Bbet009110.1
Basic Information
- Insect
- Biston betularia
- Gene Symbol
- ZFX
- Assembly
- GCA_905404145.1
- Location
- FR989879.1:416367-423330[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.042 3.4 8.9 0.1 3 23 266 286 265 286 0.97 2 26 1.2 94 4.4 0.2 6 23 298 316 298 316 0.95 3 26 6.9e-07 5.5e-05 24.0 1.7 2 23 372 393 372 393 0.97 4 26 1.4e-05 0.0011 19.9 0.3 1 23 399 422 399 422 0.94 5 26 0.61 49 5.3 0.1 1 23 428 450 428 450 0.93 6 26 0.0059 0.47 11.6 0.1 1 23 456 478 456 478 0.98 7 26 0.083 6.7 8.0 0.4 1 14 484 497 484 498 0.88 8 26 0.034 2.7 9.2 4.2 1 23 627 649 627 649 0.98 9 26 0.03 2.4 9.4 1.8 2 23 656 678 655 678 0.92 10 26 1.2e-05 0.00094 20.1 2.0 3 23 686 706 684 706 0.96 11 26 8.4e-06 0.00067 20.6 0.1 1 23 712 734 712 734 0.97 12 26 0.0013 0.1 13.7 0.2 1 23 740 762 740 762 0.97 13 26 0.11 8.5 7.7 0.7 1 23 768 790 768 790 0.95 14 26 0.098 7.8 7.8 1.7 1 23 796 819 796 819 0.96 15 26 9.6 7.7e+02 1.5 0.5 2 23 888 908 888 908 0.89 16 26 8.4e-05 0.0067 17.4 0.0 1 22 914 935 914 937 0.90 17 26 0.004 0.32 12.1 6.9 5 23 946 964 943 964 0.96 18 26 0.0062 0.5 11.5 1.1 1 23 970 992 970 992 0.95 19 26 0.0023 0.19 12.9 0.3 3 23 999 1019 997 1019 0.95 20 26 0.00024 0.019 16.0 0.8 3 23 1027 1047 1027 1047 0.98 21 26 0.26 21 6.5 3.1 2 23 1277 1299 1277 1299 0.95 22 26 4.9e-06 0.00039 21.3 0.3 2 23 1306 1327 1305 1327 0.97 23 26 0.39 31 5.9 1.1 1 23 1333 1355 1333 1355 0.97 24 26 0.17 13 7.0 3.6 1 23 1361 1383 1361 1383 0.95 25 26 1.4e-05 0.0011 19.8 0.1 1 23 1389 1411 1389 1411 0.97 26 26 5.4e-05 0.0043 18.0 1.0 1 23 1416 1439 1416 1439 0.95
Sequence Information
- Coding Sequence
- ATGAACATCGACACAGAACAAGTGTTTATTGTGAACACTACGGAACTTAGAGTAGATCAGCACACACCAACACCCCTGCAGCGCGTTTTTGCAATGCCCTTGGATGGGGAACCGATTCAACGCGAAGATGAACAATCAAGTGGCTTATGCCTGCCGCAGACTATAGGTCCTCCTTCTCGCACACAGATGTGTCGGCTGTGTGCCACTGTTACCGAGATGGTGTTACCCATATTTGAAGGAGAGGGCTTACAAAATAACCTTGCAGATAAGATTCATCAGCATCTACCAATACAGGTGTCTGAGGATGATCTGCTGCCAGTAGTGATGTGCTTCCAGTGCACGAGCACTCTGCTGGCATGGCATGAGCTGGTTGTGTGCTCGGTGCAGGCCGACTCCGTCATGCGAGAGAGGTTCAAGCTCTCCTTCACACAACAGCAGCAACAACCCAATGCAATGTCTAGTCAGAACCAAATGAAAGACGAAAAGTCACAACCATTCCCTAAAATCATAAAAAGTGTACTCGCAGAGTACTTGCAGTCCCTAAGTATGGATTCTCAAGTGGAACTAGTCTGCCAGAGATGCGACTCCAAACGTGCTTTCACGACTTCTGATTTCACCGATCATCTCGTCACAACACACGGTTCAGAAGTTTGCGACGAAAATGCTGTAAATTCTTTCATAAAAGACTACGTTACGTTTGAGGAACCGCTCGTTTCCGATTTAGAATCAGACAGAGACGATTCTGACGTTACAGAGACACTGAATCCAATAAAACTAAAGTTATCCCCTTTACTCTGTCCGTACTGTGACAGCGCGTTTACGTCCGCGACCCGACTCGTATACCATCTCGGCAAACATATGGAGATATGCATCCATGACGGAATGAAATGTTGCGATTTCGTCTACAACACTAAGAAAGATTTCGTCACACATTTACAAGAGATGCACGTCAACAGACCCGTGAACGACGCCACGACTATGTGCAAAAGCTGCATCTTCACTGCGGAGTCTTCAGAACAATTGCAAAGTCATGTAGAAGAGTGTCACAGCGAAAGTAAAGTAAAAACAAAGCCTAAGAAAATGAGCGCGAAAAATCAGAAGTGCATCCCGGCCGTGTGTCCCGAATGCAACAAGACTTTCTCCAACAAATATAACATGTTCACTCACATGAAGTCTCACGAGGAGACGCCGTCGTACGCGTGCGATACATGCGGGAAGGAATATAGCACGAAAGGAAACTTGCGGCAGCACGAGAAGCTAATTCACGACGGGGAGTTGTCGCACGTTTGCGGCGCGTGCGGCGAGCGCTTCCCCACGCGCGTGGCGCGCGACGTGCACGCTCGCTTGCACACGGGGGACAAACCTTTCCGCTGCGAGCTGTGCAGCGCCGCCTTCCGCGCCGAGGACACGCTACTGCGCCACCTGGAGGTGCACCTCGACGTGCGACGGCACGCGTGCCAGCTCTGCGGCAAAACGTTCAGGAAACGGAGCGGCCATCCACTCGTTGTGAAACGGGAAAACGAAACCGAACGAAATCTTTACGACCTCGGCGACGCTGGCCATGGGACGGAGATTCACGATACGGACGACTCAGAGGATCGGCCGCTCGCGAGTCTCGTCGTCGACAGAGAGGAGGCGTTCCTCACGTTCTACGACGCGCTCGTGCGTTTTCGAAACCACGTCGCTAGCGAGCACGCCCCCCAGTCGCCTGAATCGGACTCCAGCGAGGAGAGCGCGGGGAAACCTACCTCCGGTGACCTGGGGGTGGATGCGTACGACGATCTGTCGCACCGAAACCGACGTCGGTCGAAGCTCGATATATCCACACGCGAGGAAATAGCGAACTCGCGCGTGCGGACCGAAGACGGGCGGGTCGTGTTTCAGTGTTCGACGTGCGGCAAACACCTGAGCTCGGCGCACACGCTGATCTTCCACCGACGGATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCGCGCAGTTCCGTGCGGCGCCCGGCCTTCAGCGGCACCTGCACGAGACGCACGAGCGGCGGCGGAGACTCGCGTGCCGCACCTGCCACCGGACGTTCGCCAACGCGCAGAACCTCAAACAGCACATGAGGATACACACAGGCGAGCGCCCGTACGAGTGTGCCGTGTGCGGCAAGACGTTCGCGCAGAGCGGGTCGCTGCACGCGCACCGCGCCGTGCATGGAGAGGCGCGACCGCACACGTGCGCCGAGTGCGGCGCCGCGTTCAGGTTGCGCGGCGGGCTGGCCCGCCACCGGCTCCGGCACTCGGGCGAGCGACCGCACGCGTGCGGGCTCTGCCCGCGCGCCTTCCGCGCGCGGCATGAGGCGCGCGCGCACCGTGCCTCGCACGGGGACGCACGCCCGCACACCTGCGCGCTCTGCCCGGCCGCATTCCGCGCGCGCCGCGCGCTGCGGCTGCACCACCAGCGCACGCACCGCGAGGACGCACCGCCGCCGCCGCCCGCCTCCACGCATCCGCCGCTCTCGAACCTCGCTCCGCCAGTCACGTGGCGTGGGTCACACGCCGCTGGTTTCAGAATCGATGTAGATGAACAAAAGCTGGAGTCGGAGGCCGAGCGGCCGCTGCGGGAGGAGGACGTGCCCCGTACGCTGGTGCGGGGCGAGGGGCGGGTGGTGGCGCGGTGCGGGGTGTGCGGAAGGAATGTGGCTTGCGGCGCGTGGCGGCGGCACGCGCGCTCGCACGCGGGCCACGCGCGTTTCCGCTGCGACGCTTGCGGGCGCGCCTTCTCCGACAGCGGCAACCTAGCTCGGCACGCGGCCGCAGTGCACTCCGCACGCCGCCCGCACGCGTGCCACTGCTCGCGCACGTTCACGCGCGCGGAACACTTACGCGAGCACCAGCGCACACATTCCCCGACGAAGGCATTTCTGTGCGACACGTGCGGCCATCGCAGCGCATCGCAGGCGGCGTTGCGCATGCATCGGCAGACGCACGCGCCGCCTGCACTGGCCTGCACGCACTGCGCTGCGCAGTTTAAGCGCGCGAGCGAGCTGCGCGCGCACGCGTCCGTGCACTCGGGTGAGAGACCGCACGGCTGCGCGCGCTGCGGGAAAGCGTTCCGGCTGCGCGCGCAACTCACCAGCCACCTGAAAACGCACAGGAACGAACCCACATGTACATCGGACGTTCGCTGCGAGCAATGCACGCACGCACCTCCCGACTGTCGGCTTCGCGCGCGTCCGTGCGCCCAGTGCCGCCTCCACCGCGCACGCGCCAACAAGCGACCTCACATACCCACATATACACACAAACAGAAAACACCTCGTCAGCCCACACCGGAAACGAAACAAACTCTCAAATTCAAACTTGTACCCAAAATACAACGAACACCCTCCAAGTCGCCTCTTGCGGAAACCTCTTTGGTGACGTCATCGCTTTCTTTGACGCTATTGGTCGATGATTCTACGAAGGATTCTATTGGTCGTTCACAAACGGACGTTGAGCCACAGCCATTGCGGAAAATCGACACGAAAGTAAGTGAAGAAAACACGGATCCACCAATAAAATTTAGTGATCTGGAAAACGAAGATTTTTCTCCTTCAAAACATGAAAGCATTCCGCGGGAACAGCAATCCGATCAGAAACACTCTAAAGAGCCGGAGACGGCCTCCCCAGAGCGAAGCAACGATTTTTCCGATCACAGCGATACAGAAAACGAATTCGGGCGTCTACCGGAATCCGTATTCGACGCCATCGAAGACTCGCAGGACGCTCACTCGGACGACGGCAGCCAAGGAGTTCCGGATACGGAAAAATCTGAAGCAAAAAAGCCAAACTTCCCGCGGTCGTGTCCGGTCTGCGAGAAACGTTGCAACTCCCTTTCCGGCTGGTATTACCACCTCAGACATACACACGGCGCCCGCAAGAACCTGACCTGTGACGATTGTAACAAAGTGTTCGCGACAAAGAGCGAGATGGCAACACATGCGCGTACGCACACGAAAGAGAAACCGTTCACATGCCGGACATGCCAGAGCGTGTTTTCATCTCGAGCCGGCCGGTACATTCATGAACAGACACATTTGGATAAAAAGGTTCACGTGTGCGGCCGCTGCTCGCGCGCTTTCCGCTGGCGCACGCACCTCCGCCGACACGAGGCGCGACACACCGCCGCCAAAACCCACGTGTGTCCGCAGTGTGGGCGCGCCTTCAGCATCGCTTTCGACCTCATACGTCACATCCGCGCGCACACCCCCGGCTGCCACCGTTGTGACGTCTGCGATGCGGCGTTCAAACAGAAGCGCTATCTTAAAGTGCACATGGAAAATATTCATCTGGCTAGAATTTCAACCTCCTCAGATACTACTAAGAAATCTTGTAGAAAAATTAAGGAACCTGTTCTAGCCATTTCGGATTTAGATCCAGCTTTACGTAGCATATCTCCTGACGCGAGCGGTAGTAACTAA
- Protein Sequence
- MNIDTEQVFIVNTTELRVDQHTPTPLQRVFAMPLDGEPIQREDEQSSGLCLPQTIGPPSRTQMCRLCATVTEMVLPIFEGEGLQNNLADKIHQHLPIQVSEDDLLPVVMCFQCTSTLLAWHELVVCSVQADSVMRERFKLSFTQQQQQPNAMSSQNQMKDEKSQPFPKIIKSVLAEYLQSLSMDSQVELVCQRCDSKRAFTTSDFTDHLVTTHGSEVCDENAVNSFIKDYVTFEEPLVSDLESDRDDSDVTETLNPIKLKLSPLLCPYCDSAFTSATRLVYHLGKHMEICIHDGMKCCDFVYNTKKDFVTHLQEMHVNRPVNDATTMCKSCIFTAESSEQLQSHVEECHSESKVKTKPKKMSAKNQKCIPAVCPECNKTFSNKYNMFTHMKSHEETPSYACDTCGKEYSTKGNLRQHEKLIHDGELSHVCGACGERFPTRVARDVHARLHTGDKPFRCELCSAAFRAEDTLLRHLEVHLDVRRHACQLCGKTFRKRSGHPLVVKRENETERNLYDLGDAGHGTEIHDTDDSEDRPLASLVVDREEAFLTFYDALVRFRNHVASEHAPQSPESDSSEESAGKPTSGDLGVDAYDDLSHRNRRRSKLDISTREEIANSRVRTEDGRVVFQCSTCGKHLSSAHTLIFHRRIHTGERPCVCHVCGAQFRAAPGLQRHLHETHERRRRLACRTCHRTFANAQNLKQHMRIHTGERPYECAVCGKTFAQSGSLHAHRAVHGEARPHTCAECGAAFRLRGGLARHRLRHSGERPHACGLCPRAFRARHEARAHRASHGDARPHTCALCPAAFRARRALRLHHQRTHREDAPPPPPASTHPPLSNLAPPVTWRGSHAAGFRIDVDEQKLESEAERPLREEDVPRTLVRGEGRVVARCGVCGRNVACGAWRRHARSHAGHARFRCDACGRAFSDSGNLARHAAAVHSARRPHACHCSRTFTRAEHLREHQRTHSPTKAFLCDTCGHRSASQAALRMHRQTHAPPALACTHCAAQFKRASELRAHASVHSGERPHGCARCGKAFRLRAQLTSHLKTHRNEPTCTSDVRCEQCTHAPPDCRLRARPCAQCRLHRARANKRPHIPTYTHKQKTPRQPTPETKQTLKFKLVPKIQRTPSKSPLAETSLVTSSLSLTLLVDDSTKDSIGRSQTDVEPQPLRKIDTKVSEENTDPPIKFSDLENEDFSPSKHESIPREQQSDQKHSKEPETASPERSNDFSDHSDTENEFGRLPESVFDAIEDSQDAHSDDGSQGVPDTEKSEAKKPNFPRSCPVCEKRCNSLSGWYYHLRHTHGARKNLTCDDCNKVFATKSEMATHARTHTKEKPFTCRTCQSVFSSRAGRYIHEQTHLDKKVHVCGRCSRAFRWRTHLRRHEARHTAAKTHVCPQCGRAFSIAFDLIRHIRAHTPGCHRCDVCDAAFKQKRYLKVHMENIHLARISTSSDTTKKSCRKIKEPVLAISDLDPALRSISPDASGSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -