Basic Information

Insect: Biston stratarius
Gene Symbol: -
Assembly: GCA_950106695.1
Location: OX467108.1:28927927-28946257[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00064 0.047 14.6 2.5 3 23 726 746 725 746 0.98

2 15 4.4e-05 0.0032 18.3 5.3 1 23 752 774 752 774 0.97

3 15 0.00012 0.0087 16.9 6.7 1 23 780 802 780 802 0.97

4 15 0.00012 0.0086 16.9 6.5 1 23 808 830 808 830 0.97

5 15 5.7e-07 4.2e-05 24.2 1.9 1 23 836 858 836 858 0.98

6 15 5.9e-05 0.0043 17.9 7.9 1 23 864 886 864 886 0.98

7 15 3e-05 0.0022 18.8 6.6 1 23 892 914 892 914 0.98

8 15 5.3e-06 0.00038 21.2 5.2 1 23 920 942 920 942 0.98

9 15 9.7e-06 0.00071 20.4 5.0 1 23 948 970 948 970 0.96

10 15 1.3e-05 0.00094 20.0 5.2 1 23 976 998 976 998 0.98

11 15 3.6e-06 0.00026 21.7 6.0 1 23 1004 1026 1004 1026 0.98

12 15 7e-05 0.0051 17.7 7.9 1 23 1032 1054 1032 1054 0.97

13 15 2.3e-06 0.00017 22.3 5.2 1 23 1060 1082 1060 1082 0.98

14 15 0.00046 0.034 15.1 1.1 1 23 1089 1111 1089 1112 0.95

15 15 0.2 14 6.8 4.7 1 23 1120 1142 1120 1142 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00064	0.047	14.6	2.5	3	23	726	746	725	746	0.98
2	15	4.4e-05	0.0032	18.3	5.3	1	23	752	774	752	774	0.97
3	15	0.00012	0.0087	16.9	6.7	1	23	780	802	780	802	0.97
4	15	0.00012	0.0086	16.9	6.5	1	23	808	830	808	830	0.97
5	15	5.7e-07	4.2e-05	24.2	1.9	1	23	836	858	836	858	0.98
6	15	5.9e-05	0.0043	17.9	7.9	1	23	864	886	864	886	0.98
7	15	3e-05	0.0022	18.8	6.6	1	23	892	914	892	914	0.98
8	15	5.3e-06	0.00038	21.2	5.2	1	23	920	942	920	942	0.98
9	15	9.7e-06	0.00071	20.4	5.0	1	23	948	970	948	970	0.96
10	15	1.3e-05	0.00094	20.0	5.2	1	23	976	998	976	998	0.98
11	15	3.6e-06	0.00026	21.7	6.0	1	23	1004	1026	1004	1026	0.98
12	15	7e-05	0.0051	17.7	7.9	1	23	1032	1054	1032	1054	0.97
13	15	2.3e-06	0.00017	22.3	5.2	1	23	1060	1082	1060	1082	0.98
14	15	0.00046	0.034	15.1	1.1	1	23	1089	1111	1089	1112	0.95
15	15	0.2	14	6.8	4.7	1	23	1120	1142	1120	1142	0.98

