Basic Information

Gene Symbol
-
Assembly
GCA_950106695.1
Location
OX467120.1:5731470-5741066[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-12 3e-09 37.6 0.0 3 89 228 301 226 301 0.89

Sequence Information

Coding Sequence
ATGTTGCTTACAAAAGTTGATAGAAAATTTCTGGACGAAGTGCTTGCCATCAACGACAAGGTAGTTCTCCGAGCCGAGGACCTTCTTTCATGGATGTGCAATGGGCAGGACTGGACGTACGGCCTGAAGGCGGTGTGGCGCGGTGCGTGCGCTCCGCACGCTGACGAGAGGCACACTGCGCCTCTGCATTCCACAAGGCTCGACTTCTCCGATGTCGACAAGGAGAAGAACGCCATCGCTACTGATGCAGACAGTCCAGGCGTCGTGGTGTTCTCGTATCCCCGATACTGCCGGTACCGGGCGCTCCTCTCCCGGCTTGAAGGCATCCAGGCGGCCTGGCTGCGGGACTCGCTCGTTGCGGCTCTGGGTGGATACTCCGCCCCCACAAAGAACACCAGGATCCTGTACTGCAAGGATACCTTCGAATACCCCGAGCTGGAAGGTCACGAGTTCGTGTGCAACCACCTGGCTCCCAAGCTGAAGGGGAGGCCGCGCGGACGTCGTCGCCGCCCGCCGCGCTCGCGCACCCACTCCCCCGAGTCGCGCTCCAGTGAGGACGAGAGACCCCCACCGCCAGTTACCCATCACCCGACTCCCCGGCGCCTCTCCCTCCGCAACGGTCTCGAGAAACGCAGCTCTGACTCGGACCCGGACCGGGAGACGAACGTGACCGACGAGGACAAGGCGTTCCTCCGGATGCTGCGGCACTTCCACCGGGATAAAGGACTCAGCTTCACGCAGGCTCTTTCGCTCAAACATTTGTCGCTGCGAGCTCTGTACACGCTGGTGTTGTCGCGCGGCGGGTACGAAGCTGTGTGCCGGCTGCGACTGTGGCGCGGGCTCTTCCACTCCAACCACTCAACCACTAAAGCCGTTTACGAGAGGTTCCTCCTCCCGTTAGAGAACCACGAACGACGTAACGGTGTTAAACCTAACGGCATAACGGAGGCGGATACCATCACAGTATGCGACTCCCCCCCGCCACCCCTGCACGCACACAGAGACAGCGAGACTGgtgaaGTGAAAGAAGAGATGAACGTCACCTCAAAACCGGCAGAAGAACTGAACAGAGAATTTCTCGAGTCTCTACCCAAAGAAGAAAAACCTCTTAAAATAACAGTGAAACCCGTGGAAAAACTTATAGACACGGAAAAGAGAGAGAACGCCTTCGAGAAGAGAGAAAATGCGTTGGAGAAGAAAGATATAGGGTTGGAGAAGAGGGAGTTTGCGGGGGAAAAGAGAGAGCTTGATAATatagaagaaagaaaagaaggCTTTTTGAGTGAGCTCGCGAATAAGTTAAATTtgggTAACTCCGATACGACGTTCCTGCAAGAGCTGGCGCGACGCGGTGCAGCGCCCCCGCTTCCCGCCGCGCCGCACCCCCCCGCACCCAtcaacacacacgcacacattgaTCAGaAGGGTTCCCGGCCAGCGGGGCGAAGCTCCCTGCGCGCGGTGCGTGTCAAGCCCGCGCGGGCGCACACCGCTCCCAACACGGCGCCCAACACGCGTGAGTATATTATGTGTTTTGATTtataa
Protein Sequence
MLLTKVDRKFLDEVLAINDKVVLRAEDLLSWMCNGQDWTYGLKAVWRGACAPHADERHTAPLHSTRLDFSDVDKEKNAIATDADSPGVVVFSYPRYCRYRALLSRLEGIQAAWLRDSLVAALGGYSAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRPPRSRTHSPESRSSEDERPPPPVTHHPTPRRLSLRNGLEKRSSDSDPDRETNVTDEDKAFLRMLRHFHRDKGLSFTQALSLKHLSLRALYTLVLSRGGYEAVCRLRLWRGLFHSNHSTTKAVYERFLLPLENHERRNGVKPNGITEADTITVCDSPPPPLHAHRDSETGEVKEEMNVTSKPAEELNREFLESLPKEEKPLKITVKPVEKLIDTEKRENAFEKRENALEKKDIGLEKREFAGEKRELDNIEERKEGFLSELANKLNLGNSDTTFLQELARRGAAPPLPAAPHPPAPINTHAHIDQKGSRPAGRSSLRAVRVKPARAHTAPNTAPNTREYIMCFDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-