Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467107.1:28039162-28051969[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0018 0.13 13.2 4.5 1 23 225 248 225 248 0.97

2 12 0.0033 0.24 12.4 1.6 1 23 257 279 257 279 0.95

3 12 3.8e-05 0.0027 18.5 0.5 2 23 286 307 285 307 0.97

4 12 0.00024 0.018 16.0 0.2 1 23 313 335 313 335 0.98

5 12 0.00012 0.0086 17.0 0.7 1 23 344 366 344 366 0.97

6 12 3.6e-05 0.0026 18.6 0.7 2 23 373 394 372 394 0.96

7 12 7.4e-05 0.0054 17.6 5.4 1 23 400 422 400 422 0.99

8 12 3.3e-07 2.4e-05 25.0 1.2 1 23 428 450 428 450 0.99

9 12 3.4e-08 2.5e-06 28.1 1.3 1 23 456 478 456 478 0.99

10 12 4.4e-05 0.0032 18.3 0.8 1 23 484 505 484 505 0.97

11 12 0.017 1.3 10.1 1.6 2 23 512 535 511 535 0.90

12 12 8e-06 0.00058 20.6 2.1 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0018	0.13	13.2	4.5	1	23	225	248	225	248	0.97
2	12	0.0033	0.24	12.4	1.6	1	23	257	279	257	279	0.95
3	12	3.8e-05	0.0027	18.5	0.5	2	23	286	307	285	307	0.97
4	12	0.00024	0.018	16.0	0.2	1	23	313	335	313	335	0.98
5	12	0.00012	0.0086	17.0	0.7	1	23	344	366	344	366	0.97
6	12	3.6e-05	0.0026	18.6	0.7	2	23	373	394	372	394	0.96
7	12	7.4e-05	0.0054	17.6	5.4	1	23	400	422	400	422	0.99
8	12	3.3e-07	2.4e-05	25.0	1.2	1	23	428	450	428	450	0.99
9	12	3.4e-08	2.5e-06	28.1	1.3	1	23	456	478	456	478	0.99
10	12	4.4e-05	0.0032	18.3	0.8	1	23	484	505	484	505	0.97
11	12	0.017	1.3	10.1	1.6	2	23	512	535	511	535	0.90
12	12	8e-06	0.00058	20.6	2.1	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGGAAACTCCTAACCTAGACGCGGATAATGTCGATACGAGCCGTTCGGAAAAcagcaaagaaaatataattgaaattgaaataccCTACCCATTATACCAATATTTGAGTTCAGAGAAATGCAATTTACAGCATATTTGTCGTATATGTCTCTCTGTCAATGACCCAGTTCTGTACCCATTATTCTCTGCTAAAGAACAGTGTGTTCTAGCAAATATGTTTATGGCTATATCTGAAGTACAGACGAGTCCAGAAGATGGATTGCCCTCAAATATATGCTCTGCATGTCAAACAGAATTAATGAactattatgaatttaaaataaaatgtgttaagtCTGACTACACACTGAAATCTGTATTAAAAGGAGAATTTTTAACAAATGAGAAAACTAGTGCAAATGAGgatgaaACCCAGTCCAAAACAGAACCAGAAACAGGTGACAGTATATTAAAGGACATCAAAGATGCTGTACCTTCAATTGAAGTAAATGAaggttttaattatttagaagATCTAAATGGAGCCATCAGTGATGATGAAGCACTTTGTATAGTGCAGGACAGCAATGATCAAAAGGAAATCACCATTATACAAAGTGATCAAAAAGCACACTCTGTGAAAACTAAAGACATAAGTAAAGAAAATGAAACTCACTCAAAAAAAGGAAACCACAAGTGCACATTATGCCCAAAGAAATTCCACAAAGCTAAGTTACTACAAGATCATATCAGCAAACTTCACGAGGCAGTGGCATCAGAATGTCCGCATCCATGCGAACATTGCAAGGAGGCCTTCGACTCAGAGTTCGATCTCAAGATTCACAGCATGCTGCATAATCAGGGATCTGCATGGACATGTACTCAGTGCCAGAAAGAATTTAAAGGGCGAGCGGCGCTCCGACGCCATATAGAGCGTCACATGGCGCGGCGGCGGTTCACGTGCGCGCGCTGCGGCGCCGCGTTCGTGGAGCGGTACGCGCTTCGGAGACACTCGCGCGTCCACACCGGGCAAGTCGCCGAGAAAAAGCACAAGTGCACTGAGTGCGACAAGAGGTTCTCGTGGCTGGGTGCGCTGACGGCGCACATGTACGTACACGGGGCGGGACGCGCTTGCGTGTGCAACGTCTGCGGCAGCGCATTCGCGTCACAGCGACTGCTCACATCGCACCAACGCGTCCACTCCAACGACAAGCCATATGAGTGCACCTACTGCGAAAAACGATTCCGCCACGAGTCGACGCGGAACACGCACCTGCGTACGCACACAGGCGAGCGGCCGTATGTGTGCGCGCAGTGCGGGAAAGCCTTCATacaacactccaacatgacgcTGCACATGAGGACTCATACCGGTGAGAGGCCATATTCGTGTACAATGTGCGATCGGATGTTTTCGTCCAGCTCCACACTCAAGGCGCACATTCGGACCCACACTGGCGAGCGGCCATACTCATGCAACGTTTGTGGAAAaagGTTTGCGCGCGTGAGTCTGAAGAACCACATGCGTCTGCACAGTGGGGAGCGACCGCACGCGTGTCCTGCGCCCGCTTGTCTCAAGCGTTTCACCACCCCTCACCGTCTCAAGGAACACTATCGTCTCCATACAGGTGAAAAACCATTTGAATGTGCCAACTGTACCGAAAAGTTTACGACGAAATCTCAGCTCATGAAGCATGTAAAGAAACACGTGAAGAAACACGAGAAGAAAAAGAAAGCGGGGAAAAAGGGCGTCATGTTAATGCCAGTCACAGTTTCTGACAAAAATCTGCATCCGGCCACCGATCCTCAGCCAGCAGAGTCAGACCAATTTGTGTTTGTTGGTATAAATGAAGCAGTACCAAACGCGAATCAATCTAATTTATGTACAGTACATGAAACTCCTTTAAAACCCCCcgaaaaatttatatttgaaaatgatattgacaacattaaaacaaatctcATTGTTCTTGATAACCCGAATGTAGTTACTAACCATGTGAGTTATTTGAATGATGTTAATTACACTAATGATGTGAATTTAGTTACGGTAAATGAAGGAGAAGTCAGCATATCGGCAGCAAGTGCAACTGTAGACGGGACAACAGTCAAACTGTATCAGTACGACCAAAGTTTATTACAAATTCACACTGGCGGTGGTCAACTAACTATAAGTAGAATAAGTAGCAAAATGACAACAAATTATTAG
Protein Sequence: METPNLDADNVDTSRSENSKENIIEIEIPYPLYQYLSSEKCNLQHICRICLSVNDPVLYPLFSAKEQCVLANMFMAISEVQTSPEDGLPSNICSACQTELMNYYEFKIKCVKSDYTLKSVLKGEFLTNEKTSANEDETQSKTEPETGDSILKDIKDAVPSIEVNEGFNYLEDLNGAISDDEALCIVQDSNDQKEITIIQSDQKAHSVKTKDISKENETHSKKGNHKCTLCPKKFHKAKLLQDHISKLHEAVASECPHPCEHCKEAFDSEFDLKIHSMLHNQGSAWTCTQCQKEFKGRAALRRHIERHMARRRFTCARCGAAFVERYALRRHSRVHTGQVAEKKHKCTECDKRFSWLGALTAHMYVHGAGRACVCNVCGSAFASQRLLTSHQRVHSNDKPYECTYCEKRFRHESTRNTHLRTHTGERPYVCAQCGKAFIQHSNMTLHMRTHTGERPYSCTMCDRMFSSSSTLKAHIRTHTGERPYSCNVCGKRFARVSLKNHMRLHSGERPHACPAPACLKRFTTPHRLKEHYRLHTGEKPFECANCTEKFTTKSQLMKHVKKHVKKHEKKKKAGKKGVMLMPVTVSDKNLHPATDPQPAESDQFVFVGINEAVPNANQSNLCTVHETPLKPPEKFIFENDIDNIKTNLIVLDNPNVVTNHVSYLNDVNYTNDVNLVTVNEGEVSISAASATVDGTTVKLYQYDQSLLQIHTGGGQLTISRISSKMTTNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00206313;
90% Identity: -
80% Identity: -