Badu030128.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026129.1:739805-743155[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 1.7e-06 0.00016 22.8 0.3 3 23 329 350 327 350 0.98 2 27 6.9e-05 0.0065 17.7 1.2 1 23 356 378 356 378 0.94 3 27 0.0012 0.11 13.9 2.6 3 23 386 407 384 407 0.96 4 27 8.7e-05 0.0083 17.4 1.9 1 23 413 436 413 436 0.96 5 27 1.7e-06 0.00016 22.8 0.4 3 23 445 466 443 466 0.96 6 27 0.0017 0.17 13.3 3.7 1 23 472 494 472 494 0.94 7 27 2.8e-05 0.0027 18.9 1.3 1 23 500 523 500 523 0.97 8 27 0.001 0.097 14.0 0.1 1 23 529 552 529 552 0.96 9 27 0.0041 0.39 12.1 0.1 3 23 560 581 558 581 0.93 10 27 0.00013 0.013 16.8 0.1 1 23 587 610 587 610 0.97 11 27 0.0018 0.17 13.3 0.3 3 23 618 639 616 639 0.96 12 27 0.00041 0.039 15.3 0.1 1 23 645 668 645 668 0.96 13 27 7.8e-05 0.0074 17.5 0.2 3 23 676 697 674 697 0.96 14 27 6.1e-06 0.00058 21.0 0.7 1 23 703 726 703 726 0.97 15 27 3.6e-05 0.0034 18.6 0.4 3 23 735 756 733 756 0.94 16 27 0.0016 0.15 13.4 4.7 1 23 762 784 762 784 0.94 17 27 2.4e-05 0.0022 19.2 1.1 1 23 790 813 790 813 0.97 18 27 0.001 0.097 14.0 0.1 1 23 819 842 819 842 0.96 19 27 0.0037 0.35 12.3 0.0 3 23 850 871 848 871 0.94 20 27 0.00013 0.013 16.8 0.1 1 23 877 900 877 900 0.97 21 27 0.00033 0.031 15.6 0.2 3 23 908 929 906 929 0.96 22 27 0.00027 0.026 15.9 0.1 1 23 935 958 935 958 0.97 23 27 0.00051 0.048 15.0 0.7 1 23 964 987 964 987 0.96 24 27 0.00017 0.016 16.5 0.3 1 23 993 1015 993 1015 0.98 25 27 7e-05 0.0066 17.7 1.4 3 23 1023 1044 1021 1044 0.94 26 27 8.1e-06 0.00077 20.6 0.2 1 23 1050 1072 1050 1072 0.97 27 27 1.9e-05 0.0018 19.5 3.0 1 23 1078 1101 1078 1101 0.97
Sequence Information
- Coding Sequence
- ATGCAACAAACGGAGGAACTGCGCGCGTGCCGGGCGTGTATGGCTACGAACTGCGAGTTACACGAACTCGAGGAAAATGGACTTGCCGAGAAGTTTCAGCAAGTGACATCGTTGAAGCATTGTTTAATTAATGGCATGCCAAAGTATATTTGCAGTTTCTGCCGCGCTCTGCTGGTAAAGGCCTACCGGTTCCGCTTAAAGTGCTTGGAGACCGATAAAGCTATGTTACAAAATGCTTTAGGCCAGAATATACGCTTTGGAAAGAAAGCCTACTGGTGGCATGAATTGAACCTATCAGAAAGGCTGGTCATTTCATGTGGTGGACTAAATGAATATATCAAGAATGAAGATGACGTAGCACTGAAAGAAGAACCGGCAGAGCTAGAACATTTGCAACATGTTAATGGATACATCATAAATGAACCTCTCAAAGCTGTAGACATCAAATACAATGATCAAGTAATTTCAAATGATAAGAGTTATAAATCAAATGTATTGAGTAATGCATGTCGAGGTGTAAATAAATTAGCTACGACTGTTGATCCAACAGGGCTAATACAATCAGAATATAATATTAAAACCAAGGGTTTGTCTAACAATGAGCTTAAGGGGCATTTAATAAGATCCAATGACTCACATGAATCGTTTAATAAAGATACAATCCATAATACAGAAGCACATTCTTTGGAAAGAGTTGAAGAGAATGTCAATGCAATAGATATCCATAACATAGAAGAGATAATCCACTATACAGAAGTAGATTTTTTGGATGAAGTTCAAGAAGATGTTAATGCAATAGATATTCATGATATCAATGAGTGTTTTTATGAAGAGACAGTTCACAATACAGAAGTAGATCTTTTGAAAAAAGAAGAAAATACAGTGAAAAGACTAAAATCTGTAGCTACTATGAATGAGAGTGATATAACTAAAAGAAACTATTGTAAGAATGTACCCATGGGTATAGGAGACCATCCCTTTGGTTGTGACATTTGCGGCAAGATGTTTAAGACTCGGACCAATATCCAGGCCCATATTAGAACGGTACACAGTGAGGAGCAGCGTTATTCCTGTGAGCAGTGTGGCAAGGCATTCAAATTGCCACACTTGTTAAAGAGACACAATGTGATGCATACAGGCGAACTTAGCTTTGGTTGTGACATGTGCGGCAAGATGTTTAAGAGGAAAGGCTGCAAACAAATGCATATTAGGAATGTACACAGCGAGGCGCAGTCTCATCCCTGCTCGCAGTGCGGTAAGGTCTTCAAATCGACCCGCTACTTAATGGGTCACCAAAAACGTGCACATAATATATACAAAGGTTCCTTCGGTTGTGAAATCTGCGGCAAGATGTTCAAATCTAAGACTAATCTCCAGGTCCATATAACAAGGGTTCATAGCGAGCGAGGCTCTTATCTATGCGCGCAGTGCGGCAAGGCCTTCAGGCTGCTGTGCCACTTAAAGAAACACCAACTGGAACATAGAGTCGACCATCCCTTCAGCTGTGACATCTGTGGCAAAATGTTCAAGAGTAGGAACGGGGTCCAGATCCATATTAGGCATCAACATAGGGAGGCACAGGCTTATCCCTGCACACAGTGCGGCGAGGTCTTCAAATGGCTGAGCAAGTTAATAGTTCACCAAAAACAGGTACATACAGTTGAACGACCCTACGGTTGTGCCATCTGCGACAAGGTGTTCCAGAGTAGGGACGAGGTCCAGATCCATATTACTCAGCTACACAGCGAAGCGTGGCCTTATCCGTGCGTGGAGTGCGGCAAGCTCTTCAAATTGCCGGACACTTTATTGGCTCACCAAAAACGAATGCATACAGGCGGACGTCTCTTCGGTTGTGAAAACTGCGGCAGGATGTTCAAGAGTAACAGAGAGGTCCAGCTTCATGCTAGGCAGGTACACAGCACGGCGCGGCCTTATCCCTGCGCGCAGTGCGGCAAGGTCTTCAAATATCCGATTGTCTTAATGGCTCACGAAAAACGGATGCATACAGGCGGACGTCTCTTCGGTTGTGACATCTGCGGCAAGATGTTCAAGAGTAACAGTGAGGTCCAGCTTCATGCTAGGCAGGTACACAGCGAGGCGCGGCCTTATTCCTGCGCGCAGTGCGGCAAGGCCTTCAAATCGACCCGCAACTTAATGGATCACCAAAAACGTGCACATAATATATACAAAGGTTCCTTCGGTTGTGAAATCTGCGGCAAGATGTTCAAAACTGAGACTAATCTCCAGGTCCATTTTACAAGGGTTCATAGCGAGGGAGGCTCTTATCTATGCGCGCAGTGCGGCAAGACCTTCAGGCTGCTGTGCCACTTAAAGAAACACCAACTGGAACATAGAGTCGACCGTCCCTTCAGTTGTGACATCTGTGGCAAAATGTTCAAGAGTAGGAACGGGGTCCAGATCCATATTAGGCATCTACATAGGGAGGCACAGGCTTATCCCTGCACACAGTGCGGCGAGGTCTTCAAATGGCTGAGCAAGTTAATAGTTCACCAAAAACAGGTACATACAGTTGAACGACCCTACGGTTGTGACATCTGCGGCGAGGTGTTCCAGAGTAGGGACGAGGTCCAGATCCATATTACTCAGCTACACAGCGAAGCGTGGCCTTATCCGTGCGTGGAGTGCGGCAAGCTCTTCAAGTTGCCGGACACTTTATTGGCTCACCAAAAACGGATGCATACAGGCGGACGTCTCTTCGGTTGTGACATCTGCGGCAAGATGTTCAAGAGTAACAGAGAGGTCCAGCTTCATGCTAGGCAGGTACACAGCGAGGCGCGGCCTTATCCCTGCGCGCAGTGCGGCAAGGCCTTCAAATTGCCGAATGTCTTAAGGGATCACCAAAAACGGGTGCATAAAGGGGAACGGTTATTCTGTTGTGACATCTGCGGTAAGTTGTTCAAGGCTAAGGGCGATGTCAAGGTCCATATTAGGCAGATACACAGCGAGGCGCGGCCTTATCCCTGCGAGCAGTGCGGCAAGACCTTTAAAATGGCGTACATCTTAAAGGGGCACCAACGGGTGCATACAGACGAACGTCCCTTCGGTTGTGACATCTGCGGCAAGATGTTCAAGACTAAGAAAACTATGCAGAAACATACTTTGCAGCTACACAGTGAGGAGCAGCCTTATCCCTGCGCGTTGTGCGGCAAAGCCTTCAAATTGTCGTCCACATTAAGGAGACACCAAGTGGTGCATACAGGCGAACGCCCCTTCAGCTGTGACGACTGCGGCAAAACGTACAAGACAAAGTGTGATATGCGAACACACATCATTACTTCTCACATGAACAGACTTAGGTCTAAGCGGATTAAGAAAAAAACAATAGGGTGA
- Protein Sequence
- MQQTEELRACRACMATNCELHELEENGLAEKFQQVTSLKHCLINGMPKYICSFCRALLVKAYRFRLKCLETDKAMLQNALGQNIRFGKKAYWWHELNLSERLVISCGGLNEYIKNEDDVALKEEPAELEHLQHVNGYIINEPLKAVDIKYNDQVISNDKSYKSNVLSNACRGVNKLATTVDPTGLIQSEYNIKTKGLSNNELKGHLIRSNDSHESFNKDTIHNTEAHSLERVEENVNAIDIHNIEEIIHYTEVDFLDEVQEDVNAIDIHDINECFYEETVHNTEVDLLKKEENTVKRLKSVATMNESDITKRNYCKNVPMGIGDHPFGCDICGKMFKTRTNIQAHIRTVHSEEQRYSCEQCGKAFKLPHLLKRHNVMHTGELSFGCDMCGKMFKRKGCKQMHIRNVHSEAQSHPCSQCGKVFKSTRYLMGHQKRAHNIYKGSFGCEICGKMFKSKTNLQVHITRVHSERGSYLCAQCGKAFRLLCHLKKHQLEHRVDHPFSCDICGKMFKSRNGVQIHIRHQHREAQAYPCTQCGEVFKWLSKLIVHQKQVHTVERPYGCAICDKVFQSRDEVQIHITQLHSEAWPYPCVECGKLFKLPDTLLAHQKRMHTGGRLFGCENCGRMFKSNREVQLHARQVHSTARPYPCAQCGKVFKYPIVLMAHEKRMHTGGRLFGCDICGKMFKSNSEVQLHARQVHSEARPYSCAQCGKAFKSTRNLMDHQKRAHNIYKGSFGCEICGKMFKTETNLQVHFTRVHSEGGSYLCAQCGKTFRLLCHLKKHQLEHRVDRPFSCDICGKMFKSRNGVQIHIRHLHREAQAYPCTQCGEVFKWLSKLIVHQKQVHTVERPYGCDICGEVFQSRDEVQIHITQLHSEAWPYPCVECGKLFKLPDTLLAHQKRMHTGGRLFGCDICGKMFKSNREVQLHARQVHSEARPYPCAQCGKAFKLPNVLRDHQKRVHKGERLFCCDICGKLFKAKGDVKVHIRQIHSEARPYPCEQCGKTFKMAYILKGHQRVHTDERPFGCDICGKMFKTKKTMQKHTLQLHSEEQPYPCALCGKAFKLSSTLRRHQVVHTGERPFSCDDCGKTYKTKCDMRTHIITSHMNRLRSKRIKKKTIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -