Basic Information

Insect: Blastobasis adustella
Gene Symbol: -
Assembly: GCA_907269095.1
Location: OU026143.1:5646257-5652602[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.3e-07 6.9e-05 23.9 0.6 1 23 205 227 205 227 0.98

2 14 0.00057 0.054 14.8 0.2 1 23 233 256 233 256 0.93

3 14 3.8e-05 0.0036 18.5 0.6 1 23 262 284 262 284 0.98

4 14 1.5e-05 0.0015 19.8 5.3 1 23 288 310 288 310 0.99

5 14 3.4e-06 0.00032 21.8 2.9 1 23 316 338 316 338 0.99

6 14 7.9e-07 7.5e-05 23.8 1.1 1 23 344 367 344 367 0.95

7 14 6e-06 0.00057 21.1 2.9 1 23 373 395 373 395 0.98

8 14 1.5e-05 0.0015 19.8 1.2 1 23 401 423 401 423 0.98

9 14 0.00031 0.029 15.7 1.5 1 23 429 451 429 451 0.99

10 14 1.8e-07 1.7e-05 25.9 0.6 1 23 457 479 457 479 0.98

11 14 1.6e-07 1.5e-05 26.0 1.4 1 23 485 507 485 507 0.99

12 14 0.077 7.3 8.1 2.4 1 23 513 532 513 532 0.94

13 14 1.3e-06 0.00012 23.1 2.0 1 23 537 559 537 559 0.98

14 14 0.00047 0.045 15.1 1.3 2 21 566 585 565 586 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.3e-07	6.9e-05	23.9	0.6	1	23	205	227	205	227	0.98
2	14	0.00057	0.054	14.8	0.2	1	23	233	256	233	256	0.93
3	14	3.8e-05	0.0036	18.5	0.6	1	23	262	284	262	284	0.98
4	14	1.5e-05	0.0015	19.8	5.3	1	23	288	310	288	310	0.99
5	14	3.4e-06	0.00032	21.8	2.9	1	23	316	338	316	338	0.99
6	14	7.9e-07	7.5e-05	23.8	1.1	1	23	344	367	344	367	0.95
7	14	6e-06	0.00057	21.1	2.9	1	23	373	395	373	395	0.98
8	14	1.5e-05	0.0015	19.8	1.2	1	23	401	423	401	423	0.98
9	14	0.00031	0.029	15.7	1.5	1	23	429	451	429	451	0.99
10	14	1.8e-07	1.7e-05	25.9	0.6	1	23	457	479	457	479	0.98
11	14	1.6e-07	1.5e-05	26.0	1.4	1	23	485	507	485	507	0.99
12	14	0.077	7.3	8.1	2.4	1	23	513	532	513	532	0.94
13	14	1.3e-06	0.00012	23.1	2.0	1	23	537	559	537	559	0.98
14	14	0.00047	0.045	15.1	1.3	2	21	566	585	565	586	0.93

