Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467120.1:2720368-2722161[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00068 0.05 14.6 2.8 1 23 33 55 33 55 0.97

2 14 1.5 1.1e+02 4.1 0.0 2 23 80 102 79 102 0.86

3 14 0.006 0.43 11.6 2.0 1 23 122 145 122 145 0.96

4 14 1.3e-05 0.00098 19.9 0.8 1 23 150 172 150 173 0.96

5 14 0.9 65 4.7 1.4 1 23 178 200 178 200 0.93

6 14 0.0027 0.19 12.7 1.2 1 23 301 324 301 324 0.98

7 14 2.6 1.9e+02 3.3 0.3 3 23 353 374 351 374 0.90

8 14 0.0017 0.12 13.3 0.0 2 22 399 419 398 421 0.89

9 14 0.00042 0.031 15.2 0.2 2 23 427 449 427 449 0.94

10 14 0.015 1.1 10.3 4.4 2 23 454 476 453 476 0.93

11 14 0.025 1.8 9.6 0.4 1 23 481 504 481 504 0.96

12 14 0.0011 0.083 13.9 4.0 1 23 508 531 508 531 0.97

13 14 0.0052 0.38 11.8 2.8 2 23 538 559 537 559 0.96

14 14 9.3e-06 0.00068 20.4 1.0 1 23 565 587 565 587 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00068	0.05	14.6	2.8	1	23	33	55	33	55	0.97
2	14	1.5	1.1e+02	4.1	0.0	2	23	80	102	79	102	0.86
3	14	0.006	0.43	11.6	2.0	1	23	122	145	122	145	0.96
4	14	1.3e-05	0.00098	19.9	0.8	1	23	150	172	150	173	0.96
5	14	0.9	65	4.7	1.4	1	23	178	200	178	200	0.93
6	14	0.0027	0.19	12.7	1.2	1	23	301	324	301	324	0.98
7	14	2.6	1.9e+02	3.3	0.3	3	23	353	374	351	374	0.90
8	14	0.0017	0.12	13.3	0.0	2	22	399	419	398	421	0.89
9	14	0.00042	0.031	15.2	0.2	2	23	427	449	427	449	0.94
10	14	0.015	1.1	10.3	4.4	2	23	454	476	453	476	0.93
11	14	0.025	1.8	9.6	0.4	1	23	481	504	481	504	0.96
12	14	0.0011	0.083	13.9	4.0	1	23	508	531	508	531	0.97
13	14	0.0052	0.38	11.8	2.8	2	23	538	559	537	559	0.96
14	14	9.3e-06	0.00068	20.4	1.0	1	23	565	587	565	587	0.98

