Badu025808.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- ZIPIC
- Assembly
- GCA_907269095.1
- Location
- OU026140.1:2969357-3008382[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.8 1.7e+02 3.8 0.7 1 23 330 352 330 352 0.96 2 21 0.00024 0.022 16.0 0.2 1 23 359 382 359 382 0.95 3 21 0.0014 0.13 13.6 2.6 1 23 413 436 413 436 0.97 4 21 0.0027 0.26 12.7 1.2 1 23 440 463 440 463 0.93 5 21 0.0011 0.1 13.9 0.1 2 22 476 496 476 500 0.93 6 21 0.086 8.1 8.0 0.4 2 23 525 547 524 547 0.96 7 21 0.00012 0.012 16.9 3.5 2 23 567 588 566 588 0.96 8 21 1.8e-05 0.0017 19.5 2.4 1 23 594 616 594 616 0.98 9 21 2.5e-07 2.3e-05 25.4 0.5 1 23 623 645 623 645 0.97 10 21 8.5e-05 0.0081 17.4 2.4 1 23 651 674 651 674 0.96 11 21 0.024 2.3 9.7 2.8 1 23 980 1002 980 1002 0.98 12 21 0.00056 0.053 14.9 1.5 1 23 1009 1031 1009 1031 0.97 13 21 0.43 41 5.8 2.4 1 23 1035 1057 1035 1057 0.95 14 21 0.0072 0.68 11.4 2.6 1 23 1062 1085 1062 1085 0.98 15 21 0.009 0.85 11.1 0.5 1 23 1089 1112 1089 1112 0.95 16 21 0.096 9.1 7.8 0.3 2 19 1125 1142 1125 1145 0.93 17 21 0.039 3.7 9.1 0.8 2 23 1184 1206 1183 1206 0.95 18 21 0.041 3.8 9.0 3.0 2 22 1224 1244 1223 1245 0.88 19 21 9.7e-06 0.00091 20.4 3.5 1 23 1251 1273 1251 1273 0.98 20 21 1.9e-06 0.00018 22.6 0.2 1 23 1280 1302 1280 1302 0.98 21 21 0.00052 0.049 15.0 1.3 1 23 1308 1331 1308 1331 0.91
Sequence Information
- Coding Sequence
- ATGGAGGTCTGCCGTATTTGCTTGGCGATAGACGCCAAGTTTTTCAGTACAAAACAGTATAACCTAGAATATTACTATGAAGAAATTACGGGATTGGTGGATGCAGATGAAAGGCTTCCAGGCCATGTTTGCTGGGAGTGCGCACACAAACTCGACAGCTTTTACAAGTTCAAGGAGAAAGCGATGAAGTGCCATGACCTCCTACAAGCTTTGCTTTACAAGAATCAAGATCTAAGCCTGAATGCCGTAACAATGGTTGATCGTAACTTGAATGGACTCGAGTCAGGCCTTTGCATATCAGAATCCGTTGTCATAGACAATATGGATACAGAAGAGATGGAGGCGATAATGAAAGCTAAGGAAACACGTAAACCTAGAAAGAGGGAGCTGTTGGCAACCAAAGTAGAGGTAATAGATGACTATCAGGAGCAAACCTTTAAAGTAGAGGATGAAAGCTACGTCGAGCTGGACAATGAAGAAGACTACGTAGAAAATGCAGAAGAATATTATGAAATACCAACGATGCAGACAACTGACCAAGAGCAAGAGCAATCCGTTAAAGTTGAAGACACCACTGAAATCGGTGACCAGCAGATATATTACTTCGATGTGTTGGACAATAACATCAACGAGAACAACGAAGAAGACCAAGTTTATCTGCAAGAAAGTATGGAGGAGGGTGTAGTTGCCGAGGAGACAGAGGCCTATATGGATGATAGTTCGTACTATGTTGATGGCACTGAGACAATGACTGATGACACAACAACACTGACTCATGTGGTGAACGAAATCGAGGAGTCGAGTGAAAATGATGAGGAGGAATCAGCGAATGAGAATGATATGTCCACTGAAATTGTGAGGGAAAGGGGTGGAAAGAAAAATACACCGACGGTTATTAATGAGCAGATGTTTGACGTGAAGACCTTGACAGTTGAGGAGCAGATTCAGGAGATTGAGAAACGCAAAGATCAGATGCTGGACAGGAAATATATCTGTCAGTTTTGTTATAAGGGGTATTTGGATGTTAATGCTTATGACAACCATATGAGGAGACATACAGAGGAAGCAGGCACCTACATGTGCGGCATCTGCAAGGTGCGGTTCCCGACGCGAGACAAGCTGCGGCGACACGTCGCCTCCGCACACACGTACAAGTTCTCCTGCAAGCAGTGCGCTTTCGTCACTACTAGGCGCCACGACGCGAAACATCACGAGGAGTTCCACAACGGGACGCTGTACCAGTGCCCGCACTGCAGCGAGAAGTTGACGAAGTACTCGTCGTACATGGCGCACATCCGCCAGCGGCACCCGTCGGAGTTCGTGTGCGTGCTGTGCGGACACTCCTTCGTCAGCTCCAAGGGACTCGCGCAGCATCTGGCGCACAAGCATCGCTTCGAGGAGCATACGGTGCCCCCGACGGGCCCCCGCTGCGACGACTGCGACGTGCGGTTCATTAGCGACAGCGCGCTGCAGAGACACCTCAAGGTGGCCGACCGGCATCGCCTCGGAATTAGAAGAGAAGGCGCGATATTCTTGAAAAGGAACAAGACGAAAAGTTTCCCTGAGCCAATACCCTGTGAACAATGCGACGAAATGCTCCGCGACTCTCGCACCTATTTCCTCCACTTTCGCAAGGAGCACCCGGATTGCAACCGCACGCGGTTCGACGCCGCGGCTCTCGCTGGTCGCGAGATGTGCATGTGCGACGTCTGCGGGAAGATGTACCAGAACCAGGCGCACCTCCGCGACCACATGTTCACCCACACCGGCGAACGGACATTCAAATGTCCGCATTGCGACCGCACCTACAATCGGCGGTACGCGATGCTGGTACACATAAGGCAGCATGATGAACAGAGAAGGCAGTACGTGTGCAAGCTGTGCGGGAAGAACTTCGCCAACCCGAGCAACCTGAATCGGCATAAATCGGTGCACACAGGGCTCCGGCCGCACAAGTGCGAGCACTGCGGGAAGGCGTTCAAGCAGGCGCTGGAGATGCGCTCGCACATCAACTACGTGCATCTGAAGAAGCCGTGGCCGAAGCGGATCCGGCCCAAGGTGCGGATCCGCACGAGGCAGGCGAAGATGGAGGAGGATGATGATGCTTGCCGGGTGTGTCTAGAGTCTGACTCTAAATTATATGACATGAAAGAACAGAATTTGGAGCATAACTATGAAGAATTGATTGAATTAAATATAAATACAGACCACAGACTACCGCAGGCTCTGTGTTGGGAGTGCGCGAGGCGGCTGTGCGATTTCAAGAAGTTCAAAACCAAAGCACTGAGATGCCACGAGCTCATGATGGATATGTTGGCTTTGAATGGCGAGTTCGTGCTGAACAGACTGATCGACCGCTACGCGAACGGCATAGCATCCTCGCTGGGCCGCACCACCATGCTAGCGTTAGACAACTTCGAGCCACCATCTGAAGACGACAAGTTTATCACAAATCAAATAGAGAAAATACCGGACAGCAATGTGATATTCATAGACGATAAGAAAGTTAAACAGGAAACGGATTCCGATGTCGACAATGGCATACACGAGGTGACAATAACTGTGAAGGATGAGGATTTGAGTTTCGTGAATGAAAATGAAAATGATACTACTCAGGACAGCTTTAACGACGAAAACTTTCAAGACCAAGAAGAGGAGGACGAAGACTTCACACTATCGGATAGCGTCAAAAGTGAGCCGGTTAGGAAGAAAAGGAAGGTTACAACGAAGAAGGCGAAAACGAAATCGAAGAAGACCGAGAAATCGAAAAAGAAAGCCAGCATAGCAGAGAAACCTGCCGAAAAAGTTGACAGACGTATCAAGCCAGTACACGAAGTTGTCAATACAGATATGTTTGACATAATAGCGTTGACAATGGAGGAGCAATACGCTGAGATAGAGAAGAGAAAAGAGACGTCCAACTACAAAAATTCCGAGTTCAAATGCGAGAAGTGTTTCAAAGGGTTCAGGGATGAGGAAGCCCATAAGACCCACATGGCGAGGCATAGTGATCTAGCTGGGAAGTATGAGTGTGATATATGCAAGATGAGGTTTGCTAAACGACACACTCTGTTGCGACACGCGATCTCTCATACGCATAAGTACACTTGTAAGGAATGCAACTTTGTTGGGACTAGAAGACACGACGCGAAACTGCACGAACAGTTCCACAACGGTACCAAATACCAGTGTCCACACTGTCAACTGGACTTTGGCAAATACACATCGTACATGAGCCACCTCCGCATAAAGCACCCGTCGGACTTCGTGTGCGGCTTCTGCGGGAACTCCTTCGTAAGCCAGAAGGGGCTCGACCAGCACAAGAACTTGAAACATCGCTTCGACGAGCAACAGATCCCAGAGAACGGCCCGTACTGCGAGAAGTGCGAGCTTCGCTTCGCCACAGAAGAGGCGCTGCACAAGCACTTCGAACTCTCGGAGAGGCATAAGGACACCCCCGAAGCGGCGGAGGAGGTGAAGCGGAAGGCGTTACTTAAGAAGCAGGCGGAAGGCGGCGTCAAGCGACGGAAATACAAGGGGGAGCCCATACAGTGCGAGAGGTGCGACAAGCAGCTGGCGACCCCGCACGCGTACAACAGCCACTTCCGGCTGGAGCACCCGGGGAAGAACCGGACGCACTTCCCGTCCAAATCCTACAAGGCCAAATGCATGTGCGAGGTGTGCGGACGGATATTCCAGAACCACACCCAACTGAAGGACCACAGCTTCGCCCACAGCGACACCAAGCAGTTCGAGTGCGAGCATTGCGGGAAGACCTTCCAGAGACGATACAGGCTTCTAGTCCACCAGAGGATGCATGAGGAAGTAAGGCTACGCTACCCGTGTGCTGTGTGCGGGAAGCGATTCGCCAACCGGAGCAACGTGAACCGACATGTTAAGATCCACTCAGGCCTGAAGCCCTACAAATGCGAGACATGCGGCAAGGGGTTCTCCAACTCTGGCGACAGGAGGAACCACTTCACGTACGTGCATCTCAAGAAGCCTTGGCCCAAACGGAACAGGGACAAGCGAAGAGGTGATGGGATGATGGGGGCGGATTTTGGTGTGAACCCACAACACCAGTTGCTGCTCTCGTCAGCTGATCTCCACATGATGCCACCAATGTGA
- Protein Sequence
- MEVCRICLAIDAKFFSTKQYNLEYYYEEITGLVDADERLPGHVCWECAHKLDSFYKFKEKAMKCHDLLQALLYKNQDLSLNAVTMVDRNLNGLESGLCISESVVIDNMDTEEMEAIMKAKETRKPRKRELLATKVEVIDDYQEQTFKVEDESYVELDNEEDYVENAEEYYEIPTMQTTDQEQEQSVKVEDTTEIGDQQIYYFDVLDNNINENNEEDQVYLQESMEEGVVAEETEAYMDDSSYYVDGTETMTDDTTTLTHVVNEIEESSENDEEESANENDMSTEIVRERGGKKNTPTVINEQMFDVKTLTVEEQIQEIEKRKDQMLDRKYICQFCYKGYLDVNAYDNHMRRHTEEAGTYMCGICKVRFPTRDKLRRHVASAHTYKFSCKQCAFVTTRRHDAKHHEEFHNGTLYQCPHCSEKLTKYSSYMAHIRQRHPSEFVCVLCGHSFVSSKGLAQHLAHKHRFEEHTVPPTGPRCDDCDVRFISDSALQRHLKVADRHRLGIRREGAIFLKRNKTKSFPEPIPCEQCDEMLRDSRTYFLHFRKEHPDCNRTRFDAAALAGREMCMCDVCGKMYQNQAHLRDHMFTHTGERTFKCPHCDRTYNRRYAMLVHIRQHDEQRRQYVCKLCGKNFANPSNLNRHKSVHTGLRPHKCEHCGKAFKQALEMRSHINYVHLKKPWPKRIRPKVRIRTRQAKMEEDDDACRVCLESDSKLYDMKEQNLEHNYEELIELNINTDHRLPQALCWECARRLCDFKKFKTKALRCHELMMDMLALNGEFVLNRLIDRYANGIASSLGRTTMLALDNFEPPSEDDKFITNQIEKIPDSNVIFIDDKKVKQETDSDVDNGIHEVTITVKDEDLSFVNENENDTTQDSFNDENFQDQEEEDEDFTLSDSVKSEPVRKKRKVTTKKAKTKSKKTEKSKKKASIAEKPAEKVDRRIKPVHEVVNTDMFDIIALTMEEQYAEIEKRKETSNYKNSEFKCEKCFKGFRDEEAHKTHMARHSDLAGKYECDICKMRFAKRHTLLRHAISHTHKYTCKECNFVGTRRHDAKLHEQFHNGTKYQCPHCQLDFGKYTSYMSHLRIKHPSDFVCGFCGNSFVSQKGLDQHKNLKHRFDEQQIPENGPYCEKCELRFATEEALHKHFELSERHKDTPEAAEEVKRKALLKKQAEGGVKRRKYKGEPIQCERCDKQLATPHAYNSHFRLEHPGKNRTHFPSKSYKAKCMCEVCGRIFQNHTQLKDHSFAHSDTKQFECEHCGKTFQRRYRLLVHQRMHEEVRLRYPCAVCGKRFANRSNVNRHVKIHSGLKPYKCETCGKGFSNSGDRRNHFTYVHLKKPWPKRNRDKRRGDGMMGADFGVNPQHQLLLSSADLHMMPPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -