Badu005844.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026115.1:14940108-14942068[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-09 1e-06 29.2 0.0 2 43 30 71 29 73 0.92 2 2 0.64 4.3e+02 1.6 0.0 25 42 128 146 128 149 0.82
Sequence Information
- Coding Sequence
- ATGGCTCCTCCGCGTCAAAGGATAAAAAAGGACAAGTCTAAATTGGTGGGGGTAAAGAAAACACACAGACGTCTATTTACTTATAAGCAAGAGGATCTCGATAAAGCAATAGACGAATATAAAAACAAAGGGATGGACATAAGGGAAGCCTGCCGGGTATTCGGCGTTCCAAAAACGACAGTAATTGATAGAGTCTCAGGAAAAATTTCGGCCAACAAAAGACCCAAAGTAGGCCCAGACCCAGTTTTAGGTCTTGAATATGAAGAAAGAGTTAAAAACTGGGTATTAGATATGGCTAGATGTGGGTTCCCTATACAAAAGAAAGATCTGCTTGAAAGCGTATCTAAAGTCATTAAAGATACTGGACTCAAAAATCCATTTAAATATGGTATTCCGGGAGACACGTGGTATCATGCTTTTTTAAGACGCTACCCTGATAATAAAAATACTCCTTCTGCTAAAGATTATGATACAGCTATGAAAGTTGTTTCATTTATTAGAGACAATTTGTGCAAATGTAATATTGATACGGACGTAGTTTTGGCTGAAATAGAAAAGGCTAAAAGTAATCGGCCCAAAAGTAACCGAAATTCTGCCTCATCTAATACGAGCATCAGCATACTCGCTGCCTATACCGATACCGAAAAGAGTGTTGAGGAGATTGTCACCTTACCGCCAGCTACATGTCAAAATTTAGACATTAGGACTGCTGAGCTGCAGACTGATGCAACATTGCAGCAATTTATAGCTGACGAGAGTATCGAAAATGTAAGTAATCTTGAGGCTGGAACATTTATCTCGCTCGACAATATCTCGGTCATGCCGTTAGAAGAAATCGAAATCTGTCAGGAGACATCTCAGATTACGGCGTTGGCCGAGATACCTGAACAACGAGACTCTCAGGCATCAAACCAACACAATAGATTGCAAATCAACACAATCAACGATGTTTTTGCCAGGCATTTAACATTTCCCGAGCTCCCCTCACCAAAAACCAAAAATAAGGCTCCTAAATTGCCGAGCGCAATTTCATCTACGGAATGGAGAAAATATTTTGAAAAAAAAGATGAAGAAAAAGAAAATCTACTCAAGGAAAAAATACGGAAACAACAATTAAGGGCTGAAGTTAAAGAAAGAAAAGCCAAGGAGAAGACCAGCAAAATGACTAGAAAAAAGAAAGCAGTAAAGAAGGACTAG
- Protein Sequence
- MAPPRQRIKKDKSKLVGVKKTHRRLFTYKQEDLDKAIDEYKNKGMDIREACRVFGVPKTTVIDRVSGKISANKRPKVGPDPVLGLEYEERVKNWVLDMARCGFPIQKKDLLESVSKVIKDTGLKNPFKYGIPGDTWYHAFLRRYPDNKNTPSAKDYDTAMKVVSFIRDNLCKCNIDTDVVLAEIEKAKSNRPKSNRNSASSNTSISILAAYTDTEKSVEEIVTLPPATCQNLDIRTAELQTDATLQQFIADESIENVSNLEAGTFISLDNISVMPLEEIEICQETSQITALAEIPEQRDSQASNQHNRLQINTINDVFARHLTFPELPSPKTKNKAPKLPSAISSTEWRKYFEKKDEEKENLLKEKIRKQQLRAEVKERKAKEKTSKMTRKKKAVKKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00207841;
- 90% Identity
- iTF_00207841;
- 80% Identity
- -