Badu030018.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026131.1:16490013-16498916[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-10 2.7e-07 31.1 0.0 4 39 168 204 165 208 0.89 2 2 0.00012 0.08 13.5 0.1 3 27 221 245 219 246 0.94
Sequence Information
- Coding Sequence
- ATGCCAGGCTACGGTCTGTGTCAAGTAAAATGCGAGCCTCTATCAGAAGAAGAAGATAGCAATTCTCAATGTTTTTCTAGTTATACCGATAACCAGAATGAAGTATCCGAGCTTGTCCCCGTAAAATTGGAGCCAGAAACACACAATGATGATCATGAGCCTTCACATCTCCTGCAACACTTACAGGGCTCCGGTGGCCTCCTGGAGCTGGAGGCCGGGGCGCCGGCGGGCCCGGCCGCCACGCCGGTCCGCGGGAAGCTCGAGCCCCACGACCTGGACCGCACCACACTGGCCACGCTGCAATCCACGCCAAACGCCACGAGCTCCTCACTGCTTGAGCGTCACATGGCGCTGGGCGCCGAGGCCGATATTGCGGAGTTCATCCCGTTGCTGCCGGTCAAGGACGAGCCCCTGTCGGATGGAGAGCAAGGCTGCCTGAGCGGCGACGAGGGCCGCGGCGCGCGCGGCGGCGGCGGCAGCCCCAAGTCCTGGACGCAGAAGGACATGGACCAGGCCTTGGATGCCTTGAAGAACCACAACATGAGCCTTACTAAGGCGTCGGCCCGCTTCGGCATCCCGTCCACGACGCTGTGGCAGCGCGCGCACCGGCTGGGCATCGACACGCCGAAGAAGGACGGCGGCGCCAAGTCGTGGGGCGACGGCGACCTGCGGCGCGCGCTCGCCGCGCTGAGGGCGGGGCTGCTGTCCGCTAATAAGGCCAGCAAGGCTTACGGTACCGTATACATACTTACATACATAAAGCTCACGCCTGTGTCCCACAGTTACGGCATCAACACGCCGAAGAACGGGTGCGCAAAGTCTTGGGTTGAAGGGGATCTTAGGCGCCCGTTCGCGCTGTGA
- Protein Sequence
- MPGYGLCQVKCEPLSEEEDSNSQCFSSYTDNQNEVSELVPVKLEPETHNDDHEPSHLLQHLQGSGGLLELEAGAPAGPAATPVRGKLEPHDLDRTTLATLQSTPNATSSSLLERHMALGAEADIAEFIPLLPVKDEPLSDGEQGCLSGDEGRGARGGGGSPKSWTQKDMDQALDALKNHNMSLTKASARFGIPSTTLWQRAHRLGIDTPKKDGGAKSWGDGDLRRALAALRAGLLSANKASKAYGTVYILTYIKLTPVSHSYGINTPKNGCAKSWVEGDLRRPFAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00208776;
- 90% Identity
- iTF_00208776;
- 80% Identity
- -