Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467116.1:24217526-24229818[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2 1.6e+02 3.5 0.4 2 23 6 27 5 27 0.96

2 14 0.0043 0.31 12.0 0.0 1 23 1026 1049 1026 1049 0.94

3 14 2.2 1.6e+02 3.5 0.1 1 23 1125 1147 1125 1147 0.94

4 14 6.1e-05 0.0045 17.8 5.0 2 23 1150 1171 1149 1171 0.97

5 14 0.013 0.97 10.5 3.0 1 23 1177 1199 1177 1199 0.98

6 14 0.0065 0.47 11.5 3.4 2 23 1206 1227 1205 1228 0.95

7 14 5.6 4.1e+02 2.2 0.7 5 23 1241 1259 1240 1259 0.95

8 14 0.0075 0.55 11.3 2.4 3 23 1266 1287 1265 1287 0.97

9 14 0.0046 0.33 12.0 0.1 2 23 1304 1324 1303 1324 0.97

10 14 9.9e-05 0.0072 17.2 0.8 1 20 1330 1349 1330 1352 0.92

11 14 0.0017 0.12 13.3 0.6 1 23 1360 1382 1360 1382 0.98

12 14 0.014 1 10.5 7.3 1 23 1388 1410 1388 1410 0.98

13 14 7e-06 0.00051 20.8 0.8 1 23 1416 1440 1416 1440 0.97

14 14 0.001 0.076 14.0 5.1 1 23 1446 1468 1446 1469 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2	1.6e+02	3.5	0.4	2	23	6	27	5	27	0.96
2	14	0.0043	0.31	12.0	0.0	1	23	1026	1049	1026	1049	0.94
3	14	2.2	1.6e+02	3.5	0.1	1	23	1125	1147	1125	1147	0.94
4	14	6.1e-05	0.0045	17.8	5.0	2	23	1150	1171	1149	1171	0.97
5	14	0.013	0.97	10.5	3.0	1	23	1177	1199	1177	1199	0.98
6	14	0.0065	0.47	11.5	3.4	2	23	1206	1227	1205	1228	0.95
7	14	5.6	4.1e+02	2.2	0.7	5	23	1241	1259	1240	1259	0.95
8	14	0.0075	0.55	11.3	2.4	3	23	1266	1287	1265	1287	0.97
9	14	0.0046	0.33	12.0	0.1	2	23	1304	1324	1303	1324	0.97
10	14	9.9e-05	0.0072	17.2	0.8	1	20	1330	1349	1330	1352	0.92
11	14	0.0017	0.12	13.3	0.6	1	23	1360	1382	1360	1382	0.98
12	14	0.014	1	10.5	7.3	1	23	1388	1410	1388	1410	0.98
13	14	7e-06	0.00051	20.8	0.8	1	23	1416	1440	1416	1440	0.97
14	14	0.001	0.076	14.0	5.1	1	23	1446	1468	1446	1469	0.95