Sequence Information

Coding Sequence: ATGTTGGAGCAAACCGCTACCTCAGAAAAGATGCGGACCAATCTCAAAATACTATTCGATCATACAACCATAATCCCTTTCAAGTGGAAAAAAAACTACGCCTGTTTTTACTGCAAAGAAACGTATACTGAATATGCGAACTTTAGAAGGCACACGAAGTCCCACGGACCTTGCTCCAACAAAATcttaaaacgtttaaaaataaatcgagAAATTATGATAGACGTGTCTGAAATTGTTTGCGAGCTATGTCAGGTTGAATTTAAAAGCCGCGCCGTTGTTGTTGACCATTTAATCGAACGCCATCGCAAAATGTATATTAAGAATATTGGCACACAGTTGGAAGAGTATAGATTAAGGGATTTCAAGTGTCTTCTTTGTGATCAGGAGTTTAATAGTTTTCAAATGTTAGCACGTCACGTACATAGCTCTCATTCGAAAGATCGTTTCGTATGCAATGACTGTGGTAGATTGTTTACAACGGCTGAAAGTATATCTTTACATATTAGGACGCACCATGTTGCTAACGTATTTGCTTGTGTCAGGTGTAGCAAACAATTAGATGAAGAACATTTAAAGAAGCATGGTAAACGCGCTCATTTACGTcaatgtacagagtgcgatggGAAAGTTGAAAACGTGGGTAATCTGAAAAAAGACACCGCGAGAGATAGTATcgattataaaaaatgtagatatTGCTCCAAAGAGCTGGCTTCGGTTATAGAAATGGAATTCCATTCCTTAAATTGCGAATTCAAAGTCTACCAAATCGATACTAATGATGATAAACATTCAAGCAAGAGGTTAAGAAGAAACGCTCTATGTAACCAAATTAGGCGGAATATTCAATGTGTGTTGAATATGTCTACCGCAGtgccatttaaatttaaaggaaAATACAGCTGTTTCTACTGTTCCCAATGGTTTTCCAATTTCGATGAGTTGATTTCTCATACTCGAACGGAACACCCGGTATGCGAGCTAAAATCGAAGGCCATGCAGACGTGCAAGGGCGAAAAGGCCTGCATCAAGCTTGATATAAATAATCTCGCCTGTAAACTATGCCATCTATCCATGTCCGATCTGAAAAGCTTCGTGGACCACGCTATTGTTCAACACGGCGCGGAATATGACAAATCGGTACCATTCAAAGATTGTTTCGAAACTTTCCACCTTACTCAAGGCAGAATTCCCTGTCCTGAATGCCAAAAGCCTTTCGCGTATTTCGCGACTTTACTGAAGCATTTAGGTGCAGAGCATAACCACCATAAAGCTGTTTGTGCTTATTGCGGTCGTGGTTTCCGTACCACGACCAGTTTGGCTATGCATATATCAAATTCTCACACCGGAATGTGTGAATGTAGCGTTTGTAACATGAAATGCAAGAACTCTGCATCGTTAGCGCGGCACAAGGCTCGTTTTCACGACGCTAAAGATTTCAAATGTCCACAATGTCCGGAGTTATTCGAGACTATATACAAGAAGCAGAATCATTTGATTAAAGCTCATAACGTTGGACACAAGTGTGCGTATTGCGAGAAGTTGTTTACGAGGAATTCTTTTATGATGAATCATGTAAGACGGACACACCTGAAGGAGCGGACTGTGCCTTGCTCTGTGTGTCATGTGAAGTTTTTTGACAGCTATCATATGAAGCTCCatatggtcaaacacgaagGCATGAGACGATTCAGATGCGATGTTTGTGGAAAATCATTCTTGAGGGTGAGGAATTTGAAATCTCATATGGATACTCACAAGAAAGCATATTTACATGAAGGAGTTATTTAA
Protein Sequence: MLEQTATSEKMRTNLKILFDHTTIIPFKWKKNYACFYCKETYTEYANFRRHTKSHGPCSNKILKRLKINREIMIDVSEIVCELCQVEFKSRAVVVDHLIERHRKMYIKNIGTQLEEYRLRDFKCLLCDQEFNSFQMLARHVHSSHSKDRFVCNDCGRLFTTAESISLHIRTHHVANVFACVRCSKQLDEEHLKKHGKRAHLRQCTECDGKVENVGNLKKDTARDSIDYKKCRYCSKELASVIEMEFHSLNCEFKVYQIDTNDDKHSSKRLRRNALCNQIRRNIQCVLNMSTAVPFKFKGKYSCFYCSQWFSNFDELISHTRTEHPVCELKSKAMQTCKGEKACIKLDINNLACKLCHLSMSDLKSFVDHAIVQHGAEYDKSVPFKDCFETFHLTQGRIPCPECQKPFAYFATLLKHLGAEHNHHKAVCAYCGRGFRTTTSLAMHISNSHTGMCECSVCNMKCKNSASLARHKARFHDAKDFKCPQCPELFETIYKKQNHLIKAHNVGHKCAYCEKLFTRNSFMMNHVRRTHLKERTVPCSVCHVKFFDSYHMKLHMVKHEGMRRFRCDVCGKSFLRVRNLKSHMDTHKKAYLHEGVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00206390;
90% Identity: iTF_00206390;
80% Identity: -