Badu016989.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026121.1:20865717-20868025[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-08 2.4e-05 24.8 0.2 4 39 49 84 46 89 0.91
Sequence Information
- Coding Sequence
- ATGTTGGAACCTGCAGTCGAAAACAATCGCGACGCGGAGCGCACGCTTGTTTTTATAAAATTTCTGCTGAGAAAACATAACTTAATGGAGAAAGGATCACCAGCTTCTACCACAAAGAAAAAAAGGGCTCAATGGACATCGCAGCAGATGGAAAACGCTGTAAAAATGGTAGAAAGGGGTATTTTATCTACATATGCTGCTGCAGCCAGGTACAGCATTCCAAGAAGAACCCTACGCAACCATCTAGAGAGTGGTTCAACTATGCGAAAGCTAGGTCGGTCGGCTATATTAACAATAGAACAAGAAGCTGGACTTGTCAGAAGAATTGTACGTTTGGCTGATGTTGGGGTGCCGTTGACTTCAAAGATGTTGCGTGTACAGGCTTTTTCATTCTGTAAAATTAAGAAAATTCCAAACACTTTCAACGATGCCAAAAATACTGCGGGGAAAAAATGGTTGAGATTATTTCTCAAACGACACCCTGAACTTGCACGTCGTAAAGCACAGATAATGAATCCAGCCCGTGCTCAAAAATTAAATAAAGATATTGTTAGCGATCACTTTTCTAAATACAAAAGCGTGCTGGATAGACTTGGGATTGAACATAGGCCAGAAAACATTTACAACATCGATGAAAAAAATTGCCGCATATCTTTGCATCATCAGCAGGAAGTTCTGACAGCTAAAGGGAAAAAGAGAGTTCATCAAATAGCAAATGAGCATGCTGAAAGTGTGACTGTGGTAGGCTGCGGAAATGCTATAGGATCAGCTATTCCTCCAGTTATATTATTTAAAGGTAAAAGACTAAAGTCAGAATTTAAAGATAATTTACCACCAGGCTCTCTGGTGAAGATGACGCCAAAAGGAAGCATGACGACAGAAACTTTCATAGAGTTTATTAACCATTTGCATAAATACAGAACATCAGGGCCATGTCTCCTCATATTTGACGGTGCAAAATGCCACTTGGACTTTACTATTGTCGAGGAAGCTGATAAATGTGGTATTACTTTATATTGTCTTCCGTCAAATACCACGCATGAATTACAGCCCATGGATAAGTCTGTTTATCGTTCTTTTGAGCACCATTGGGACCAAGAATTAATTAAATACGTCAGTCAGCACCCTGAAAGAACAATAAACAAGACAAGCTTCAACGTTATTCTCTCACAAGTGTGGCCGAAATGCATGACTATTAGCAACATCTCGAATGGGTTTCGCGCTACAGGGTTATATCCATATAACCCAGATGCTATTCCTGAAGAGGCGTTTGCGCCTTCTGCGTTGTCAGAACTACCAAATCCTACAAGCAGTGAGAATATTGCTGTCTTATCTGCTGAATTCAGAGAACAAGATATTTCAACTGCGACTGTTGAAGATTCGGATGGCTCAGGCACAGATACTGAGAATTTGCCACTGAGATTGTATGAAAAAAATATGAAAAAGGCTGATTAA
- Protein Sequence
- MLEPAVENNRDAERTLVFIKFLLRKHNLMEKGSPASTTKKKRAQWTSQQMENAVKMVERGILSTYAAAARYSIPRRTLRNHLESGSTMRKLGRSAILTIEQEAGLVRRIVRLADVGVPLTSKMLRVQAFSFCKIKKIPNTFNDAKNTAGKKWLRLFLKRHPELARRKAQIMNPARAQKLNKDIVSDHFSKYKSVLDRLGIEHRPENIYNIDEKNCRISLHHQQEVLTAKGKKRVHQIANEHAESVTVVGCGNAIGSAIPPVILFKGKRLKSEFKDNLPPGSLVKMTPKGSMTTETFIEFINHLHKYRTSGPCLLIFDGAKCHLDFTIVEEADKCGITLYCLPSNTTHELQPMDKSVYRSFEHHWDQELIKYVSQHPERTINKTSFNVILSQVWPKCMTISNISNGFRATGLYPYNPDAIPEEAFAPSALSELPNPTSSENIAVLSAEFREQDISTATVEDSDGSGTDTENLPLRLYEKNMKKAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00207853; iTF_01336772; iTF_01082373; iTF_00187098;
- 90% Identity
- iTF_01082373; iTF_00207853;
- 80% Identity
- -