Sequence Information

Coding Sequence: ATGGATCAGCTGGTGCAGTGTCCCGTTTGCACGCTGTTCCTGCACAATGGCATGACTCTGGAGTCCCATCTGGACACACATCCCAAAGACCAAGTTATAAAAGCACTATGCAATATAGCTAACAAAAACAGCAGCTGTGGCAGCAGTAGAACATCAACTCCCGCTAACTCTGAAAGGTCTTACAGGAGTAGATCTCAGACGCCTGCAGCTGAAGACAATGGTCGCTGGAATAATGGTCACAGAAACCCAGATCATGACCGCTACTGGGCTAGAACTCCAAGTGGAGCGTCAAGTAGAGCTCCTAGCATAACACCAAGTAGAACGCCGAGCAGGAATCAAAGCAGGACTCCAAGATCTACTTCATCAGCCAACATTTCCAGAAATTGCACTCCAGATATTAGGATGGTAGATAATATATCCTATGAAACTACAACAGTCAGTAGTTCATCACAGCACTCAAACCAATCTCATTCTAATCTTACCAATCCCCCAATGTCTATGAAAGCTGACAAAATGCAGCAAACATACCCACCGCCAATATCGGACTATGAacagaaatatttattctacCCAGAACAGTCAGATGAAAGGGAAATCAAATATTCTCGCAGTGCTGAGTACAATGCCATGGATGTTAATAATGTGTTTTCCTACAATGTGCCAACTATAGGAGCTGCCAGTGTTAAATTACAGCCCAATGTGATACCAAATGTGATGAGAAAAAGAACTGAACCTATTAAAGTGCAGAAACCAACAAATTTATTGAGTCTAGTGAAAAACAACATTGGGGGAATGCATTACTTAGCACAGGGAGTCAAGCCCATGCATGTAATGGTAGGCCCCTCTGCACCCACCTTCGTTCAGAAGAATGTTCAGAACAGTATGATGGTGAGTGGAGCTATACCAAGCTCTCAAGCCCACCGAGATGCCAAAGCCGCTCCTCCTTTAGTTCAAAATCACTTTAACCAGCTAAGTTCTAGCACATTTACTCCGGGAACTACAGTTGTCACTCAAAACTCCCAGTATTTTTACCAGGAAATGGTTCAAAACATTGATCCAAAGACTTTCATTCCTAGTATACCTGCTGTATTTACAGGTCAAGAGAATGTCACAAATGTAGCTCAAACTAGCTCAATATACCAAAATGTGATGCTTGTTGATCAGTTCGGTAACACTTCATGTATGTACACAACACCGCAACAAATGATTCCTAAACAAACAGTCCCTCAAATGTTCACTGATACCAGTGCACTTCTAACTAATGCACAAAAACAAGCCCCTTGTTTGGCGGATCAGAATAAAACCCTGGTTATTGAGGTCAGTCCCATCATTCCTACTACAAGAATAAGTAACTGTAACAGTATGGCCAGTAAAGTATTGTCACGACCACCTCGACAAACTTCAGCAATAGTTTCTAATTTTACACTACCAAAAGCAGAGGCTCCTAATGTAACAATTACTGAAAAGGTTGACACTCAGAGTGAAGCTCCAGGTATCGCAAGGGGTCTTAAAATACTTAGCAATATAAAGGTTGAAGTTCCAGTACAACATAACAAAAGTATGATAAATACTGTGATGGATCTCACGGCTAGTGACCGCGATTATCCGGACAGGTCTGCATCACCAGAAAAGATCTTGCCAGATATAGAAAGTCACGAACAAAAGTCTTCCCATGATTTTAGCCAGCCGTCGACAAGTCGACTCGACAGTTCTGGTGACAGTTCTCACTCTTTCGCAGAGTTGAAAAAGATCACAAGTCCTACCTCAAACAAAGACTCTAGCAAAAATAATagcatagataataaaatagatatggAATTTAGTGACAGTTGTCCCGTGCCCGATTTAATATGTAATGAGAAGCCTTCCATTTCACCGATCAGTGAGCTGTCGGAGAGTGGAGACAACTCCACCGATCGTGCCCCGATTTCTCCTAAACCTGAAAGTTGTAAAATTAGTAAGGAATTAGATAGTAAAGAAAAGAAGATTCAATTGCCAATGAAACCATTTAGAAGTACTCCATTAAGACTGAATAACATTTTCGTAAAGAAAAGTAAGAAAATTTTGCAGATAAAGAAATTGAAATCGATATCCGACAGTGGTCCAAACAGACAGGACGACGAGCCCATGCCATGCTCCTCCACGGCTCCCGTCAGCTTTACTAACCAAGTTCAGAAGGTAGAGAACAAAACGTCAATTTTGAAAACGATTTCGATAGAAGAAATCAAGGGCAAAGAGGTGGCGGGGTTTGATGCGGATCCGGCCGAAGATGCCGCTCAGTTCCCAACTCCAGAAAAGTCCAATCCTGCAACAGAAGTGGTTCACGTGAAAGAAGAGTTCTCTTCAAGTAATGAGGCGTCATTCAGTAACCAGGATCAGCCGGAAATGACGTCTTTAGACCCGTTACGGCCTTCGATCAACGTCGTCAGCTACGAGAACATGTCGCCGAGAGATTTCGACGAAGAATCGAGCAACAGAGAGCTATTAGACTTGGAAGGCGCGAGTAAGACCAAGCAGTTCGTAAATATGATGAACGAAAACTATTTCGGGGATAACATTTACGAACACTATTTCACGCCGGATAGGGTGGAAGCTTTCGACGATAAAGGACCGACGGTGTTTAAAGATAATGCGAAAGAAGCGTTCTCGTGTAACATTTGGGGGGAGCCATCCACCAAGGAAAATGAGTTCGTGTTGCCGAATTTTATACACGAGAGTTACAAGATCGCGGAGAATGGGATGGATTATGCGGAGGGGGAAAGGGAGGAAGCGCCCGGGGATGAGGAGAGGGAGCGGGACAGCAAGGCAGATTTGTTGAGCGAAAGTCGTAGTGATGGGGAACCCACGCTGAACATCTGTGCTGACGAGCGCATGCCGCCGCGAGGCGATATCAGCGGTCAAGAAAGCAACGGTGATATGGATTCCTCTTGGAATGGGGCGTATTCAGAAGCGACACCAGCAGAGCCCTACGACCTGATGGCGCGCGAGAGTTGGGTCTCCGATGGGTCTGAACTCGACGTCACCGACAAACGGGACAACCTAGAGGAGATGGCCGTATTCCCGCCGGCGCGTCAGTACGAGTGTTCGTCCTGTGGCGCTACCTACCCGTCGCTGAAGGAACTGCGCGCGCACGTGAGCCTCGTGCATGCACCGCCAGTGCCGCCCTGCTCCTCCTACGCCAGAATCTCCGCCAACATTAAGAAGGAAGAGAAGATCGATGACAACGCCTTGTCTTGCGCAACGACTCTCATGACTCTGGACTCGAAGGAAAGCATCACATCCAGTATTCTGGCGTACGATTCTCTAGAGAGCAAGCCTGGCTTGGACCTGCGTGGGCTGCTCAAACAGGAGACCAAACGGAAGCGTAAGGATTTCGTCTGCCCCACGTGTAAGGTCGACCAGGTAACGGACGCGGCGTTTAACCTCCACTTGCGCACGCATCCGCTGGAGTGCCTCAAGTGCGGCAAGTGCTTCCACCGACGCGCCAACCTCAACCTGCACCTCAAGACGCATCTCGGCATCAAGAACTACAAATGTGAGATCTGCGAGAAAAGGTTCCTGACGCGGCAGAAGTTGTCGGAACACCACAACATCCACACGGGGCGTGCGCCCGTCAAATGCACGCTCTGCGACGACACCTTCCGCCGCTACTCCAACATGGTGCAGCACAGGAATCGACATCACTATCACAAGCGCGCGGCGGTTCGCGACTACGTGTGCCAGTGCGGCCTCGTGCTCCACTCGCGCGCCAAGCTCGCGTGGCACCGCGAGACGCACGACCCGCGCCCCAAGGCGTGCATGCACTGTCCCGACAAGTTCGTGCACGCGGCCTCGCTCACGCGGCACATCCGCCGGAAACACAACAACCAGTATATGACGGCGCCATCTGTGTCGCGTTCCGAGAACGTGCCCTGTCCTATTTGTAAACAGGTGTATCTGCGCACAAATCTGCGCGCACATCTCCAAACCCACAGCGGCAAGCGCCCCTACTCGTGCGTAGTTTGCAACAAAGCGTTTACCACCAAATGGAACCTAAAGCTCCACCGCTGGACGCACGTGTCCCGTTCCGCCAAGCCTTTCAAGTGCGCCCTCTGCAAGGGAGCGTTCATACGGCGAACCGAGTTCATATCGCACATGAACTCGCACAAATCCGTCCGCCCTTACACTTGCAACTACTGCGGCTGTCAGTTTATACGAAAATACAACTGTCAACGTCACGTGAAGGAACACGAAACTGCCAAGAAGTACGTGTGCGAAGTACCGGAGTGCGGTAAGTCTTTCCATAGGAGTTACTACTTGTCGGAGCATATGAAGGTGCATAGCGGGGCGCGACCGTTCTCGTGTAATATTTGCGGTAAGACTTCCAGTAATAAGTCTAATCACAATAAACACGTGAAGATTCATCACGCGAGGGAACCGGTCGCTACTGAAGCGTAG
Protein Sequence: MDQLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCNIANKNSSCGSSRTSTPANSERSYRSRSQTPAAEDNGRWNNGHRNPDHDRYWARTPSGASSRAPSITPSRTPSRNQSRTPRSTSSANISRNCTPDIRMVDNISYETTTVSSSSQHSNQSHSNLTNPPMSMKADKMQQTYPPPISDYEQKYLFYPEQSDEREIKYSRSAEYNAMDVNNVFSYNVPTIGAASVKLQPNVIPNVMRKRTEPIKVQKPTNLLSLVKNNIGGMHYLAQGVKPMHVMVGPSAPTFVQKNVQNSMMVSGAIPSSQAHRDAKAAPPLVQNHFNQLSSSTFTPGTTVVTQNSQYFYQEMVQNIDPKTFIPSIPAVFTGQENVTNVAQTSSIYQNVMLVDQFGNTSCMYTTPQQMIPKQTVPQMFTDTSALLTNAQKQAPCLADQNKTLVIEVSPIIPTTRISNCNSMASKVLSRPPRQTSAIVSNFTLPKAEAPNVTITEKVDTQSEAPGIARGLKILSNIKVEVPVQHNKSMINTVMDLTASDRDYPDRSASPEKILPDIESHEQKSSHDFSQPSTSRLDSSGDSSHSFAELKKITSPTSNKDSSKNNSIDNKIDMEFSDSCPVPDLICNEKPSISPISELSESGDNSTDRAPISPKPESCKISKELDSKEKKIQLPMKPFRSTPLRLNNIFVKKSKKILQIKKLKSISDSGPNRQDDEPMPCSSTAPVSFTNQVQKVENKTSILKTISIEEIKGKEVAGFDADPAEDAAQFPTPEKSNPATEVVHVKEEFSSSNEASFSNQDQPEMTSLDPLRPSINVVSYENMSPRDFDEESSNRELLDLEGASKTKQFVNMMNENYFGDNIYEHYFTPDRVEAFDDKGPTVFKDNAKEAFSCNIWGEPSTKENEFVLPNFIHESYKIAENGMDYAEGEREEAPGDEERERDSKADLLSESRSDGEPTLNICADERMPPRGDISGQESNGDMDSSWNGAYSEATPAEPYDLMARESWVSDGSELDVTDKRDNLEEMAVFPPARQYECSSCGATYPSLKELRAHVSLVHAPPVPPCSSYARISANIKKEEKIDDNALSCATTLMTLDSKESITSSILAYDSLESKPGLDLRGLLKQETKRKRKDFVCPTCKVDQVTDAAFNLHLRTHPLECLKCGKCFHRRANLNLHLKTHLGIKNYKCEICEKRFLTRQKLSEHHNIHTGRAPVKCTLCDDTFRRYSNMVQHRNRHHYHKRAAVRDYVCQCGLVLHSRAKLAWHRETHDPRPKACMHCPDKFVHAASLTRHIRRKHNNQYMTAPSVSRSENVPCPICKQVYLRTNLRAHLQTHSGKRPYSCVVCNKAFTTKWNLKLHRWTHVSRSAKPFKCALCKGAFIRRTEFISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVKEHETAKKYVCEVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143318;
90% Identity: iTF_00206431;
80% Identity: -