Badu017430.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- ZNF532
- Assembly
- GCA_907269095.1
- Location
- OU026141.1:5948808-5955080[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.19 18 6.9 0.2 2 23 2 23 1 23 0.95 2 18 0.00016 0.015 16.6 0.3 1 23 27 49 27 49 0.98 3 18 0.0015 0.14 13.5 0.2 1 20 54 73 54 74 0.94 4 18 0.03 2.8 9.4 1.8 2 23 87 109 86 109 0.96 5 18 2.1e-05 0.002 19.3 0.6 1 23 116 139 116 139 0.98 6 18 0.0005 0.048 15.0 2.8 1 23 145 167 145 167 0.97 7 18 2.4e-07 2.3e-05 25.4 0.7 1 23 173 195 173 195 0.99 8 18 0.00034 0.032 15.5 1.7 1 23 201 224 201 224 0.98 9 18 0.0017 0.16 13.3 0.6 2 23 227 249 226 249 0.96 10 18 0.012 1.1 10.7 0.5 2 23 276 298 275 298 0.95 11 18 0.073 7 8.2 0.2 2 23 322 343 321 343 0.96 12 18 0.00035 0.033 15.5 0.4 1 23 347 369 347 369 0.98 13 18 0.00042 0.039 15.3 0.4 1 20 374 393 374 394 0.95 14 18 0.0029 0.28 12.6 0.5 2 23 406 428 406 428 0.92 15 18 4e-06 0.00037 21.6 0.4 1 23 435 458 435 458 0.98 16 18 3.6e-05 0.0034 18.6 2.1 1 23 464 486 464 486 0.97 17 18 4.3e-07 4.1e-05 24.7 1.5 1 23 492 514 492 514 0.99 18 18 0.00054 0.051 14.9 4.5 1 23 520 543 520 543 0.96
Sequence Information
- Coding Sequence
- ATGAGTTGTGCTCTATGCAGCGCCACTTTCGAGGCGTTCAAAACGTTGTTGCAACATATGAATGGACATTACAGGAATTTTATATGCCAGGAATGCGATATCGGCTTCATAACCGAGACCAGGTTGACGAAGCATCAGGAAACCCACAGGACAGGCACTTTTACATGCTCGTTCTGTACTAAAGTGTTCCCAACTGCGGTGAAGTTAATGAGTCACGAGAACTGCTTTCATAAGAACCCGATCAAGGTCCGACGCAAAAAGTGTCCCCTATGTGAGATGACATTCCCGAGCTACTGTGCCAGGAATAGACACTTATTGAAAGAACACAAATCCTCTGCTTCCACCTACAAGTGCAGTATATGCGATACAATATTCACATTGAAGGTGCAGCTCTCGACTCATGTAAGAAAAGTGCATCTAATCGAGAAAGACCACAAATGCCCCGAGTGTGGGGACGGTTTCTTTACGAACTGTGCACTGAAGCGACATATGGTCCGGCATAATGGCGAGAGGATCTACGAATGTACAGAGTGTAACAAAGCTTACGCTCGAAAGACGACCCTCAGGGAACATATGAGGATACATAACAACGACAGGCGGTTTAAGTGTGAACTGTGTGGTTTGGCGTTCGTCCAAAAGTGCACTATGAAGAGTCATGTGTTGACCAACCATGGCATCCAATGCTGTTACTGCGAAGCGAACTTCTCTAACTTGGCTTCTTGGAGGGAGCACATGCAGTCGATACACAGCAACGACGAGTATCGTGCAATTAAATTATTTAAGAAACACGCCCACATCGCATTCAAAATGGACACAACAGACCTAAAATGCAACTTCTGCGAGCAGAACTTTGATATATTATCGAGTTTGAAGGAACACCTAACTAGCGAGCATGACGTGAAATTCATCCCCGAAGAGAAAAATTACGTTATCGAGTTCAAGCTGAGCGACAGCGATGTTATGAGCTGTGCTCTATGCAGCGCCACTTTCGAGGCATTCAAGACTTTGTTGCAACATATGAACATTCACTACAGGAATTTTATATGCGAGGAATGCGATGCTGGGTTTGTAAACGAGCACAGGTTGATAATGCATCAGAAAACCCACAGGATAGGCACTTTTCAATGCTCGTTCTGTCCTAAAGTGTACTCTACATCTGTGAGGCTGGAGCGTCATGAGAACTGCTCTCATAAGAACCCGAACGGGAATCAACGCAGATGTCCCCTCTGTGAGAAGACATTCACGAGCTACTATGTCAGGAATAGACACATATTGGACGACCACAACTCCTCTGCTACCACATACAAGTGCAGTATATGTGATAAAATATTCGTATTGAAAATGGATCTCTCGAATCATATAAGAAAAGTTCATTTAATGGAGAGGAACCACAAATGTTCTGTTTGTGGAATGGGTTTCTTCTCAAGAAGGGCATTGAAGAGGCATATGGTCCGGCATAATGGCGAGAGGATCTACAAATGTACAGTGTGCAACAAAGCTTACGCCCGAAAGTTCACCCTCAAAGAACATATGAGAATACACAACAACGACAGGCGGTTTAAGTGTGAACTGTGTGGTTTCACGTTCGTCCAAAAATGCAGTATGAAGAGTCATATGTTCTCCAATCATGGTGTAGTTTTAGCGGAATTTGAACAAGCGATGCTGAATGCAACGGTCTAG
- Protein Sequence
- MSCALCSATFEAFKTLLQHMNGHYRNFICQECDIGFITETRLTKHQETHRTGTFTCSFCTKVFPTAVKLMSHENCFHKNPIKVRRKKCPLCEMTFPSYCARNRHLLKEHKSSASTYKCSICDTIFTLKVQLSTHVRKVHLIEKDHKCPECGDGFFTNCALKRHMVRHNGERIYECTECNKAYARKTTLREHMRIHNNDRRFKCELCGLAFVQKCTMKSHVLTNHGIQCCYCEANFSNLASWREHMQSIHSNDEYRAIKLFKKHAHIAFKMDTTDLKCNFCEQNFDILSSLKEHLTSEHDVKFIPEEKNYVIEFKLSDSDVMSCALCSATFEAFKTLLQHMNIHYRNFICEECDAGFVNEHRLIMHQKTHRIGTFQCSFCPKVYSTSVRLERHENCSHKNPNGNQRRCPLCEKTFTSYYVRNRHILDDHNSSATTYKCSICDKIFVLKMDLSNHIRKVHLMERNHKCSVCGMGFFSRRALKRHMVRHNGERIYKCTVCNKAYARKFTLKEHMRIHNNDRRFKCELCGFTFVQKCSMKSHMFSNHGVVLAEFEQAMLNATV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -