Badu007944.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026139.1:11460372-11462423[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-11 2.6e-08 34.3 0.0 2 43 30 71 29 73 0.92 2 2 5.7 3.8e+03 -1.4 0.0 27 44 130 148 130 148 0.90
Sequence Information
- Coding Sequence
- ATGGCTCCTCCGCGTCAAAGGATAAAAAAGGACAAGTCTAAATTGGTGGGGGTAAAGAAAACACACAGACGTCTATTTACTTATAAGCAAGAGGATCTCGATAAAGCAATAGACGAAATTAAAAACAAAGGGATGGGCATAAGGGAAGCCTGCCGGGTATTCGGCGTTCCAAAAACGACAGTAATCGATAGAGTCTCAGGAAAAATTTCGGCCAACAAAAGACCCAAAGTAGGCCCAGACCCAGTTTTAGGTCTTGAATATGAAGAAAGAGTTAAAAACTGGGTATTAGATATGGCTAGATGTGGGTTCCCTATACAAAAGAAAGATCTGCTTGAAAGCGTATCTAAAGTCATTAAAGATACTGGACTAAAAAATCAATTTAAAGATGGTATTCCGGGAGACACGTGGTATCATGCTTTTTTAAGACGCCACCCTGATGTGAGTGTACGTGAACCCGAGGGTATTAATAACGCAAGAGCGGCAGTAACTGAAACACGTATACGATGCTGGTTTAATGATTTGAGAGAATACATCAAGTCCATGGATTGTTTAGACATTTTTGACGACCCTGATAGGATATTTAACGGAGACGAAACAGGATTTTCTCTTTGCCCAAAAAGTGGAAAAGTTTTGGGGCCTAAAGGCTACAAAAATTTATATATATTAAAAAAAAATAACGAAAAAGAAAATCTAACTGTGTTAGCGGTATTTTCCGCTAATGGCACATTGTGTCCCCCACTGGTAGTGTTTCCATACATAAGACCGCCGAAGGCTCTGGTAGACAGTATGCCTGAGTCGTGGGTACTAGGCAGGTCTGAAAGCGGTTGGATGCGGAGCGACGTGTTCTATGAATACGTCTGCAATACCTTCAATTCATGGCTCATAGAACACGGCATTAAGAAACCCGTTATATTGTTTATAGACGGCCATAAATCCCATATGACGCTTTCATTAAGCGAATTTTGTGAAAAAAACGGGATAATACTGTACGCCCTTCCGGCAAATACAACCCATATTTTACAGCCAGCCGACGTAAGCGTCTTTAAACCATTAAAGCAGGAGTGGAAAAAGACAGTAAAAACCTGGCAAGGTCGGGAGGAAAATATTAATAAAACAATAAACAAATTAAATTTTTGTAAAGTATTATATGAAACCTTCAGCACTATAAACCTTGACACTGCAATAATCAATGGATTCCGCAAATGCGGGTTATACCCACTAGACGAAGACGCCGTTGATTACACGAAATGTGTAAAAGACACAATTAAGAAAAGGACCCGCATTTCTAATCAGAATAAAAATACTCCTTCTGCTAGAGATTATGATACAGCTATGAAAGTTGTTTCATTTATTAGAGACAATTTGTGCAAATGTAATATTGATACGGACGTAGTTTTGGCTGAAATAGAAAAGGCTAAAAGTAATCGGCCCAAAAGTAACCGAAATTCTGCCTCATCTAATACGAGCATCAGCATACTCGCTGCCTATACCGATACCGAAAAGAGTGTTGAGGAGATTGTCACCTTACCGCCAGCTACATGTCCAAATTTAGACATTAGGACTGCTGAGCTGCAGACTGATGCAACATTGCAGCAATTTATAGCTGACGAGAGTATCGAAAATGTAAGTAATCTTGAGGCTGGAACATTTATCTCGCTCGACAATATCTCGGTCATGCCGTTAGAAGAAATCGAAATCTGTCAGGAGACATCTCAGATTACGGCGTTGGCCGAGATACCTGAACAACGAGACTCTCAGGCATCAAACCAACACAATAGATTGCAAATCAACACAATCAACGATGTTTTTGCCAGGCATTTAACATTTCCCGAGCTCCCCTCACCAAAAACCAAAAATAAGGCTCCTAAATTGCCGAGCGCAATTTCATCTACGGAATGGAGAAAATATTTTGAAAAAAAAGATGAAGAAAAAGAAAATCTACTCAAGGAAAAATTACGGAAACAACAATTAAGGGCTGAAGTTAAAGAAAGAAAAGCCAAGGAGAAGACCAGCAAAATGACTAGAAAAAAGAAAGCAGTAAAGAAGGACTAG
- Protein Sequence
- MAPPRQRIKKDKSKLVGVKKTHRRLFTYKQEDLDKAIDEIKNKGMGIREACRVFGVPKTTVIDRVSGKISANKRPKVGPDPVLGLEYEERVKNWVLDMARCGFPIQKKDLLESVSKVIKDTGLKNQFKDGIPGDTWYHAFLRRHPDVSVREPEGINNARAAVTETRIRCWFNDLREYIKSMDCLDIFDDPDRIFNGDETGFSLCPKSGKVLGPKGYKNLYILKKNNEKENLTVLAVFSANGTLCPPLVVFPYIRPPKALVDSMPESWVLGRSESGWMRSDVFYEYVCNTFNSWLIEHGIKKPVILFIDGHKSHMTLSLSEFCEKNGIILYALPANTTHILQPADVSVFKPLKQEWKKTVKTWQGREENINKTINKLNFCKVLYETFSTINLDTAIINGFRKCGLYPLDEDAVDYTKCVKDTIKKRTRISNQNKNTPSARDYDTAMKVVSFIRDNLCKCNIDTDVVLAEIEKAKSNRPKSNRNSASSNTSISILAAYTDTEKSVEEIVTLPPATCPNLDIRTAELQTDATLQQFIADESIENVSNLEAGTFISLDNISVMPLEEIEICQETSQITALAEIPEQRDSQASNQHNRLQINTINDVFARHLTFPELPSPKTKNKAPKLPSAISSTEWRKYFEKKDEEKENLLKEKLRKQQLRAEVKERKAKEKTSKMTRKKKAVKKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -