCTCGAATGGACTGGCATCGAGTCCATGCCATATTGGACATGGTTCAAGATGATGAAGTTGTTGATTCACTGCAGTCTGTTGAGGAAAGTGATGTTTTGCATGACTCTGATCATGATTCTGACTCTGAAACGGAGTTACAAAGTGAGGGGGACGATGACTGCCTAGATAGTAAAGAGAATTACTTTTGTAAAAACGGAAAAACCATTAATAAACGTCCAATAACAAACTTTTCTGATACTCTGGAAAAAATTAAAGTTTCAACCGATCTCAGGAAACGTAAACTTGTTAAAAAGAAACCATGCTCAGGACCAAAAGAAGCTTGGCAGCTGTTGTTTACAGATGATTTACTGGAGGTTATTGTGGCTGCTACTAATGAATACATTGCTAAGAAATGCTTGTCTAGTCCTACAACAGTAACTGAAATAAAGTCATTGATTGGAATACTATATCTACATGGTATAATGCGGCCCACACACCAGAAACGTGAAGAACTGTGGCACAGTAACACTGGGCTTATGTGTATTAAACATGTGATGACATTGGCTCGTTTTAACTTTCTATTAGAGAATATGAGATTTTTCAATGATGACTATGAAAGTAGCTTGCTACAATTGGATACCATGAAACAAATGCGTAAAGTTTTCGAAATTTTTGCTATGAATTGCCGTTTTAGTTTTGAAACCGAAGAAAATTTAGTCATTGATGAAATTGTTGTGCCTGTTTATGGGCCCTGTCCATTTAAATACCAGTTTTCTAAAAAGCTGTTAAAGACTGGAATGAAGATTGTCTTGCTTGTGGACTGTAACAATTTTTATGTATCTAATTTGGATGTCATTACTGATCCCTATTTTGATTCAAGCGAGATAGTTTGCAAGTTGGTCCAACATGTGGTGGGCACTGGCAAAATCTTAACAATGGACAGCTGGTTCACATCTACTTCGCTGATGCAAAAACTACAACATGAATATCAGTTGTACAGCATTGCAGCATTGAATCCTAAACATGATTTGATACCACTTTTATTTGTATGTAAATCCAGAAAACCCAAATCGACTCTCACTGGTTATGTGGATTCTAATGTCACCTTGACATCTTACGTGAATGCTGAATCTAAAGCATTGAATGTTGTGACAAATGATCCCAGATTATATAAAAGAGGGGGTGTCGAAAGCGAAAAAGATGAAGATGACGACGAAGATGAAATGAACGAGCCCACAACATCATTCGCAAAGGTTCCCAATATGCCTGAAGTTTCCATCACTGTAATGCGACCGACCGGTGAGACATTACAATCTCGTCAAGGAATACAGCAACTAGCATCTAAGGACTGTCTTGTCTGTGGCAGGTCCTACAGATACTCGCATAATGCTAGGCGGCACGAACTAACTTCACACAGTTTTGATAGATATACAAATAAGATTACGGTAAAGAAATCAACCACACATATGCAACCAAAACTGAGACCTAACCCGTTCAATCCTAAAGCTCGGTTAATGCCCAATCCTATTAGCCACAAGATGAAACTTATATCTAAAGATACATCCACAAAAATGATGACACCGATGACACCAAAGATGATTGCTCCACCAAAACCAATTCCTATTAAACCTAGTAGGACACCACAAAATAACTTGCCTTACCCTCTTCGCATTAAAGCTCTAAAAGATTTGCAAATAAAGAAGAAAGAGCCCCAAATTCTCAAAACACTCCTTACATCTAAACCTGAAGTTGTGGTTTCTGAACCCGAAATAATGAATTCTGCTCCAGAAAGTCCTGAAACTTTAATATCTGAACCAGAAATCGCGTCATTTCAAGTTGAAACCATTTTATCTGAACCAGATACCTATGATCCACATAACAGTGATGAAGTTGACAGTGAGATACATAGTAATCAGCATCAACATTATGATAATGATCATCAACTTTATGATAATCAAAATCAACATTATGATACTGTGGATATGAATTCTGAAAATGAAATAGAAATTGCCAGGGAAAAGGAAAACGATTTAGAAGAAAATGATGGTGAAAATGAAGTAGACGGCGATGAAGAAATGCAACAGGATGACGAAAATAATGTAGAAGGAAACGATGAAGACGAAAAAGCTTATGAATCAGAAGGTGACAACCAAGATGATGAAGAAGGGAAAGTAGATGATGAAATAGCGCCAGTTGTTGAGATCAATGAAGAAATTCAGACTAATAATTCCTATAATAGTGAACCCAATGAGGACGAGGAAGAAGAGCTAGATGCCTCAGCTGACGTTAATGAGTCTATGGATGACGAACCTATTAAAGAGTTGGATCCAAATAAATTATATGTTACTAAAACCCAAAGAGATTTCATAGATAAATACAGAGATATCATTCAACAGATTAACACTAAACGCTGTCTCTGCTGTGACAGAGAACATCCTCGGAGGAAGGCTGTCATTCAACATTTACAGAAAAATGGTCACAAAGTTCCTAAACACACATGTTACAACTGTGTAGTTACGTTTGGCCATATTGGTGCTTTGCTTAGCCATATGCGATCAAACTCATGTACAAACTTGTGGAAAATCATTTACAATGAGGATGGTATTACTGATGATTTGGTTCTTGAAGATGAACCCAAAGAAGAAAAAGTTCATCAGAAAGATATATTTAATGCCAGATCCTATGCTTGTAAGCTATGTCCCGCAAAGTTCCAGTTAAAACAATTCATAATGAAGCATGTTGTTGATGTACATGAAACTGGTCAGCCTAGAGTGCCACTGATGTGTGTACATTGTGGGGCCAGGTTTAAAGAGAGGATCATGTGGAAGAAACATCTCCGCAAAGCAGAATGTACTTTATGTGTATCTTGCGATTTATGCTCAGAAAGGTTTGGAAGTGTGCCAGATTTCAATGATCATGCGCTTGCTGTCCACGCCGGTAATTTTGATCAGGACAACCAAATCAAACGCCTTGACGATCGTCCCACTGACTGTCCTATATGTGGAAAGAAAAATTCAAATTATACTGGATTGGTTAAACATTTGAAAATTATTCATAATGAAGAAAAGCCGCATTATTGTACACATTGCGATGTGAAATTCGAACTAGCTACAGAGCTGAATCAGCATTTGTATTTAGAGCATTCTGACAAAACTCTTGGTGCTCAGAGTACTGAACCAGACATGTCACTTGTGAAGGAAGAGGCAGAGGAGTATCATTACTCGTGTACAGAATGTAATGCTATATTTGAAACAGTGGATGCATGGACCGACCATCAGGTTGCTGAGCATAACCAAATAGCTCATCACTGCGATCAATGCGAGAAGAAGTTCTTGAGGCCATCGGAACTGGCAGAGCATAAGAACACACATTTGCGAGTGAAGTTTTACCCTTGTAGTGTCTGTACTAACTCTTACAGCACCCCTCAGAAACTCTCTGAACATGTGCAGCAAGCTCACCCTGGAGTGGGTTCGTTTTCTCAGGCTGAATCGGAATTCTATTGTGACATATGTATTCGATCATTCAAAAGTAGACAAGCTTACTCCAATCATATGCGTATTCATGCTAAAGTGCCTACGACAAACAGGCGACCTGGAGAACCGAAAGGTTTCGCCCCTCAGATAATTGGAAAACCAATCAAGCAATTCAATATGGCTCAGCAATTTGTCTACAAACCAAATTGTAATGTTCCCAACGCACCATATTCTTGCGACATCTGTGGGAAAGGATTTATGCACAAAAAGAATATCTGGAAACATAAGAAGGTGCTACACGCCGATCTTGTTAATGATAGGAATGATAGTGAGGAGAATACTATGCATGCATCTACTGAAGAAGACGAGTATAATATGGATGAGAATGGCGCGATACTCTCGACTCCACAGTTTAATAGTTTCAACTTTGCCAATAACGCCAGTACCAACCATGCGCCGCCTCCAGCTCCAGCTCAGCCCGAGGTTTACACCTGCGATCTTTGTTATCAACGATTTTCATTCAGAGATAGTTTGAGAAAACATAAGCGGGCCAAGCACGGCATAATCAATGTTCCCAATAATGTCGACAATCAGTCCTCGTCAACAGGAGGAGATGGATCTCGATCTAGTTGTACTATTTGTAAGATTACGTTCTCGGACAAAAAGTCTTACTACCGCCATAGAAAGAATGTGCACAAGTCTGCTACTCAAATGTGTAAAATTTGCGGCAAGCCTCTCAACTCCACACTGGAATTGTACGAGCATTTGAAGGCGGCTCACGCTCGAGAACTGCTAGGCTACAACGCAAATCAGGGGTCTAGCAAATCCCAGGACGTGTCCCAGGATGCAGAGATGGACTACGAGGGCGAGCACGACACCGTCGACTCGGGCGTCGACTACCAGGCTCGGTACCCGTGCGACACGTGTGGCAAGCAATTCGTCGGTTTGCTGGCGTTGCAGAACCACCAATGTATAAATCAAATCACATCGCAGCCGCAGACTTTCGATTGCGAGATCTGCCACAAGAGCTACACCTCGATCGCGGCGCTGAAGAGCCACCGCGGCTGGCACCTGCGGTCCCCGGACGGCAAGGCGGCCGCGAACAACTCCGGGCTGTGGATGCCCCAGAACAAGGTGACGAGCAAGGTGAGCAAGCACGAGGTGGTGGACCCGGTGCAGCTGGCGCGCGTGTCGCACTCCGCGCCGCCCGCCGCCGTGGCCGCCGCCGCCGGGAAGCGCCGCCTGCCGCCCGAGGTGGAGGTCACCGTCGTCAACCCCAACAAGAAGCTGCGCTCCGACGACTCACTCGAGATGGACCAGCTCGGGGCCGGCACCGACGACAAGTACTGCACCATCTGCGACAAGGAGTTCACGAAGCGCGCCGCATACCAGCGCCACATGGACGAGGTGCACCAGCCCAACTCGGTTTTCTGCCCGGTGTGCGACAAGAGCTTCACGCGCAAATCGACGCTGCTCGTGCACATGAAGAAGCACTACGAGGACGGCGAGGGCGGGTCGTCGGGCGCGGGCGCGCTGGGGCCCGACTCGGCCGAGTCCGAGGATGAGGCCGAGGCCGCGCCGCCGCCCGCCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTGCTCGCGCACCGCACCATGCACTCCACGCCCTCCAAGTACTTCTGCAACATATGCAAGGTTTACTTCGCGAGAGCCTTGGACCTCACCTCGCACACGCGCGCCCGCCACTCCGAGACCGACAAGAGCGCCATGTTCCCCTGTGCCATGTGCGACCGGTTCTATACAAACAAGAAGAGCTTGCAGCGACACATTGAGATCTCGCATTGA
- Protein Sequence
- MSAKYERVCRLCLSSRGELLPIFPTTSSDDTGPPVLASKINECVSVQISENDELPTNVCRKCMDNVNNWHIFKSVCERTQNKLLSFIRKDGSQLEEVKVKSEPLSDEAYDDGVLIDGSYPDSEKSGPSSKIQPEGPPILASLGLTPRSDKNYVDPRMDWHRVHAILDMVQDDEVVDSLQSVEESDVLHDSDHDSDSETELQSEGDDDCLDSKENYFCKNGKTINKRPITNFSDTLEKIKVSTDLRKRKLVKKKPCSGPKEAWQLLFTDDLLEVIVAATNEYIAKKCLSSPTTVTEIKSLIGILYLHGIMRPTHQKREELWHSNTGLMCIKHVMTLARFNFLLENMRFFNDDYESSLLQLDTMKQMRKVFEIFAMNCRFSFETEENLVIDEIVVPVYGPCPFKYQFSKKLLKTGMKIVLLVDCNNFYVSNLDVITDPYFDSSEIVCKLVQHVVGTGKILTMDSWFTSTSLMQKLQHEYQLYSIAALNPKHDLIPLLFVCKSRKPKSTLTGYVDSNVTLTSYVNAESKALNVVTNDPRLYKRGGVESEKDEDDDEDEMNEPTTSFAKVPNMPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTSHSFDRYTNKITVKKSTTHMQPKLRPNPFNPKARLMPNPISHKMKLISKDTSTKMMTPMTPKMIAPPKPIPIKPSRTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVVVSEPEIMNSAPESPETLISEPEIASFQVETILSEPDTYDPHNSDEVDSEIHSNQHQHYDNDHQLYDNQNQHYDTVDMNSENEIEIAREKENDLEENDGENEVDGDEEMQQDDENNVEGNDEDEKAYESEGDNQDDEEGKVDDEIAPVVEINEEIQTNNSYNSEPNEDEEEELDASADVNESMDDEPIKELDPNKLYVTKTQRDFIDKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYNEDGITDDLVLEDEPKEEKVHQKDIFNARSYACKLCPAKFQLKQFIMKHVVDVHETGQPRVPLMCVHCGARFKERIMWKKHLRKAECTLCVSCDLCSERFGSVPDFNDHALAVHAGNFDQDNQIKRLDDRPTDCPICGKKNSNYTGLVKHLKIIHNEEKPHYCTHCDVKFELATELNQHLYLEHSDKTLGAQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQAHPGVGSFSQAESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRRPGEPKGFAPQIIGKPIKQFNMAQQFVYKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMHASTEEDEYNMDENGAILSTPQFNSFNFANNASTNHAPPPAPAQPEVYTCDLCYQRFSFRDSLRKHKRAKHGIINVPNNVDNQSSSTGGDGSRSSCTICKITFSDKKSYYRHRKNVHKSATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQDAEMDYEGEHDTVDSGVDYQARYPCDTCGKQFVGLLALQNHQCINQITSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDPVQLARVSHSAPPAAVAAAAGKRRLPPEVEVTVVNPNKKLRSDDSLEMDQLGAGTDDKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEDGEGGSSGAGALGPDSAESEDEAEAAPPPAEFTCAQCGDGVATPRDLLAHRTMHSTPSKYFCNICKVYFARALDLTSHTRARHSETDKSAMFPCAMCDRFYTNKKSLQRHIEISH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00209100;
- 80% Identity
- -