Badu001637.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- SMARCC2
- Assembly
- GCA_907269095.1
- Location
- OU026114.1:5903251-5925577[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4 1.3e+04 -2.8 0.0 33 44 121 132 118 133 0.84 2 2 1.4e-14 2.4e-11 44.4 0.1 3 44 538 579 536 581 0.95
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACACGAAGCCCGGCGGCTCGCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAATCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCGCGAAAAGACCTGAACGTTCAGATGATGATGGAGATCGAGTCGGCTCTGTTCAGCGCTGAGGCTATGAGGTCGCCGTGCGTCTTCATCAGGCCAGAGGTGGACAAGGCGACCGCTAACAAGGTCAAGGACATCGTGGTCAACCACCAGGGAGATATTTGCGAGGAAGAGGAAGACGCCACCCACATCGTGTACCCTGCCGTCGATCCAATGGAGGAGGAGTACGCCCGGCCGGTGATGCGCCGCGGCTCGCACGTCCTCTTGCACTGGTACTACCTGCCTGACAGCCACGATACTTGGGGCACCGCCGATTTGCCGGTGGACGTCCCAGAGACAGTGAGCTGGGAGTGCACGCGCGGGGAGCCGTGGCGCATCACCGCCGCCTGGGTGCTCGACCTGCCTCAGTACAACGAGTGGATGAACGAGGAAGACTATGAGGTCGACTCGACCGGCAAAAAGAAGGTGCATAAGCTACGTCTGTGCGTGGACGACCTGATCCCGGGCGGCGAGCCGTCCAGCAAGAGCAAGAAGGGCAGCAAGAGAAAGCGCTCGCCTTCGCCACCGCCGCAGAAACACGGCAAGAGGAAAAGCCGCACCACGAAGCGCCGCGAGAACGACGTAGAGGACGAGGACGACAACGTGTCGCGCGACAACACCGACGCGGCGCCCACGCCCGACGCCGACCGGTCCGCCGACACGGGCGGCGCGGCCCCGTCGGACGCGCCGTCGTGCTCGGCGACCACGGACGCGCCCTCCACGCCCGCGCCGGTCTCGGAGCCGCACGACGACTCGCAGGGGAAGCACAGCGATTCTAATACCCAGGGGAAGCATAGTGATTCCAACACGCAGGAAATGCTGACCAAGGACGAGTTGGAGGACAACGTGACCGACCAGACGCACCACATCGTCGTGCCGTCCTACTCGGCCTGGTTCGACTACAACTCGATCCACACCATCGAGAAGCGAGCGATGCCCGAGTTCTTCAACGGGAAGAACAAGTCGAAGACACCGGAGATTTATCTCGCTTACAGGAACTTCATGATCGACACGTACCGCCTGAACCCCACCGAGTACCTGACGAGCACGGCGTGCCGCCGGAACCTCGCCGGGGACGTGTGCGCCATTATGCGGGTGCACGGCTTCCTCGAACAGTGGGGGCTGGTCAACTATCAGTTGGACGCGGACTCGCGCCCCACGGCGATGGGCCCGCCGCCCACGTCGCACTTCCACGTGCTCTCCGACACGCCGTCGGGACTGCAGCCGCTGCAGCCGAGGCCCACGCAGCCGAGGCCGGTGGAGAACGCAGCCGTCCCCAAGATCGAAGCCGGCCTGCCCAACGGCACGGACTCGCTAGTGCCGGCGGGCGCGGCCGCCGCCGCCGCCGCTGCCGTCGCTGCCGCTTCGCCGCACGTGAAGACCGAGCCGGTTATAGAGCTCGGCGGGGCGGCTGGGCTTAAGATGGATCAGTACCGCGGCGGCGTCAGAGGGCGCGAGTGGACCGAACAAGAGACATTGCTCCTCCTAGAAGCATTGGAGCTCCATCGCGACGACTGGAACCGGGTGGCGGCGCATGTCGGCTCGCGGACTCATGACGAGTGTATCCTACACTTCCTGCGGCTGCCCATTGAGGATCCCTATCTGCAGGATGCGCCCTCTGGCGGCGTGCTCGGCCCACTGGCCTACCAGCCGATCCCGTTCAGCAAGACCGGCAACCCGGTGATGAGCACGGTGGCGTTCCTCGCGTCCGTGGTGGACCCCCGGATCGCGTCCCGGGCCACCAGGGCCGCCATGGAGGAGTTTGCCGCTATCAAGGACGAGGTCCCCGCGGCGATGATGGAGGCGCACGTGAAGGCGGCCGGCGCGCACGGGCCCGCCGCCGCGCTCGCCGCCACCGGGATCGCCGGCACCGCGCCGGAGCTCTCGCCGAACCCAACCGAGAAGAAGGAGGGCACCGCCGAAGTGAAGGCCGAAGCCATGGAGACTGAGGAGACTGAGACGCCGAAGCTCAAAGAGGAGGCGAGTGAATCTCCGGCTCCCGAAGAGACTAAGGAGCCGAAGGAGGAACCTGCTGTGCAGCCTGCCCCCGCATGCCCAACGCCCCCGGAGGCGCCGACGGGTGTGGACGCGAAACTGCAGTCCGCGGCCGCAGCAGCACTGGCCGCAGCCGCTGTCAAGGCTAAACACCTAGCCGGCGTGGAAGAACGCAAGATCAAGTCCCTGGTAGCTCTGCTCGTTGAGACGCAGATGAAGAAACTAGAGATCAAGCTGAGGCACTTTGAGGAGCTGGAGGCCACTATGGAGCGCGAGAGGGAAGGTCTGGAATACCAGCGGCAACAGCTGATCCAGGAGCGTCAACAGTTTCACCTGGAACAACTGAAGGCGGCAGAGTTCCGCGCACGGCACCAGGCGCATCAGAGGCTGCAAGCGGAGAGCGGCGCGGCGGCGGCGGCCGAGCAGGCCGCGGGCGAGGCGCCTGCCGTGACGCAGCATGCCTAA
- Protein Sequence
- MKVFMDTKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALFSAEAMRSPCVFIRPEVDKATANKVKDIVVNHQGDICEEEEDATHIVYPAVDPMEEEYARPVMRRGSHVLLHWYYLPDSHDTWGTADLPVDVPETVSWECTRGEPWRITAAWVLDLPQYNEWMNEEDYEVDSTGKKKVHKLRLCVDDLIPGGEPSSKSKKGSKRKRSPSPPPQKHGKRKSRTTKRRENDVEDEDDNVSRDNTDAAPTPDADRSADTGGAAPSDAPSCSATTDAPSTPAPVSEPHDDSQGKHSDSNTQGKHSDSNTQEMLTKDELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRAMPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQLDADSRPTAMGPPPTSHFHVLSDTPSGLQPLQPRPTQPRPVENAAVPKIEAGLPNGTDSLVPAGAAAAAAAAVAAASPHVKTEPVIELGGAAGLKMDQYRGGVRGREWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLQDAPSGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASRATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPELSPNPTEKKEGTAEVKAEAMETEETETPKLKEEASESPAPEETKEPKEEPAVQPAPACPTPPEAPTGVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAAAAAEQAAGEAPAVTQHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01508014;
- 90% Identity
- iTF_00208834;
- 80% Identity
- -