Bbet023378.1
Basic Information
- Insect
- Biston betularia
- Gene Symbol
- -
- Assembly
- GCA_905404145.1
- Location
- FR989890.1:6290501-6296400[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1.2e-11 1.1e-08 35.5 4.5 2 43 9 47 8 48 0.96 2 10 1.8 1.7e+03 -0.3 1.1 14 29 207 222 199 231 0.78 3 10 0.14 1.3e+02 3.3 1.4 3 29 225 251 223 261 0.84 4 10 0.21 2e+02 2.7 0.3 14 30 264 282 253 289 0.71 5 10 0.019 17 6.1 0.4 10 27 289 304 282 309 0.79 6 10 0.052 48 4.7 1.2 10 38 311 339 306 340 0.82 7 10 0.026 24 5.6 0.7 18 29 346 357 343 367 0.84 8 10 3.5 3.2e+03 -1.2 3.6 13 38 369 391 362 398 0.69 9 10 4.8 4.4e+03 -1.6 1.8 6 29 391 414 387 428 0.74 10 10 0.038 35 5.1 4.6 13 43 426 453 417 454 0.80
Sequence Information
- Coding Sequence
- ATGAAGCGACGTGAGAGTTCTAGTTACGTGTGGGCACATTTTACGAAATCGAATCAAGAAGCATCATGTAATCTGTGTAATAAGACTCTCAAATTCTGCGGGAACACGACAAATCTTCGTGAACACCTGAAACGCATTCATTTACTTGAAGATGAGAGGCCTTCCACAAGCAAAAATACCGACCAACCTGAAACGACGACGAAAGACGAAGTCGAGCCTAGGACCAAAAATGTCAAGATGGTAGAATTAGAAGTAAAAGCTGTATTAAAACTAATGAATGGAGTAGATGTCTCCAACATTCAAGAAACACCAATACCAGAAGAACCAGACGATACACAAGCGTCGAAAGAAGTTGTTGCTACTGCAGTAAAGAAACACAAAATGGAAATAGAATTAGACTTTGGGTTGCTGAAAAATGAGTATTTTAAGCCAAGAGAAAGACATGCAGTAAAAAGATACCAGGATCTCGAGGCTGAACCAAAAAGGAAATTGTCAAAAGATGCAAAACCATTTCCAATTGAAAATAGTAAAAATGACTTGTTGAACTGTGACATATGTGATTTACAGTTTTTGAAGCCTAAAGATCTCAAAATACACAGACAGCAAAAGCATTCCAAATGTTCTATGTTCACTTGTGCACTGTGCTCCTCGACGTTCAACTCTAACGACCAACTAAAAAAGCACAAAATCACTCACGAGGACAAAGACAAGAACTTCTTGTGTATGAAATGTAAAACGGCTTTCTCTGACCATTTGGAATATTTAAAGCACAAATTGACACATGAAAAAGGTCCGAGCTACTATTGCTTGGAGTGCGGTAAAGAATTTGACTACAAAAGAGGTTATCTCACACATATACTAATACATTACGATAGATCAGTCGAATGTGACATTTGTCACCGTGAATACAATGTCAATAGAATAAAAGAACACAAAAAAGTTCATGATAAGATTGCATGTGTCGAGTGTGGCAAGGAGTACGACAAGAAATCCATTATATACCACATGATATCCCACACTGGAGTCAAACCGTACCAATGTATTTACTGCGGGAAGGGTTTCAGCAACAGGGCACAACGGGACGTGCATACAAGGATACACACTAAAGAAAGACCGTACGGTTGTAAAAAATGTCATCGTACGTTCTGTCAAACTATAGACTTGCAACGCCATATGGAGTTGCATACATCAAATGACAAACCGCTGAAGTGTGAGGTCTGCCTGAAGTTGTTCAAACACAAACAGTCTTTGCAATATCATATGGACATACACAATAATACACACAAGTATGAATGCAACATCTGCGGCTACAAAGTCAACACAAACACTGGTTTGAGAAGTCATTACATGAGACAGCATGCGGACGGAAGGAAATATGAGTGCGCACCGTGCGGGGTCGCTTTCAAAACTCCTTCCGATTTACTGAAACACAAAAAAAAGAAGAAACATTTGAACAATGCGTATGGGTTTAAGAAAAAAAATGAAGGATGA
- Protein Sequence
- MKRRESSSYVWAHFTKSNQEASCNLCNKTLKFCGNTTNLREHLKRIHLLEDERPSTSKNTDQPETTTKDEVEPRTKNVKMVELEVKAVLKLMNGVDVSNIQETPIPEEPDDTQASKEVVATAVKKHKMEIELDFGLLKNEYFKPRERHAVKRYQDLEAEPKRKLSKDAKPFPIENSKNDLLNCDICDLQFLKPKDLKIHRQQKHSKCSMFTCALCSSTFNSNDQLKKHKITHEDKDKNFLCMKCKTAFSDHLEYLKHKLTHEKGPSYYCLECGKEFDYKRGYLTHILIHYDRSVECDICHREYNVNRIKEHKKVHDKIACVECGKEYDKKSIIYHMISHTGVKPYQCIYCGKGFSNRAQRDVHTRIHTKERPYGCKKCHRTFCQTIDLQRHMELHTSNDKPLKCEVCLKLFKHKQSLQYHMDIHNNTHKYECNICGYKVNTNTGLRSHYMRQHADGRKYECAPCGVAFKTPSDLLKHKKKKKHLNNAYGFKKKNEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00206422;
- 90% Identity
- iTF_00206422;
- 80% Identity
- iTF_00206422;