Basic Information

Insect: Biston stratarius
Gene Symbol: BCL11A
Assembly: GCA_950106695.1
Location: OX467106.1:23720232-23722421[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.1 2.3e+02 3.0 1.3 1 23 44 67 44 67 0.93

2 6 3.5e-06 0.00026 21.8 3.7 1 23 332 354 332 354 0.97

3 6 4.7e-07 3.4e-05 24.5 0.8 1 23 360 382 360 382 0.99

4 6 1.4e-07 1e-05 26.2 2.9 2 23 597 618 596 618 0.97

5 6 9.8e-06 0.00071 20.4 3.3 1 23 624 646 624 646 0.99

6 6 6.3e-05 0.0046 17.8 0.4 1 22 654 675 654 675 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.1	2.3e+02	3.0	1.3	1	23	44	67	44	67	0.93
2	6	3.5e-06	0.00026	21.8	3.7	1	23	332	354	332	354	0.97
3	6	4.7e-07	3.4e-05	24.5	0.8	1	23	360	382	360	382	0.99
4	6	1.4e-07	1e-05	26.2	2.9	2	23	597	618	596	618	0.97
5	6	9.8e-06	0.00071	20.4	3.3	1	23	624	646	624	646	0.99
6	6	6.3e-05	0.0046	17.8	0.4	1	22	654	675	654	675	0.97

Sequence Information

Coding Sequence: ATGAATCACGCAGAAGCCATCACTCACCGCCGCCCCGACCCTCGGACCTTCTGCTTAGCATGCGGCCCGCGCGGCTACCCTAGGCCCAACACTACGATATTTTTTCTCTTGTCCTCAGAACCCAGCAACTACGTGTGCTCGACTTGCAAGGCGCGGGTACATTCCGCTTGGCGACTGTTGCAACACGTTCAGCATGTCCACGGAGTCAAGATCTACGTTGAAACGATGCCGCAGCAACTGTCCAACAAACAAAACCATTCTTCGTCGAGCTCTTCGTCATCTAGTTCGGGATGTTCCTCCGCCAGCGCGCCGCTTCCCCCGCCGCAGCTGCGTCATCATCCTTTATTACCACCACCGGATATGCATTCCCCTTTTGGAGTTGGTGGCTTACTCAGAATGCCGCTGCCTGGCAGTTTGCCACCACTAGCTCACCCGTCGGTGCCTCCCGCACCGCTTTTCGCGCGGCCAAACCACCACGATCATCGTTTTCGAATGGAACAGCTCGTTTCTGAGCAGTTCCGTCACCACGGACTAAACTTGGCGGCAGCTGCCGCCGCTGTAGCAGCCAACTCGCTGCCACCGCACCAAGCATTCCCTTCTCCAGCCGACCGGTCTCCGGTCGTGCCGACATCGATCTCAGGTCGAGACAGGCCTCCACCGGTCTCTCAACCTCTTTCACTTGAACCCCAGCTGGATTTTTACTCGCAGCGCTTGCGGCAACTGGCCGGTACGACCAGTCCAGGGGCGGCCACAGGCAATTCGAGCTCTCCTAGCCCCAGGAAGCATTCTCCTCCGTTCGCTTCCCCGTCGCCCTCCCGAGTCGGCCAGACTCCACCGGTGGGCGCCGGACCCGGAACGGTGGACACACCTCGTGAAGCGACGAGGCCTCACAGCTCGCCTGAGCGCCGCATTGAACCTTTGGCAGCTGATGCACCGCCGCCCGAACGGGCGACCTCCACTCCACCTATCAAGCGGAGCAGTGACGACGTGATCCACTCCTGTGAGTTTTGTGGAAAGAAATTCCGTTCTCAAAGTAGTTTGCTAATACACAGACGATCTCACACCGGCGAAAAACCTTTTAAGTGTAGCGAATGTGACGAAGCTTTTGAAAAAGCTTCTAAATTGAAGAAACACATGAAAATACATCGACCTGGTGATGCTAATAACGAAGATGGTGAGTCAGGTGGAGATACTGGTGACGATGATACGGATGATGAACTTGATGATGAAGAACTAGAAGAGGAAGAAGAAAATGAGGATGGAGAAGATGTAGAAGAGGCTGAAGATTTAACAGTATCAAACAGCAGTGCTCCTACAAGTCTACCTAGAAAACAAGCTCTAGCAATGCCCGCACACCCACCCACTGCATCTGTAGTCGGAGAGCTCATGGATAAATTTGGACTTTCAAATATTGCTCAATATAGTGAAGCTTTCAAGCAAGCCTTACAAGAATCAGGAAAGTCCCTAAACTGGCAACTAGCAAAAGATCGTGACAATAACAACGGCCCTCCTAGTGAAAAGCCAAACGGTATGCCTCCAACTGCAGCCTTACGTTTAAAAGAGGAATTTGCAAAAATGCCTCCTCAGCCACATCCTCTCTTCAATCCTTTCGAGAACCCTTTTGAAGCATCAAAGCGCATGAAATTAGATATGGAGAGAGGTGAAGGTTGGTGGTTGCCAACATTACATGCTCAAAGACCACCTGACAATATATTTGATGGCTTAAAAAATAGCACTAATGGGCTCTTACAGAATCCTTTATTGAAAAAAGAAGGTCGCAGGAACGATACTTGTGAATACTGTGGGAAAGTGTTCAAAAATTGCTCAAATTTGACTGTGCACCGTCGTTCACATACCGGCGAAAAACCATACAAGTGTGAACTATGCTCGTACGCATGTGCTCAAAGTTCGAAACTAACGAGGCATATGAAGACGCACGGACGTCTCGGCAAGGACGTGTACCGATGCAGGTTTTGCGAGATGCCCTTCTCGGTTCCCTCGACGCTCGAGAAGCATATGCGTAAATGTGTTGTGAATCAAAGTAACGGTGCTCCTCTAGCTCTTTCTGATGATTCAAACGCGTGTCGTGACGAGGCCTCGTGA
Protein Sequence: MNHAEAITHRRPDPRTFCLACGPRGYPRPNTTIFFLLSSEPSNYVCSTCKARVHSAWRLLQHVQHVHGVKIYVETMPQQLSNKQNHSSSSSSSSSSGCSSASAPLPPPQLRHHPLLPPPDMHSPFGVGGLLRMPLPGSLPPLAHPSVPPAPLFARPNHHDHRFRMEQLVSEQFRHHGLNLAAAAAAVAANSLPPHQAFPSPADRSPVVPTSISGRDRPPPVSQPLSLEPQLDFYSQRLRQLAGTTSPGAATGNSSSPSPRKHSPPFASPSPSRVGQTPPVGAGPGTVDTPREATRPHSSPERRIEPLAADAPPPERATSTPPIKRSSDDVIHSCEFCGKKFRSQSSLLIHRRSHTGEKPFKCSECDEAFEKASKLKKHMKIHRPGDANNEDGESGGDTGDDDTDDELDDEELEEEEENEDGEDVEEAEDLTVSNSSAPTSLPRKQALAMPAHPPTASVVGELMDKFGLSNIAQYSEAFKQALQESGKSLNWQLAKDRDNNNGPPSEKPNGMPPTAALRLKEEFAKMPPQPHPLFNPFENPFEASKRMKLDMERGEGWWLPTLHAQRPPDNIFDGLKNSTNGLLQNPLLKKEGRRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRLGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQSNGAPLALSDDSNACRDEAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00034113;
90% Identity: iTF_00634816;
80% Identity: -