Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467121.1:5171189-5186610[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00016 0.011 16.6 2.6 1 23 357 379 357 379 0.99

2 10 0.05 3.6 8.7 0.2 2 23 387 408 386 408 0.94

3 10 0.026 1.9 9.6 1.0 1 23 412 434 412 434 0.98

4 10 0.007 0.51 11.4 0.4 1 23 439 462 439 462 0.94

5 10 0.062 4.5 8.4 0.4 1 23 467 490 467 490 0.95

6 10 0.00046 0.034 15.1 0.2 2 23 504 526 503 526 0.97

7 10 0.051 3.7 8.7 2.5 3 23 592 612 590 612 0.96

8 10 0.011 0.79 10.8 2.2 1 23 618 640 618 640 0.97

9 10 2.6e-06 0.00019 22.2 4.7 2 23 646 667 645 667 0.96

10 10 5.7e-05 0.0042 17.9 1.7 1 23 673 696 673 696 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00016	0.011	16.6	2.6	1	23	357	379	357	379	0.99
2	10	0.05	3.6	8.7	0.2	2	23	387	408	386	408	0.94
3	10	0.026	1.9	9.6	1.0	1	23	412	434	412	434	0.98
4	10	0.007	0.51	11.4	0.4	1	23	439	462	439	462	0.94
5	10	0.062	4.5	8.4	0.4	1	23	467	490	467	490	0.95
6	10	0.00046	0.034	15.1	0.2	2	23	504	526	503	526	0.97
7	10	0.051	3.7	8.7	2.5	3	23	592	612	590	612	0.96
8	10	0.011	0.79	10.8	2.2	1	23	618	640	618	640	0.97
9	10	2.6e-06	0.00019	22.2	4.7	2	23	646	667	645	667	0.96
10	10	5.7e-05	0.0042	17.9	1.7	1	23	673	696	673	696	0.96

Sequence Information

Coding Sequence: ATGGAATGTGAACATCTATTAAGAAAGACGtacagatttaaaaacaaatgtatgaaagCCATCCAAGTATTTGATAACTGGAAGAAATCTCAAGAAAATgAAAAGAAACCAGTTGAACATCTATGCACACTACTGCCAGTGTCACTTGGGCTCTGGATACAAAGTAACAATACGAGTTGCTTGTGCTACGAATTCGATGAGGAGCAGAATTCAACTACTAGATCTGACTCCAATATAAAAGAGataatcTATACCAACATATATGCGAACGACATAATCAAATTAGAAACGGAATGCGAATCGGAACTAAAACATCTTATCAAAACTGAAGAAGCcacaaacataagaaaaaacaaaaatattctacaaGATAATTTTATAGAAGTTATAGAAATTAGCAACAACGATGGAATCAAACAAGAAAACGAGTCATGCAATGATAGTTCTACCAAAGAAATTATAAATGAGGGTAGATCGAAAACAAAATGTAACGAACTCGGGGATGACATAGATGATATGACTTTATGTGACGATGAAATGGATAGTGATGAAGATGATAGTTTGACTCTTATAGCGTTAAGtatgaagaaaaaattaaatgatgcaTCAAAGAAGAGTCCAAAGAAAACCAAAGATAGAAAAAGAAGTATTAAAACTGATAAAAGtgcaaagaagaagaaagataaaGACAAGCCTAGCAGTAAACGTAAGAAGATAAAATTAGAACCGATCCAGTTTAGTAAagaaagGTTAAAGTCGGTGTTGGAAGCTAAATTTGAAGCTTGGGGTGAGCTGAAGACGGATGACGGCACCGTCATAGACAAGGATGTCATACTAAATTGTCTCAATGATAAAATAACAGATGATAAGATGAAGCAGCTGTGGGATTCTATacaatGTGACAAACCAGAACCAATAACGTTGCGTACATTCAAACACTTAATTCGTAACTACACTAACGAAGATCAATACACGTCGGTGTTCGATATAGAATATCTGAACACAGAAGCGAAGATGCTGGAAGAGTTGGAGAGGAGAAAGACTTACGAGTGCTACATAAAGGCGAAATATAAATGCGAAATGTGCTTTCTGGTGTTCTACAAGCCGAAACATTTGGAAAACCACGTTAAAATGCACGAGGAAACCGCTGGTGATTTGGTCTGTACTATTTGCAATCTGCGTTACTCTAGTGGGAAGAACTACCGGGGGCATGTGCTAGCTCACAGCGCTGTCTACAGATGCAAACTATGTCCACTTGTCACATATTACAGGGACTCTATGGTGAATCATTACAACCAGCATCAAGGGAAAGCGTACACTTGTGAGATATGTGGAAACGTAGCAAAGAGTATGTCCGGGTACAAGCGGCATCAGTATCTGTCGCACCGGCGCGGGCGGCACGTGTGCACCGCGTGCGGCCGCGCCTTCGTCTCCTCGCTCGGCGTCTCGCTGCACAGGAAAAGGATGCATCCGAACGAGCCTCCGCCGACAGAGGCTGCTAACACGGTTCGATGCTCGGAATGCGACCTATCGTTTCCCTCCGAGCAGGTGCTGCTGAAGCACACGCGTACCTGGCACCAGGCACACAAGGGTACCAGGTCTCCCGCCGGCTATAACCTcaAGCGACCTCGGACTAAGAAACCAAAGCCACCCTCCATCACTTGCCGCGCGTGTGGCGCAAGTGGCAGTATTGGGTGGTTGTCCCTCCATTTCCGCACGGAACATTCTACGTTGGACATGGACGTCGTCTATGCGGATAAGAGAAAACATTTATGCCATGTCTGCGCCAAAGGATTCTGGAATGCCACGTCGTTGAGATATCACCTCAACACTCACACTGGACTACGGCCGTACGCTTGCGACCTTTGCCCCAAGCGATGCCACAGTTCCATAGCCCTCAACGAGCACCGACTCAGACACTTCCCACCGACGAAGGAATGCAAACAATGCGGGAAGAAATTCAGAACACAGTCAAACCTCCACAACCACATGCTGttccaCATCGGTACCCGTCGACACAAATGCAATATATGTGGCAAAGCTTTCTTACACAGCACTTCTCTGAATGAACACATCCGCGGGGTGCATTACAACGTGCGTCGCGTCAAAAGGGGGGGCAATGTCGCACGAGGGGGGAAGACCGGGGAAATGGCACTAAGCGGGGGCGAGAtaagtgattaa
Protein Sequence: MECEHLLRKTYRFKNKCMKAIQVFDNWKKSQENEKKPVEHLCTLLPVSLGLWIQSNNTSCLCYEFDEEQNSTTRSDSNIKEIIYTNIYANDIIKLETECESELKHLIKTEEATNIRKNKNILQDNFIEVIEISNNDGIKQENESCNDSSTKEIINEGRSKTKCNELGDDIDDMTLCDDEMDSDEDDSLTLIALSMKKKLNDASKKSPKKTKDRKRSIKTDKSAKKKKDKDKPSSKRKKIKLEPIQFSKERLKSVLEAKFEAWGELKTDDGTVIDKDVILNCLNDKITDDKMKQLWDSIQCDKPEPITLRTFKHLIRNYTNEDQYTSVFDIEYLNTEAKMLEELERRKTYECYIKAKYKCEMCFLVFYKPKHLENHVKMHEETAGDLVCTICNLRYSSGKNYRGHVLAHSAVYRCKLCPLVTYYRDSMVNHYNQHQGKAYTCEICGNVAKSMSGYKRHQYLSHRRGRHVCTACGRAFVSSLGVSLHRKRMHPNEPPPTEAANTVRCSECDLSFPSEQVLLKHTRTWHQAHKGTRSPAGYNLKRPRTKKPKPPSITCRACGASGSIGWLSLHFRTEHSTLDMDVVYADKRKHLCHVCAKGFWNATSLRYHLNTHTGLRPYACDLCPKRCHSSIALNEHRLRHFPPTKECKQCGKKFRTQSNLHNHMLFHIGTRRHKCNICGKAFLHSTSLNEHIRGVHYNVRRVKRGGNVARGGKTGEMALSGGEISD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -