Badu013533.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- ZFY
- Assembly
- GCA_907269095.1
- Location
- OU026136.1:475384-477822[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.065 6.1 8.4 1.0 1 23 28 50 28 50 0.96 2 17 0.00013 0.012 16.8 1.0 2 23 57 79 56 79 0.92 3 17 4.7e-06 0.00044 21.4 0.3 3 23 87 107 87 107 0.99 4 17 4.3e-06 0.0004 21.5 0.2 1 23 113 135 113 135 0.98 5 17 6e-05 0.0056 17.9 1.6 1 23 141 163 141 163 0.98 6 17 0.025 2.4 9.6 5.5 1 23 178 200 178 201 0.93 7 17 1.2 1.1e+02 4.4 0.1 2 20 239 256 238 259 0.72 8 17 8.8e-06 0.00083 20.5 0.3 1 23 263 286 263 286 0.94 9 17 2.3e-06 0.00022 22.4 2.0 1 23 292 314 292 314 0.96 10 17 1.4 1.3e+02 4.2 1.5 1 21 320 340 320 342 0.92 11 17 5.1 4.8e+02 2.4 3.8 1 23 368 389 368 389 0.93 12 17 0.0083 0.78 11.2 2.1 2 23 534 556 534 556 0.94 13 17 0.00099 0.094 14.1 0.1 1 23 562 584 562 584 0.92 14 17 0.048 4.5 8.8 0.1 1 23 590 612 590 612 0.95 15 17 5.5e-05 0.0052 18.0 0.6 1 23 618 640 618 640 0.98 16 17 1.5e-06 0.00014 23.0 0.2 1 23 649 671 649 671 0.97 17 17 0.0024 0.22 12.9 0.4 2 23 680 704 679 704 0.95
Sequence Information
- Coding Sequence
- ATGCGCCGCGACCGCCTAGATTCAGAAACCCGCCGCGAGCTCGCCCTCGCGCGCTGCCGCGACGCCGCCGGCCGGCTGCGCTACGCCTGCGCGGTCTGCGGGAAGCGGCTCAGCTCCGCGCACACGTACCTGTTCCACCGGCGAATCCACACCGGGGAGCGGCCGTGCGTGTGCCACGTGTGCGGGAAGCAGTTCCGCGCGCCGGGCGGGCTGCGGCGGCACCTCGCCGAGACGCACGAGCGCCGCCGCCGCGTGGGCTGCCCCGACTGCGGCGGCACCTTCGCCAACGCGCAGAACCTGCGCCAGCACCGGCGCACGCACACCGGCGAGCGGCCCTTCGAGTGCGCGCTGTGCGGCCGCCGGTTCGCGCAGAGCGGCGCGCTGTACGCCCACCGGCGCACGCACGACGCGGCGCGCCCGCACCGCTGCCCGCACTGCCCCGCCGCCTTCCGCCTGCGGGCCGCGTTGGTGCGCCACCGCCGCCGCCACGAGGCCCCCGCCCCCGCGTCGGCCGCGGCGCCCGACCGCCCGCACGCCTGCGCGCTCTGCCCGGCTACGTTCCGGCTGCGCGCCGCGCTGACCCACCATCATCGTCGGCACCACGTCCCGCCCGCACCCGCCCCCGCGCCCGAGCCTGACAATGCCCAGAATACACCGCCGGCGGGCGCCGCGGCGGGAGGTCCGGCCGTCGCGGGAGACGGTAAGCGGTACGTGTCGTGTCCCGACTGCGGGCGGCGGGTGGCGGCGCGCGGCTGGCGGCGGCACCGCACCGCGCACTCGAAGCGGCACGCGTGTCCGCACTGCGGGCGGGCGTTCGGCGAGGCGGGGAACCTCGCGCGGCACATACGCGACACGCACCAGCAGGCCCGGCCGCACGCGTGCCCGCAATGCGGGAGGACGTTCGCCCGCCTCGCGCATCTCCAGGACCACACGCGGTCGCACGGCGAGCGGCGCGAGTTCGTGTGCGAGTGCTGCGGGCTCGCGACCAAGTCTGCGGCGGCGCTGCGCTCGCACGGCCGCTGCCACGGGGCCCCGCTGCGCTGCCCGCGCTGCCCGGCCGCGTCCCCCCCGCCCCCGCCGCCGCCGCCCGCGCACCTCCTCTTCCACTGCGAGGAGTGCCACACCTACGTCGACCAGAAGGACTTCGTGTTGCACATGTCGCAGCACGCCGTGCAGTACCAGCCGGCGTTCCCGGCCCCTCGGCAGACGCCCCCACCCCCTCTCAAAGGAGAGAAGGCCCCGCCCCCGCACCCGCCCCCGGCAGCGAAACCGAGGCGAGCCAAAAAGAAAGTGATGAAGGATGAAAACGAGAACACCGAGGTGAGCGCGAAGCCGACGCTCGACGAGCGCCCGCCGCCGTCGGAACTGCCGATCAAGAGCGATGTCGCGACCGACAGTGCCGAGCCGAGTCGACCGCCGACCGTGGACGAGTTTTCGGACCACAGCGACGCGGAGTTCGACCCCATCCCGGAATCCGTGTTCGAGGCTATAGAGGACTCGCGCGACGCGGGGCCCGCGCCCGACGGGGCGGGGGCGGCGGGGACCCCGACAGCATCCGAGGAGCCGGCACCATCCACCAAACGGCACCGCCGCGAGCGCTCGTGCCCCGTCTGCCACAAAGTCTACACGGCCTCCTCGAGCTACTTCTACCACGTGAAACACGCCCACTCGACGGTCCGCGAGCACGCCTGCGCCGAATGCGGGCGCGCGTTCGGGTCCCGCGGGCTGCTCAAGCAGCACGAGGTCGTGCACTCCGCCGAGCGCCCGCACGCGTGTGCCGTGTGCGGGGCGAAATTCCGCGCTCGCGCCGGCCTGTACATTCACGAGCAGTCGCACGGCGGGCCGCGATCGCACCGCTGCCCGATCTGCGGGCGCGCGTTCCGCTGGCGGACGGCTCTGGCCCGGCACGAGAGGCGGCACGAGGCGGCGGGCGGGGGCGGATCGCACGCCTGCCCGGAGTGCGGGCGAGCGTTCGCGGTCCGAGGGGACCTGCTGAGGCACCGGCGGACGCACGCCGCGGCCGTGGCGCCCGCGCTGCGCTGCCCGCACGCCGACTGCCGAGCGGCGTTCGCGCAGCCGAGGTACCTGCGCGTGCATTTGCAGAAGAGGCACGCCGGGCTGGAGCAGCCCCAGGAGACGGCCCCGGGCGAGCAGCAGCCGCCCCCGCCCCCGCCCCGGCCGCGCCGCCCCCGCAACCCTCACCCCCCAGTGAGGGACTGA
- Protein Sequence
- MRRDRLDSETRRELALARCRDAAGRLRYACAVCGKRLSSAHTYLFHRRIHTGERPCVCHVCGKQFRAPGGLRRHLAETHERRRRVGCPDCGGTFANAQNLRQHRRTHTGERPFECALCGRRFAQSGALYAHRRTHDAARPHRCPHCPAAFRLRAALVRHRRRHEAPAPASAAAPDRPHACALCPATFRLRAALTHHHRRHHVPPAPAPAPEPDNAQNTPPAGAAAGGPAVAGDGKRYVSCPDCGRRVAARGWRRHRTAHSKRHACPHCGRAFGEAGNLARHIRDTHQQARPHACPQCGRTFARLAHLQDHTRSHGERREFVCECCGLATKSAAALRSHGRCHGAPLRCPRCPAASPPPPPPPPAHLLFHCEECHTYVDQKDFVLHMSQHAVQYQPAFPAPRQTPPPPLKGEKAPPPHPPPAAKPRRAKKKVMKDENENTEVSAKPTLDERPPPSELPIKSDVATDSAEPSRPPTVDEFSDHSDAEFDPIPESVFEAIEDSRDAGPAPDGAGAAGTPTASEEPAPSTKRHRRERSCPVCHKVYTASSSYFYHVKHAHSTVREHACAECGRAFGSRGLLKQHEVVHSAERPHACAVCGAKFRARAGLYIHEQSHGGPRSHRCPICGRAFRWRTALARHERRHEAAGGGGSHACPECGRAFAVRGDLLRHRRTHAAAVAPALRCPHADCRAAFAQPRYLRVHLQKRHAGLEQPQETAPGEQQPPPPPPRPRRPRNPHPPVRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -