Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467109.1:14525955-14532790[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.4e-06 0.00025 21.8 1.7 1 23 218 240 218 240 0.98

2 9 3.2e-08 2.3e-06 28.2 1.6 3 23 248 268 246 268 0.98

3 9 0.00011 0.008 17.1 0.3 1 23 274 296 274 296 0.98

4 9 2.4e-05 0.0017 19.1 1.8 1 23 302 324 302 324 0.99

5 9 2.4e-05 0.0018 19.1 1.7 2 23 500 521 499 521 0.96

6 9 3.1e-09 2.3e-07 31.4 1.6 1 23 527 549 527 549 0.98

7 9 0.0027 0.19 12.7 0.6 3 23 557 577 555 577 0.97

8 9 6.8e-05 0.005 17.7 1.5 1 23 583 605 583 605 0.99

9 9 0.021 1.5 9.9 0.8 1 23 611 635 611 635 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.4e-06	0.00025	21.8	1.7	1	23	218	240	218	240	0.98
2	9	3.2e-08	2.3e-06	28.2	1.6	3	23	248	268	246	268	0.98
3	9	0.00011	0.008	17.1	0.3	1	23	274	296	274	296	0.98
4	9	2.4e-05	0.0017	19.1	1.8	1	23	302	324	302	324	0.99
5	9	2.4e-05	0.0018	19.1	1.7	2	23	500	521	499	521	0.96
6	9	3.1e-09	2.3e-07	31.4	1.6	1	23	527	549	527	549	0.98
7	9	0.0027	0.19	12.7	0.6	3	23	557	577	555	577	0.97
8	9	6.8e-05	0.005	17.7	1.5	1	23	583	605	583	605	0.99
9	9	0.021	1.5	9.9	0.8	1	23	611	635	611	635	0.95

Sequence Information

Coding Sequence: ATGGTTGCTCTTCTTATATTCGAAGCGGACAATACGACAGCGCCGTATGTACTATACAAGGATGGTGTGGAGCGCGCGCCGCCGGGGACGCAGTGGGGAGGCGCCGTGCTTGATGGCGGCTATCAACCCATGCAGCACCAGAGCCCCTCCGGGCCCTCGCCACAGCCAGAGCCGCAACTCGTGTCCCCCGCGCCCTCGCCCTACCCGCCTGCACCGCCACCGCCCGACCCCACAGGATCCGTAGAGGAAGCACAGCAACTCGCGCAACAACAAGCTCAACAACAacagcagcaacaacaacaGCAGCAGCAACAAACGTCCCCTGAGCATATGCAAGTAGAACAGCAGCTTCAGAATCAGCCACAGTCGCAAGCGCCCACGCAGGACCACCTCGACAGAACGCCTTGCTTCATCCCACAGCCAGATTTACAGCAGCAATACACGCCTTATTTCAAAGAAACGAGGCCCACGAGCCATATGCTCGGGACCGGCGGATTTCCACTGCATTACCTGAAGCAGAACGGAGGCGTGCTATCGCTAGAGGGCCCGCTCGATCAGTACGGGACACCAGATTTACGCCATTTACCCGACATAGTACAACCGGAGCAGCCAAAGCCGCGGAAGCATAATCCAAACTCGGAGCTGCGGCTATTCAAGTGCCTGACGTGCGGGAAAGATTTTAAGCAGAAGTCAACTCTGCTGCAACACGAACGCATCCACACGGACTCGCGGCCGTACGGCTGCCCCGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCACCTGACCCAGCACCTGCGCATCCACGCCAACGAGAAGCCGTACGCGTGCGTCTACTGCCCGCGCTCCTTCCGCCAGCGCGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGTCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATGCCCCCTCCCGCCCCGCACGCGGCGCCGGCACCGCCCCGAGCGCTGCCTGCGCCGCCGCGTTCCCGCCGCCCCGCACGTTCGATTCGCTCTCGCATCCATTGGCCTTCCTAACGGACAAATTCTCGGTCCCCGCGCCGCTCGCTCGGTGGCGGCGCGCGCGAGACGCGGAACCGACAGCCGGCCGCTCCCGTAACCACGTGTCGCCGCACCTCATCTTCAAGAACGGGAGCACGCCGACGCTGTGGCCGCAGGACGTGCCCTACCCGCCCGACGAGAACAAGGAAGAGATCCAGTCGCAGTTCGGCGACGGCGAAGCCGCCGGCGGCGAGCAGCGCGGCACCTGCTTCTCTCCCGGAGACACGGCGCAGTACCCTGCCTACTTCAAGGACACCAAGGGGCTGAACCACGCCGTGTTCGGCTCCGGTCTCAGCCTGCAGTACCTCAAGGGCGGCAAGCTGCCGGACGTGCTGGGTGGCCGAGCCATGCCGCTATACGTGCGCTGCCCTATCTGCCAAAAGGAGTTCAAGCAGAAGTCGACGCTGCTACAGCACGGCTGCATCCACATCGAGTCGCGCCCCTACCCCTGCCCGGAGTGCGGCAAGCGCTTCCGGCAGCAGTCGCACCTCACGCAGCATCTGCGCATCCACACCAACGAGAAGCCGTACGGCTGCGTCTATTGTCCACGCTTCTTCCGCCAGCGCACGATCCTCAACCAGCACCTGCGCATACACACCGGCGAGAAGCCGTACAAGTGCACGCAGTGCGGGAAGGACTTCCGCCAGAAGGCGATCCTGGACCAACACACGCGCACGCACCAGGGTGACCGGCCGTTCTGCTGCCCGATGCCCAACTGCCGGCGGCGATTCGCCACCGAGCCCGAGGTGAAGAAGCACATCGATAACCACATGAACCCGCACGCGGCGAAGGCGCGGCGCGCGGACGGCAGCAAGACGCCGCGCCCGCTGCCGCCGGCCGCCGCGGTCGTCAAGCCGGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCGTTCCAGCAGTTCCCGCCGGCCGGCGAGTTCAAGCCGGCGGTGGGCCCGGGCGGCTGCCTGCCGGCGCAGTGA
Protein Sequence: MVALLIFEADNTTAPYVLYKDGVERAPPGTQWGGAVLDGGYQPMQHQSPSGPSPQPEPQLVSPAPSPYPPAPPPPDPTGSVEEAQQLAQQQAQQQQQQQQQQQQQTSPEHMQVEQQLQNQPQSQAPTQDHLDRTPCFIPQPDLQQQYTPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEGPLDQYGTPDLRHLPDIVQPEQPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCVECGKHFRQKAILNQHVRTHQGERYSHIYAPSRPARGAGTAPSAACAAAFPPPRTFDSLSHPLAFLTDKFSVPAPLARWRRARDAEPTAGRSRNHVSPHLIFKNGSTPTLWPQDVPYPPDENKEEIQSQFGDGEAAGGEQRGTCFSPGDTAQYPAYFKDTKGLNHAVFGSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADGSKTPRPLPPAAAVVKPELYFPQCYAPPFQQFPPAGEFKPAVGPGGCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772240;
90% Identity: iTF_00206323; iTF_00926838;
80% Identity: -