Basic Information

Gene Symbol
XBP1
Assembly
GCA_907269095.1
Location
OU026127.1:3317506-3319348[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.46 5.9e+02 1.4 0.0 14 25 27 38 26 40 0.89
2 3 1e-18 1.3e-15 58.0 8.9 2 59 43 100 43 106 0.93
3 3 0.0051 6.6 7.7 0.2 34 54 89 109 89 114 0.91

Sequence Information

Coding Sequence
ATGAGCGCTCCTATTATCATCACCGTTCCCAACAACTATTTGGCTGTGGAAGATGTGGAGCCGAAGGTGGAGGCCGACGTCGCCGCCTCGCCCTCCAGGAAGCGGCGGCTGGACCATCTCACTTGGGAGGAAAAGATGCAAAGGAAGAAATTGAAGAACCGCGTCGCGGCGCAAACCTCGCGCGACCGGAAGAAGGCTCGCATGGACGAGATGGAGTCCCAGATCAAGTACTTGATGGACTCGAACGATCGTCTCACGAGCGAGGTGGAGAGCCTGAAGGCTCTGAATGAGAGGTTATTAGGCGAGAACGTGTCGTTGCGTGAAGCTGCGGCGCGGCCCGTCTCGGGGGTCCGGTCACCGGCAGTGTCTCCTCAGCAGAAGGAGGGACCCCCGACGGCGAGCCGCGCGGCGCTGCTGCTGATGCTGCTCCTCTCGCAGAACTCCTCGCACACCTCGACTCCGCGGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCCAAGAAATTGGTGCAGATACTGCAGGAGAGGCTGAAGATATCTCAGTCAGGGAAAATAGAGAATGCCCTAAAGGAATTGAAGTGGTGGGGACCTCAGCAAAGCACCTGGAATCCGATGAAGGTGTCGTCGTAG
Protein Sequence
MSAPIIITVPNNYLAVEDVEPKVEADVAASPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKARMDEMESQIKYLMDSNDRLTSEVESLKALNERLLGENVSLREAAARPVSGVRSPAVSPQQKEGPPTASRAALLLMLLLSQNSSHTSTPRSTSIPSINLQTPSSKKLVQILQERLKISQSGKIENALKELKWWGPQQSTWNPMKVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00208546;
90% Identity
iTF_00208546;
80% Identity
-