Badu024177.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026126.1:15868093-15869739[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-10 2e-07 31.5 0.0 1 43 16 58 16 59 0.95
Sequence Information
- Coding Sequence
- ATGCCTCGTCAATACCAACGAAAATCATTGCGAGCGTCTTCGTATACCCAGGAAGAATTACAGTCAGCCATAGAACGAGTCAAAAGTGGAGAGCTTTCTAATTATGCAGCCTCGAAAATGTACGATATCCCTACATCTACTCTTAACGACCACGTGAAAGGTAAAACAGGCTTATTAAGTCAAACACTTGGCCGAGCCCCTGCAATTCCCATAGAGATGGAAAATAGGCTGGCATCTTGTCTACGAGTATTGGAAAAATGGGGATGGGGCTTATTTAGGACCGAAGTTTTAGATATTGCCGAGAAGTTTATAAAGGCCAACAATATCAAAACACCATTTAAAAATGATAGACCCGGGCCCGATTGGTTCATATCATTTCGCAAGCGACACCAACTTTCGATTAAAAAACCGCAATCCGTCGAGTATATCAGGAAACGAATGACAGATCCCTTTGTCATATACGAATACTTCACCATGCTGGAAGAAACCCTTTTGGAGTTGGGCATAACAGATCCTCAAAGAATTTGGAATCTAGATGAGACGTCGGTATGTCTAGACCCCACAAAAACTAAGGTAGTGGGTGGTATTGGTGCCCCATGCACAAGAACGACAAAAGGAACAGGCAAAGAGAACATTACAGTATTGACAACCGTTAGTGCCGCTGGTAAAAAATTATCGCCTTTGATTGTCTTTAAAGGCAAATATATGTATGAAGAGTGGATGAGCATGAATGAAAAAGAAAAATATGATTTTGAAATTTCTTATGCCGTCAGCAAACGCGGTTGGATGGAGACAGCGTTATTTTTTGATTACATGGATAAAATTATCATTCCAAGTTTGGGTGACGAACGGCCAGTTTTAATTATTTACGATGGTCATAACACCCACGTTGACCCGAAAGTTGTGGAATTAGCTGTAAAAAACCATATAACGATTCTAAAACTGCCCGCGCACACCTCCCATCTCCTTCAACCACTGGATTTAGCGGTGTTTAAGTCCTTTAAGACAAGTTGGGACAAAAAGCTTGTCCAGTGGCAACGGCAGAACGTCGGCGTTAAAATACGCAAACAAGTATTTGCGGAAATGTTTGCTGAAACGTGGCATCATGTAAATCCAAATGTGATTCAAAGTGGTTTTAGAAAAGGAGGTATTCTTCCGTTTAATGCGAATGTTATACCGGAAGAAAAATATGATCCAGCGGCACTGAGGAGATGGAAAATAAAGATGTCTGAAAAGAAATTGACAGAGTTGAAAACGCTCAAACACATTTGTGTAGAAATCATCAATAAAAACATGTTTTCCAATACATCTGCTTCCACAAATCAAAACGGTGTCGACAGTTTCACAGACAATCTCGGACAGACTCAGCCAGGGTACAACACTTCATTTGAGGAGCTGCTTCTTAAAAAGGTTGCCCAACATTCTCAAAATACAGGTAATAAAAACTCGACCAAACTAACACGTGTTGCAAAGGGAAGCGAAGTCATAACACGCAGCTATTTAGTGAAACAGAAAGAAAGAGAAGTAGAAGATATGCAAAAGCTTAATTCGAATTCATCAAATGAAACGTCGGCATCTCAACCTAATGATAACGAGAAACCTGGTCCATCTAATATATCAAAGAAAAAACCAAAGAATAAGAAATAG
- Protein Sequence
- MPRQYQRKSLRASSYTQEELQSAIERVKSGELSNYAASKMYDIPTSTLNDHVKGKTGLLSQTLGRAPAIPIEMENRLASCLRVLEKWGWGLFRTEVLDIAEKFIKANNIKTPFKNDRPGPDWFISFRKRHQLSIKKPQSVEYIRKRMTDPFVIYEYFTMLEETLLELGITDPQRIWNLDETSVCLDPTKTKVVGGIGAPCTRTTKGTGKENITVLTTVSAAGKKLSPLIVFKGKYMYEEWMSMNEKEKYDFEISYAVSKRGWMETALFFDYMDKIIIPSLGDERPVLIIYDGHNTHVDPKVVELAVKNHITILKLPAHTSHLLQPLDLAVFKSFKTSWDKKLVQWQRQNVGVKIRKQVFAEMFAETWHHVNPNVIQSGFRKGGILPFNANVIPEEKYDPAALRRWKIKMSEKKLTELKTLKHICVEIINKNMFSNTSASTNQNGVDSFTDNLGQTQPGYNTSFEELLLKKVAQHSQNTGNKNSTKLTRVAKGSEVITRSYLVKQKEREVEDMQKLNSNSSNETSASQPNDNEKPGPSNISKKKPKNKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00208792;
- 90% Identity
- iTF_00208792; iTF_00207837;
- 80% Identity
- -