Sequence Information

Coding Sequence: ATGAAGAAACGGCTGACTATGCCGTCACCTACCGCACCTGTAAACATGTCTACAGGAGAGGAGCAAAGCTCATCAGAGCCGACGCTGACCTCACCCAGTACATCGGGCAATCTTAGCTCTCCACGAGACGGGCGTAGGGGCGCCCGCTCAACTGAGGACAGATCGACCCGGAACCTGAATATATCTACAAGCCATGGGGCCAATGCCACCCCGAAACCGACGGTTACCTCACCGCCGCTCACTATGTCTACGCCTTCAAAACCTCTACCGAGGACACGACCGGTCGTGGCTAGCTACCCGGCACCACTACCGCAGAGAGCAACGCGACAGCCAGAACACTCCCGCAAGCACGTTGTCACCCCGCCAGAGCATTCTCAGGCGAAGGTGCTCGTGCTTTCAGCACCTGCATCGCCATCACCACCACCCAGCCCAGTGAAACGAGATGTGCACACTCCATCATCAATACAGCGTACAATGGTCGAAGTATCCGACCAGTCGGAGTACGCGGACCTGGAACCGCAATCCTGCCCGGCTCCAACGTCACCATCACCGGCAGCAGCAACAGCGTCTTACGCGACTGCGCTGCGATCACCACCGCAGCGGCGGGCCGTATCGCCCACAAGTGGGTGCTCGTCCCCGGAACCGCGAGCGACGACCACCGATGGTAGTAGGAATTATCCTCCCATCGTGGTCGATGCACTGCCGGACTGGCCTTTCCATCTGGGGGAGCTGAGGCGTAGGTTGGGCCATATACCTAACGCCCGCCCCCTCGACAAAGGAGTAAGGTTCCGCCCTAAATCAGCCGAGGAGTTTAGGGCGGTACAAGATTACCTTACTGAGGCCCAGCAGCAGAATCCGGGAATAGCATGGCATGGCTATTCCCTGGGGTCCATGAAGCCACACAAGGTGGCGCTATGGGGCCTCCCCGAGGGCACAGAACCCTCTGTTATCAAGCAAGCCCTTATCAGTTTAAACTTCCCGGCGACCTTCGTCAGGGTGCTGCCGAAGAGGAAGAACGCCAGGAAGACAGTTTTCTTCATCCAGCTGGACAATATGAAGAAGGACCAGCTGGCACGCCTGTACGATACGACTGAACTGCTCAACATGCCCCGAGTGGTTATTGAAGGGTGGAGGGGCGGCACTACAGTACCACAGTGCCATAGGTGCCAGCAGTTTGGCCACGCCTCCGCCAACTGCCACCGCCCCAAACGGTGCGTGAAATGCGCCGGCCCTCATTTCGGGTCAGAGTGCCCGAAACTGGCAGGATGGCCATCTATATGTGCCAACTGCCGCGGTAGCCATGCGGCTAACAGCCGGCAATGCGCTGTGTTCAGGAGGGAGGCCAGGAAGCGCAATATTCGCATCCCCGGCGACTTCCGGCCTCCGGCACAGCACCTAGACAACAAACAATCCGAGACGCATCAGCGGAGCCGACGAGCATCACAGGGCGGGACCGCGGCCGGACAGACGGGCCCACCTGTCCCGACACCCGCCCCAAGGACACGTTCGACTTATACACCAAGCAAGCCGACACAAGAAGAGCCTCGTAGGGGCCCTCAACTAGAAGAAAGGCCTGTGACTACGCTCAGGCCGCCTGCTAACTTGCCGGGCACCTCTGCTCCCCAGAAGAGGAGCAGAAAACGTAGGCGCCCAGCCAAAAACCAAAATCAAGCGCCAAGAGTCGCGTCCGAGATCCCGCCGACACAAGCTCCGTCCACTCGTGTACCTCGGCACGAGTGGCGTAGAGCAACCGGCGGTAAGGACGTGACAAAAGTTTCGGGCAAACCGAACCAGATAGGTCGGAGGAGGCCCGCGCCGGCGCTATCTGCAGAGCGCGGCGCAGGAACTAGGCCTAACACTGGGGCCCGTGCTGCCCGAACACTACGTGCAACAGTAACACAATCCAGAGGACCACAACAGCAGCCCTCTCGAGCAACACGCCCAACGGCCCCGAGAGACTATCCGGAGCCGAACAATACCCACCCGAGATCGGGCGAAAAGACGACCACAAACCGGGATGCGATTATGCAGATAGTACGCATCCTGGTGGAGCTGGTCGCATCAATCGCTGCGGGGGAGGACATACGCAGCGCGGCTAACGTGGCACGCGTGGCGGCCGCTGTTAGTTATTTAACGGACAGCGGTGAAGAGCGTTCCTGCGGGAACGCCGGGGCATGTGAATTCTGCGCGAAAACGTTCACTCGGAAGGAGCACATGGTAAACCATGTGAGGAAGCACACGGGCGAGACGCCTCACCGGTGCGACATCTGCAAGAAAAGCTTCACCAGGAAAGAACACTTTATGAACCATGTTATGTGGCATACAGGCGAGACCCCCCACCGATGCGACTTCTGTTCAAAAACATTTACCCGTAAAGAACATTTGCTAAACCATGTGAGACAACATACCGGCGAGTCTCCACACCGCTGCAACTTCTGTTCGAAGTCGTTTACAAGGAGGGAGCACCTCGTGAACCACGTTCGACAACATACCGGAGAAACGCCCTTCCAATGCGGATACTGCCCTAAAGCATTCACTAGGAAAGATCATCTCgTGAACCACGTCCGCCAACATACGGGAGAATCTCCCCATAAGTGTTCATTCTGCACCAAGTCGTTCACCCGTAAAGAACATTTAACGAACCACGTGCGTCAGCACACTGGCGAATCGCCGCATCGCTGCACGTACTGCGCCAAGTCATTTACTAGGAAGGAACACCTTACCAACCATGTCAGACAGCACACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGAGAGCGTTCTCGCGCAAGGAACACCTCAACAACCACGTGAGACAGCACACGGGAGTCACGCCACACGCCTGCTCTTACTGCAACAAGAGCTTCACCAGGAAGGAGCATCTTGTCAACCATGTCAGGCAACACACGGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTCTCTCGCAAGGAACACCTCACGAACCACGTGAATCTCCACACAGGGGAGACGCCGCACAAATGCCCCTTCTGCACTAAGACTTTCTCGAGGAAAGAACATCTCACCAACCATGTCAGAATCCACACGGGCGAATCCCCGCACCGCTGCGACTTCTGCCAAAAGACGTTCACGCGCAAAGAGCATCTTACAAACCATCTAAAGCAACACACGGGCGACGCGGCGCATACCTGCAAGGTCTGCTCGAAGCCTTTCACGAGGAAGGAGCATTTAATTACGCATATGAGATCTCACAGTTGCGGTGAAAAGCCGTACAGTTGCGGAGAGTGTGGCAAGTCGTTCCCACTGAAAGGCAACCTCATGTTCCACGAACGATCGCACCACaagggcggcggcgcgcgccccTTCCGCTGCGACGTCTGTTTGAAGGACTTCATGTGCAAAGGGCATTTGATCTCACACCGGCGCATGCACGCGGACGCGGGCGCGACTCCAGCGACGGATGCGCGCCCGGCAGGAGACGACTGCTCCGCAAAATGCGTCAAAGTGGAAAACGATCCACTCGCGCTCGAGACCAAACCCAAAGTTGAAGAAGCTCGGCAAACTGAAAACATCATTGTCACACACCCGCAAGCTTCGCCAAACAACGCTCCTGAGATGCAGATAACAAACCAACAATCTCGCTCTGTGGCCGTATCGAGTGCATCTGGCATCTCATCAGCAACGTTCACTCATACGGTGGCCCCACAGCACCACGCTGGCGCGGCCATTGCGCACCATCCCGTTAGCGTAACCTACTAG
Protein Sequence: MKKRLTMPSPTAPVNMSTGEEQSSSEPTLTSPSTSGNLSSPRDGRRGARSTEDRSTRNLNISTSHGANATPKPTVTSPPLTMSTPSKPLPRTRPVVASYPAPLPQRATRQPEHSRKHVVTPPEHSQAKVLVLSAPASPSPPPSPVKRDVHTPSSIQRTMVEVSDQSEYADLEPQSCPAPTSPSPAAATASYATALRSPPQRRAVSPTSGCSSPEPRATTTDGSRNYPPIVVDALPDWPFHLGELRRRLGHIPNARPLDKGVRFRPKSAEEFRAVQDYLTEAQQQNPGIAWHGYSLGSMKPHKVALWGLPEGTEPSVIKQALISLNFPATFVRVLPKRKNARKTVFFIQLDNMKKDQLARLYDTTELLNMPRVVIEGWRGGTTVPQCHRCQQFGHASANCHRPKRCVKCAGPHFGSECPKLAGWPSICANCRGSHAANSRQCAVFRREARKRNIRIPGDFRPPAQHLDNKQSETHQRSRRASQGGTAAGQTGPPVPTPAPRTRSTYTPSKPTQEEPRRGPQLEERPVTTLRPPANLPGTSAPQKRSRKRRRPAKNQNQAPRVASEIPPTQAPSTRVPRHEWRRATGGKDVTKVSGKPNQIGRRRPAPALSAERGAGTRPNTGARAARTLRATVTQSRGPQQQPSRATRPTAPRDYPEPNNTHPRSGEKTTTNRDAIMQIVRILVELVASIAAGEDIRSAANVARVAAAVSYLTDSGEERSCGNAGACEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGVTPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDAAHTCKVCSKPFTRKEHLITHMRSHSCGEKPYSCGECGKSFPLKGNLMFHERSHHKGGGARPFRCDVCLKDFMCKGHLISHRRMHADAGATPATDARPAGDDCSAKCVKVENDPLALETKPKVEEARQTENIIVTHPQASPNNAPEMQITNQQSRSVAVSSASGISSATFTHTVAPQHHAGAAIAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -