Bstr002878.1
Basic Information
- Insect
- Biston stratarius
- Gene Symbol
- -
- Assembly
- GCA_950106695.1
- Location
- OX467107.1:12962862-12965120[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-11 2.4e-08 34.0 0.0 2 37 16 51 15 57 0.94 2 2 7.9 7.6e+03 -2.8 0.0 14 23 137 146 132 147 0.75
Sequence Information
- Coding Sequence
- ATGGGTAAGCCCTATAAAAGAAAGACATCCAGAGCATCGTGGACAGCTGAAGCTCTGGATGAGGCGATGTCAAAGGTCACCAGCAAGGAATTGGGAATTAACCAAGCCAGCAGGGAGTATGGCATTCCTAGTCGGACCCTTAGAAGACATCTTGCATCAGGCAAAGGTAAAGGGCCATTAGGTAGATGTCCGGAGCTAGGGACCgaatatgaaaagaaactcGTCAGTCATATTCAAGCTCTTGAAAAAGTTGGATTTTCACCTAACAAAGACGACGTTCAGAGATTGGCTTACGCTTTAGCTGAAAAAATGAATTTGGATCATAGATTTTCACAAGAGAGACGAAGAGCTGGTGATGACTGGTTCTATGCCTTTATGCGCCGTAATAAAGAAATAGTGTTGCGTAAGTCTGAGGGTTTATCTTTAGCCCGTGCACAAGGAATGAACCGCAAAGATGTTGAAGAGTACTTTGATGTGTTGAAAAATATTCTGATAGAAAACGACTTGGTTGATAAGCCAGGTAAAATCTATAATGTTGATGAAACTGGAATTCAGGTCAATAACAAACCCGGTAGAGTATTAGCTACCAAAGGAGTTAAAGGAGTTTATACCATAACAAGTTCGGAAAAAGGCGAAAACATCAGTGTTATTGCATGTTGCAGTGCAGAAGGGCAGTTCTTACCGCCAGTTCTTATTTTTaaaggtaaaaacaaaaaaccagaGTTTTTTGAAGGGTTACCACCCGGATCTGACGTGTATATGAATCAGAAGTCGTCATACATTAACAGCGACTTGTTCTTTAAGTGGTTTACAGAGcattttttaccaaaaaaaggCACAGGAAAGGCGCTGTTGCTTTTGGATGGTCATGGTTCACACAGCAATTCGATTGATTTGCTTGAGGCAGCTTCTGCAAACGATGTCATACTTCTTTGCTTTCCCAGTCATACGACTCATGCTTTGCAGCCACTAGACCGTGCGTTTTTCAAACCATTCAAGACTTATTTCAATcaagaaacaaaaatgtggATGACCAATCACAAAGAAAGAAAACTGACCCGCTACTACATTTCTCAGTTAATTGGAAACGCTTGGTGTAAGGCCGCTACTATATCCACAGGTATATCAGCAATGCGATGCACGGGAGTGCACCCATTTAACCCTTTAGCAATACCCGATTACTTCTTTTGCATCGACGTTTCTAGCAATAAATCTCAAGAATGCAGTTCTTCAAACACACTTGAAGACCAAGTAGCAGTTCCATCTACAAGTGGTTTCTTCAGTACAGAAATGCCGCCAACTTCTTCGAGCAGTCCAGAAGCGTTGATTGCAAGCTTTCCAAGTAGAAGTTCTCATCAAAATCTGGCACCACCTGTTGAAAATCCTGAGCCTTCCCCAGAGGCTACGTCGGAGTCCTCATTCAATGACCTAAATATTAGACCAGATTCTCCATCTATTATGAACCCAGATGTTTCAGTTATGCTGCCAATAAACAGCTTAAATCCCAGACTAAAACCAAATAGCCCTGATACGAGACCTGGCCCGTCAATCAGCATTCCTAATGAAGTATCTGAGTCTCTATCTAACAATTCTTCTCAGGCAAGTGGCTCTGATCCTAAAATACAAGCTACATCTAAATCGGCTGCTGAGAAAAAGGAAACGCCATCAAAGGTGTTAAAAGACATTCGACCTATCCCTGTTATACCCTTATACCAAGCCACAAgcagaaaacaaaagacaacAGTATTTACATCACCTGAATTTATTGCcaagaaaacaaaactaaaggaaaataaacaaaaacctaaacaaaaaacaaccaAGGACAAAGAGAATAAAGGAAAACTTGTTAAAAGAGTTACTCGAAAGAAAAAGAATCAGGATTTAAGTTCTTCCGAATCTCAAGAAGAAACGGAAAAGGATTTAATTGACGAACAGACTGAAAAGAAAAAGCAAgtaatcaacaaaaaaagaaaagtaggaAACAATACTaagagaaatataaaaaagaaaaagtgccAGCCTTCTTATTCTTCTGAATCTCAAGAAGAAGACATAGAAATAGCTTCGTCAAGTGAACAGACTGATATTGAAGAGAACGCTTGTGTTGAATGTTTGGAAGATTATAATATAACGAAGAGACAAGTAGACTGGATACAGTGTACAAGATGCTTGAAATGGTTGCATGAAGATTGTACAATGTACAACAATCTGTGTAACAAGTGTGGCCGTTACAATGTACGACACCAAAACAAGTAA
- Protein Sequence
- MGKPYKRKTSRASWTAEALDEAMSKVTSKELGINQASREYGIPSRTLRRHLASGKGKGPLGRCPELGTEYEKKLVSHIQALEKVGFSPNKDDVQRLAYALAEKMNLDHRFSQERRRAGDDWFYAFMRRNKEIVLRKSEGLSLARAQGMNRKDVEEYFDVLKNILIENDLVDKPGKIYNVDETGIQVNNKPGRVLATKGVKGVYTITSSEKGENISVIACCSAEGQFLPPVLIFKGKNKKPEFFEGLPPGSDVYMNQKSSYINSDLFFKWFTEHFLPKKGTGKALLLLDGHGSHSNSIDLLEAASANDVILLCFPSHTTHALQPLDRAFFKPFKTYFNQETKMWMTNHKERKLTRYYISQLIGNAWCKAATISTGISAMRCTGVHPFNPLAIPDYFFCIDVSSNKSQECSSSNTLEDQVAVPSTSGFFSTEMPPTSSSSPEALIASFPSRSSHQNLAPPVENPEPSPEATSESSFNDLNIRPDSPSIMNPDVSVMLPINSLNPRLKPNSPDTRPGPSISIPNEVSESLSNNSSQASGSDPKIQATSKSAAEKKETPSKVLKDIRPIPVIPLYQATSRKQKTTVFTSPEFIAKKTKLKENKQKPKQKTTKDKENKGKLVKRVTRKKKNQDLSSSESQEETEKDLIDEQTEKKKQVINKKRKVGNNTKRNIKKKKCQPSYSSESQEEDIEIASSSEQTDIEENACVECLEDYNITKRQVDWIQCTRCLKWLHEDCTMYNNLCNKCGRYNVRHQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00206930;
- 90% Identity
- iTF_00206930;
- 80% Identity
- iTF_00206930;