Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467107.1:33286190-33287770[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.05 3.7 8.7 0.3 2 23 179 201 178 201 0.88

2 9 0.046 3.3 8.8 6.5 1 23 235 257 235 257 0.98

3 9 0.00015 0.011 16.6 0.1 1 21 262 282 262 283 0.95

4 9 4.6e-06 0.00033 21.4 0.3 2 23 303 324 302 324 0.96

5 9 2.4e-05 0.0017 19.1 2.6 1 23 331 353 331 353 0.98

6 9 3.2e-05 0.0023 18.7 0.5 1 23 359 381 359 381 0.96

7 9 8.7e-06 0.00063 20.5 1.8 1 23 387 409 387 409 0.96

8 9 0.00047 0.034 15.1 4.1 1 23 415 437 415 437 0.97

9 9 7.1e-06 0.00052 20.8 3.8 1 23 443 466 443 466 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.05	3.7	8.7	0.3	2	23	179	201	178	201	0.88
2	9	0.046	3.3	8.8	6.5	1	23	235	257	235	257	0.98
3	9	0.00015	0.011	16.6	0.1	1	21	262	282	262	283	0.95
4	9	4.6e-06	0.00033	21.4	0.3	2	23	303	324	302	324	0.96
5	9	2.4e-05	0.0017	19.1	2.6	1	23	331	353	331	353	0.98
6	9	3.2e-05	0.0023	18.7	0.5	1	23	359	381	359	381	0.96
7	9	8.7e-06	0.00063	20.5	1.8	1	23	387	409	387	409	0.96
8	9	0.00047	0.034	15.1	4.1	1	23	415	437	415	437	0.97
9	9	7.1e-06	0.00052	20.8	3.8	1	23	443	466	443	466	0.98

Sequence Information

Coding Sequence: ATGAACTTAGAGGATTCTTATTGCCGACTATGTGCCGAATCTAAACCAAAAAACAAGCATGTAAACATACATTTGGATAACGTGAAAAAATATGAGATAATCGAGAAGTTGGCACGTATTAATGCCGCCACGGATTTCGACGACGAGAACCTGCccaaatatgtatgttttgattGTATTCACACATTAAACAAAGCTTTTGAATTCGTCGTGGCTATAGAATACGCTCAATATACTCTTACTCAAATATATGAGGTTTCAATTGTGAAGGAAGAGAAGGTAGATTCAGGGGGCTTTTTCGATCGCGATGCAATAGCTGCGACCACAGAAAGCGATAAAATAAAGACTGACTTAAAAAGAGAATCGAGCATCGAAGATAATAACGAAGAATGTGATGGCAATTACCAGGAAAATGATAGTGACCGGGAAATTAGCCCGCGCAAAATACCAAGAGCTAAGAAAAGTCTGGATGTTGATTCTATTCCTTTAGCACAACTTTCACAACTAAAACTATCATGGAAACACTATAACTGGTATTGCACCTTTTGTGAGACACTATTTTCATCAATAGAAGAGTTGAAAAAGCATTCTATTGAGTTGCACAAGATGTGTAACCCATACCGTTGCACTGACTGCAAAATCAGAAAATATAAActgaacaaatttttaattCACGTCCAAAGACATCACAAACAACTTAAATTTTCATGTCACATATGCTTTAAAGAGTTTAAGACTTTACTGGCAGcatgtaaacataaaaaaactcatgTCACTTCAAAATTTACATGTCCAGGCTGTATTACTTCCTTTTCAAATAATGATGAGTTAAATCAGCATATGGAGCAGTTTTGCCAGTTAAAAAGAGTCAGAAGGCTTCCGGAATTATTCCAGACAAACGGACTGACATGTACGGTTTGTcaaaagacatttaaaaataaaggtgGCCTCAATGCTCATGTTTTAATCCATATGGACAGAAAGAAAGATCACACCTGTGAAGTGTGTGGtaaaggcttttttttaaaacacaatttatCCGCTCACATGCTGTCACATAATGATGGAAGACCATACAAATGTCAATTATGTAATGCTACTTTCAAAACTccaagattattaaaaaatcatgTTGGTATACACACGAATGACAAGCCATTCACATGTAGTGAATGTGGTCGAAGTTTCCGTTTGCAACGTCATTTGAAGGCTCACAGTATTATACACACAGATATACATCCATATGCCTGTCCTCATTGTGATAAGCGATTCCGTTTTAAACCCTTACTAAACTGTCATATACGTTTGCACACTGGAGTTAAACCTTACTCATGTGAACAGTGTCATAGAGACTTCTCAAACTGGCCCAATTATAACAAACACATGAAACGTAAGCACAACATGGATTTGTCAAAGAAGAAACATACCCCAGAGGGGGTGTTTCCAAGGGATCCGAATACAGGAGAAGTTATAAAGCAacctgaaacaaataaaatgattgAATGGAAAAAAATGATGTTGCTAAAACGTATGGGGAGACCAAAAAATGTAGATCTAGATGTAGCTCTGTTACAGCTTTAG
Protein Sequence: MNLEDSYCRLCAESKPKNKHVNIHLDNVKKYEIIEKLARINAATDFDDENLPKYVCFDCIHTLNKAFEFVVAIEYAQYTLTQIYEVSIVKEEKVDSGGFFDRDAIAATTESDKIKTDLKRESSIEDNNEECDGNYQENDSDREISPRKIPRAKKSLDVDSIPLAQLSQLKLSWKHYNWYCTFCETLFSSIEELKKHSIELHKMCNPYRCTDCKIRKYKLNKFLIHVQRHHKQLKFSCHICFKEFKTLLAACKHKKTHVTSKFTCPGCITSFSNNDELNQHMEQFCQLKRVRRLPELFQTNGLTCTVCQKTFKNKGGLNAHVLIHMDRKKDHTCEVCGKGFFLKHNLSAHMLSHNDGRPYKCQLCNATFKTPRLLKNHVGIHTNDKPFTCSECGRSFRLQRHLKAHSIIHTDIHPYACPHCDKRFRFKPLLNCHIRLHTGVKPYSCEQCHRDFSNWPNYNKHMKRKHNMDLSKKKHTPEGVFPRDPNTGEVIKQPETNKMIEWKKMMLLKRMGRPKNVDLDVALLQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143291;
90% Identity: iTF_00206400;
80% Identity: -