Bbet020032.1
Basic Information
- Insect
- Biston betularia
- Gene Symbol
- -
- Assembly
- GCA_905404145.1
- Location
- FR989892.1:3211141-3211776[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-09 4.9e-06 26.8 0.0 1 40 12 51 12 56 0.86 2 2 9.2 5.9e+03 -2.3 0.0 31 45 127 141 126 141 0.83
Sequence Information
- Coding Sequence
- ATGCCTGGGAAAAAGGGCGCATTCCTAAATTATACTGAAGCTGCAATGCTTGCAGCAGTGAACGATGTTCGTCTTCATAAAACACCAATACGAACGGCTGCAAAAAAGTTCGGTGTACCAAGAATAACGCTTACAAATAAAGTAAAAGGGAAGTCACCGATGGAACGAAAAATGGGTCCGACATCCATCCTTACACCAGAAGAGGAGCATAAAATATGCGACTGGGTGCAAAAAATGGCAAAAGCGGGTTTTCCTGTGACAACCGAACAGTTAATTGTGAGTGTAGAGAAATACTTAAAGGAAATAAAACGTCCATGTGTCTTATTCAAGCATGGAAGACCAGGTAGAACATGGGTAAAGGCATTTATTCGGAGAAATCCAACGATTTCCATGAGGATATCACAAAATTTGACAGCATCGAGAGCCAGGGTAACAGGTGCTCACCTATCAGAATGGTACAAACGTGTGTATAAGGAGTTGGAAGATAGTGGCCATGCTGATATATTGAATGATGCATCGCGCATTTTTAATTGCGATGAGACAGCATTTTTTTTGGCACCAAAAGGACCTAAAGTGCTTGCTAGGAAAGGTGAAAAAAATGTTTACCAGCAGGTAAATGCTGATGACAAGGAATGA
- Protein Sequence
- MPGKKGAFLNYTEAAMLAAVNDVRLHKTPIRTAAKKFGVPRITLTNKVKGKSPMERKMGPTSILTPEEEHKICDWVQKMAKAGFPVTTEQLIVSVEKYLKEIKRPCVLFKHGRPGRTWVKAFIRRNPTISMRISQNLTASRARVTGAHLSEWYKRVYKELEDSGHADILNDASRIFNCDETAFFLAPKGPKVLARKGEKNVYQQVNADDKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357410;
- 90% Identity
- iTF_00357398;
- 80% Identity
- -