Sequence Information

Coding Sequence: ATGAGTGATACGTGGGTCGACAACGGCTTCTGTCGTTGCTGCCATTCCGAGGGACAATTCAAAAGTCTCGGAGTTGCTTTTTCCTTTGAAGGGAACCGTGAAATCTACTCTGTACTTTTACGCGAAACTTTCGACATCGTTATAACTCCAATGGCAGACAATAGCAGTGAAACATACACCATATGCGAAGTGTGTGTGCCGCGCCTGCGGGACGCAGCACAGTTCCGACAGCAGGTTCAGCAGTGCGAAGCCACTTTAGGAGAGTTCTATACCCGATATTTGGCTAGAAAAGACCTTCTGTTGTTGTCCACGCGAAGGCTCGAAGAACGTTTTTCGCTCACACAATACGGATGTGGAAGTAGAGCAAGCGGGTCAGAAATAAAGAGAGAAAATGAAGCTTATCCGGGAGATACCAATCAAGATGATAGAAGCGGTGACGAGGACAATGAAGGCCAGAGTTCACCAATGGGGATATACATGCAACAGGATGACCTAGACGACCAACCTTTGTCAGTACTGGTGGGTCAGAAGCGAGGTGATGATGAGGAGCAGGAATCGGCAGATTGGGCTGATCAGGCAGACGAGCCCGAACGCAAGACTCGAACCAAGAAATTCTCCTGCGAGATTTGTTCAAAGAAATTCTCATACAACGGCTCTCTGGAAGTCCACATGAAGGTACATACCGGTGAGAAAACCTACCCATGTCTCCTTTGCAACATAAAGTACGCTAGAAACAAGGATTTGACGAAACACATCGCTGACAACCATTCTGACGGCGACAAGTATCCTTGCAAAATATGCAACAACTCCTTCGAGAAACCAAGGCAGTTGAAAACGCATCTTGTGACCCATTTCGTCGAGTTCAAATGCAGTCATTGCGACAAACTGTTCCAAAGAAAGAAGGGATTGAAGGAACATATGAAGACGCATACGGGGGAACGGAAATATACTTGTAATATATGTCAGAAGTCCTTCGGACACAACCAGACGTTGAAGAGTCATATATTGACGCATACTGGAGAACGTCCTTACGTATGCGACGTCTGTGGTCGCAGATTCCCGCAGCGGACGCATTTGAAGCGTCACATATTCATTATCCATACAGGTGTCAAACCATACTCTTGCAATATATGTCAGAAGCATTTCTCCAGCAAAAGTTACTTGGCAATTCACGAGAGGCAGCATACGGGTGAGAAACCTTTCTCATGCGAGGTTTGCAAGAAGAATTTCACAGCGTACACCACTTTGAAAGTCCATATGCGCGTCCATACTGGTTTCAAACCTTACTCGTGCAGTTTTTGCGACAGACAATTCGCTCAGATGGCCAGTTTTAAGCTCCACGAGCGTACTCATACAGGGGAACGGCCGTTTTCATGTACAGTGTGCAAGAAACCATTCTCGGATAATGGTTACTTGAAGATTCATATGCGAGTCCATTCCGGGGAAAAGCCCTATGAGTGTGAGACTTGCAAACGTAGCTTCAGGGAGAGTGGACAACTCAAACGACATATGAGAGTCCATACCGGTATCAAACCGTACTCCTGCAAGATTTGTAATAAGCAAATCGGGAATCTATCGAAACATATGAGGGTACATTCCGAAGAGAAATATCATTGTAGCGTCTGTAATAAACAGTTTTCTGTCAACGGGAACCTGAAATTGCACATGAGAATACATTCCAGTGATAAAACCCTTACTTGTGATCAATGTAATGCTAATTTCTCTCAAAGCAGTGGTCTGAAGAAACATAGGTGTATTGGCGGTAAAAATGCGAATCCATTATGA
Protein Sequence: MSDTWVDNGFCRCCHSEGQFKSLGVAFSFEGNREIYSVLLRETFDIVITPMADNSSETYTICEVCVPRLRDAAQFRQQVQQCEATLGEFYTRYLARKDLLLLSTRRLEERFSLTQYGCGSRASGSEIKRENEAYPGDTNQDDRSGDEDNEGQSSPMGIYMQQDDLDDQPLSVLVGQKRGDDEEQESADWADQADEPERKTRTKKFSCEICSKKFSYNGSLEVHMKVHTGEKTYPCLLCNIKYARNKDLTKHIADNHSDGDKYPCKICNNSFEKPRQLKTHLVTHFVEFKCSHCDKLFQRKKGLKEHMKTHTGERKYTCNICQKSFGHNQTLKSHILTHTGERPYVCDVCGRRFPQRTHLKRHIFIIHTGVKPYSCNICQKHFSSKSYLAIHERQHTGEKPFSCEVCKKNFTAYTTLKVHMRVHTGFKPYSCSFCDRQFAQMASFKLHERTHTGERPFSCTVCKKPFSDNGYLKIHMRVHSGEKPYECETCKRSFRESGQLKRHMRVHTGIKPYSCKICNKQIGNLSKHMRVHSEEKYHCSVCNKQFSVNGNLKLHMRIHSSDKTLTCDQCNANFSQSSGLKKHRCIGGKNANPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -