Bstr004114.1
Basic Information
- Insect
- Biston stratarius
- Gene Symbol
- -
- Assembly
- GCA_950106695.1
- Location
- OX467107.1:37032080-37033915[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-15 6.4e-12 45.5 0.0 1 39 10 49 10 53 0.89 2 2 6 5.8e+03 -2.4 0.0 23 30 358 365 358 366 0.90
Sequence Information
- Coding Sequence
- ATGCCGCCGATCAAAAGGAAATCCTGGGACCACGATGCCATGATACGGGCCGTGAATGCAGTGCGAAGCAAGCAAATGGGTTACTTAAAAGCGTCAAAACATTTTGGTGTTCCTAAGGGTACCCTAGAACGTTATGTCAAGAAAGAAGCCAATGCAGAAGTACTTGTCAAGGTTCATATGGGAAGACCTCCAGCTTTGCCTGACTGTTTAGAAGCAGAactagaaaaatattgtaaagaatTGGACCAAAGATTTTATGGGTTACGACTGAAGGACATCAAGCACATGGCGTTTCAATTAGCAATTATAAATAATCTCAAGCACCCATTCAGCTTGACTAAAGCATCTGCTGGTAAAAAGTGGTTACGTGGGTTTATGAGCAGGCATCCTGCTTTATCAGTTAGAACACCTGAAGCAGTTTCTGCTGCAAGAGTAAAAGGATTCAATCCTATTGCCGTCAACCATTTCTTTGATTTGTATGAGccagaaattgaaaaaattaaatcaccTTCTCATCGAGTGTACAACGTTGATGAGACCGGGATAACAGTGGTACAACATAAACGTTCCAAAGTTATTAGCGTGAAAGGAAAAAGGCAGGTTGGAACGTTGACATCATTGGAAAGAGGAAAACTAATAACCATAGTGACGTGCATGAATGCTTCTGGTAGCTACATTCCTCCATTAATAATTTTTCCACGGAAAAATATGGCTCAAGAACTAATGGATGGTGCACCTGCCGGTTCTATAGGTGATTGTCATCCCTCTGGCTGGattcaaaatcatttattcacaaagtggtttcagcattttataaatttcacaAAACCAAGTAAAGATGATCCCATAATTTTGATTCTAGATGGTCACTACACACACACAAGAAATATTGATGTAATAAATTTAGGTCGAGAAAATAACGTAACAATAGTCTGCTTACCGCCACACTGCACACATTCAATGCAGCCAATGGATGTAGCGTTCATGAAACCGCTAAAGGCTTATTACTCCCAAGAAATTGAGACGTGGCTGCGAAATAACCCAGGACGAGCATTAACCAACAAATATGTAGCAAGATTATTTGGGATTGCCTATGAAAAAGCTGCAACTATGAGTAACTCTGTCAATGGTTTTCGTAAAACTGGGTTGGTTCCTtgtaatcgcaatatttttacagaaaatgATTTTACAATTTTCAATGACGATAACCAAGGAGGACTATCAGATCATAGAGTGTCAAATGAAAATCCGAAGGAATACCGTCCCGTAACTCCTTCGACCGAACATCCATCTAACATTACTGAAGCTTCCTCCAATCCCGCTGCCTTATATGAAAATCCAGAGCCTAGCACATCATCTCGGCACGTCTCACCTTTTGCAGTTAGGCCAGTGCCTAGACTACCTAGGAACGATTCGTCTAAGAAAACCCGAACTGGAGCAGCTTCCATAATTACTGGTTCTCCATATAAAAACTCGCTAATAGACTCCTTAAATAAAAAGACTGAAAGGGAAAATAAAGCGGGTAAAAATAAAGGATCTAAAAAGACTAATAAAAAACAGCAAACaagaaaaagtattaaaaaagttacgAAGAAAAAGAGATCTAAAGAGCCAGTGAGTTCTAGCTCTGAAGATGAAGTTTTACCTGATCTTGCAGATAGCAGCAGTGATGATGAATCATGTGACGCTGAATGTCCATACTGTAGCGACATCTAA
- Protein Sequence
- MPPIKRKSWDHDAMIRAVNAVRSKQMGYLKASKHFGVPKGTLERYVKKEANAEVLVKVHMGRPPALPDCLEAELEKYCKELDQRFYGLRLKDIKHMAFQLAIINNLKHPFSLTKASAGKKWLRGFMSRHPALSVRTPEAVSAARVKGFNPIAVNHFFDLYEPEIEKIKSPSHRVYNVDETGITVVQHKRSKVISVKGKRQVGTLTSLERGKLITIVTCMNASGSYIPPLIIFPRKNMAQELMDGAPAGSIGDCHPSGWIQNHLFTKWFQHFINFTKPSKDDPIILILDGHYTHTRNIDVINLGRENNVTIVCLPPHCTHSMQPMDVAFMKPLKAYYSQEIETWLRNNPGRALTNKYVARLFGIAYEKAATMSNSVNGFRKTGLVPCNRNIFTENDFTIFNDDNQGGLSDHRVSNENPKEYRPVTPSTEHPSNITEASSNPAALYENPEPSTSSRHVSPFAVRPVPRLPRNDSSKKTRTGAASIITGSPYKNSLIDSLNKKTERENKAGKNKGSKKTNKKQQTRKSIKKVTKKKRSKEPVSSSSEDEVLPDLADSSSDDESCDAECPYCSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00206925;
- 90% Identity
- iTF_00206925;
- 80% Identity
- iTF_00206925;