Basic Information

Gene Symbol
-
Assembly
GCA_905404145.1
Location
FR989862.1:5140764-5160309[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.44 1.5e+03 0.2 0.0 50 86 153 193 147 194 0.69
2 3 1.4 4.7e+03 -1.3 0.0 4 30 364 390 361 393 0.72
3 3 1.6e-16 5.5e-13 49.7 0.0 19 88 898 965 884 966 0.87

Sequence Information

Coding Sequence
ATGCCTTATAAGAGTGAGGTAGACGCTCCAGAACTTTATCAGACTATATCCAACCAACCAATGGTGATGAGAGTACGTAAGCCAGTAAATGAAGTATTGGACAATGTGTCATTCCAAAATATACACGAGCACAAAGAGAGAGGCAATAATTTAAAACCTCGAGTACTCCTCGAGCGGATTCCACCAGAAGAATTACAGAACATTGCAGAATATGCAGTTCTCTTAGAGCAACCATCTGTCTCAACCCAACCTGCTTCAGAACCTCGACTTGAACCTGTTCCAGAGCCCCCAAAGGCAAAACAGAAAAAAACAGGCAGAAAAACAATAACTTGTTCAAAAAAACAAGTCAAGAAAAAGAAAACAAGCCAAGTTACTAAACCACAACGTCGGCGATCTAAACGAAATAAAGAGGATCATAACAAAAGTCCAGCTGACTGTACAACAAGTATGGAGACTTCTACACAAAAAAAGACTGATGAAATAGCTAACAGATTGGCATATGATTTTACACAACTCACCAGTGTCAATATCTCAAACAGTAGTGTAAAAGGAGAATCATGCTATACTCGAATCCTTTATGAAAACTCTGATGATACTTTTCAAGCAGAGATGAACCCTGCTGAACATGAAGAATTTGGTACTTGTCATCAAACAGAGACAAACTCATTAGCTGGACAAGTAACCGAAATGGATAATTCTTTGGAACGGGTCCGGCAGTGGCTGGTGAAAAATGGTTTTGAAGAAACAGACCAAGAACAGAATGACTCGCAATTTAAAGTACCAACTACACCAGCACGGCGACTGCGTGTATCGGCATCTGTGTGTTCATCTAGATCAGTCCTGGCCCCAATGACTCCTAAAGAAACTGTAATGAGATCCAACTGCATTGCTTGGGATTATGAATTGCTAAGTAATATTGTTCAGGATAAAAGCTTAATAAAGAAATTTTGCGGCGAGTGCACACGGTGCCGTGTCATGTTTAAACTCGAGCACCTGCAGAACACTGAGTTTGAAATCACAGTGATAAATGATGATGTCTCATTAGTAACACAAAATATGAAAATATTCTCGGATATTTCAAAAGAATCCGATCACGTCAAAAAACTCAAAGAATTAATGACAGAGAAAGGGAATAAAATTTTTAATACCGCTGTTATAATCAAGAACAAAATAAACGCGAATGAGTCTTTATTGCACAAAGAGCATGCAGTTTTAGCTCAAGTTATTGGTATTCTACATGAATGCAATGCAGCTCGAATTAATGAGGCTCCACCTCAGAACCTAGAAGAATCAATAGATTCAGGAATGTTGCCTGAACTATTAAACTGCCAGCATGTTGAAAGTTTTGATATCGTAGATATGGTTTCGGTGCCGAATACCATATGCGTACAGCCAAATGACACCCAAGAACTCAACCACTTAGCTGAGCTGCCATCCCCAGACTCCAGACAGATTCCACCTCAAAGATCCATCAAGTCTCCTTCACCTATCCCCTCCAATCAGTCTTCTTACTCTCATCATTCTTTATTGCGGGGCTTCCCTTCATCTCCACTTACGGTGTCTGCTCCAAATTCATCCCAGGTTTCCGCTCGACCTTTGCTCATAGGCCCTAATCCTTTTTCTATGGCCTTTGCAAGGCCTCCACCCCAGCCCACACTTTTATTACAGAGCCCCACTCCGCTTTTATCTGGTGCCTCTACTCTACCTCCACCCCGAACAACCCTTCAGCCCTGGGCGTCTACTCTACCTCCACCCCAGAGCACCATTCAGCCTCAATCTGGGGCCTCTGCTCTACCTCCACCCCAGAGCGCTATTCAGTTTTTAATTGGGGCCTCTGCCCAACCTCCACCCCAGAAGACCAGTCAAGCTTTTTCCGAGGCCTCTGCTCTACCACCACCTCTGAGCACTATTCAGGCTTTTCCTGGGGCCGTTGCTTTATCTCCACCCCAGAGGACCAGTCAGGCTTTTTCCGGGGACTCTGCTCTACCTGCTCCTCAGAGCACCATTCAGCATTTACTTGAGGCCTCTGATCTACCTGCATTCCAGCGCTTTATTCAGGCTTATTCCGAGGCCTCTGCTGTACCTCCTCCCCAAAGAGCCACTCGGCATATACCTGGGATCTCTGATATACCTCCACCTCAGAGCTTTGTTCAGGCTTCTTCCGAGGCCACTGATCTGTTTCCACCCCAGAGCACTACTCAGCCTTTACCTGGGATCACTGCTGTACCTCCATCCCAGACCACACCTGAGGATTTTTCCAGGACCTCTGCTTCATATCCACCCCAGACCATCATTGATGCTGTTCCCAGGACCTTTACTCTATTTTCATCCCAGTGCGCCATTCAGCCTTTTCCCACGGCCTTCGCACGGCCTATATACGGAGGACCTATATCACAAACTCCACTTACGGACCTTACTCAGCAAGAGACAGTTTTGCAAGAAATAACAAAGACATGTCCATCCATAGATGAATTCAAAGAATGCCCTATAAAGTTCGCATATAAAATGCAAAAGTCAAATCCTTTAAACGGTATCTGTGCTATTAAACCACCAAACGATTTCAAGCCATTATACAAAACTGGAGACAATCAGATTAATTTTAAAGTTTCGAATCAGTATATACACCGAATGCTTACTCGCTGGGGAAAGGCAACCAGACAGTTAACGGCTATAAGATACATCCAGGACCCTAAGATCCAACGCTCACCACTGTTCGAAGGCCTGGAGATTGATCTTGTTAAACTGTTTAACACTGTACAAAGTGAGGGCGGCCTCGAGGCCTGCCAAAATGATAAAGAAAAATGGGAAGTTGTGGCGCGAAAAATGAAACTGTTTTGCCGTGGAAAGGCAAACACAAAGCTGGAAAACATTTATCTCAAATATTTGCTTAGCTATAACACACTAACGAATGAGGAACGCGAAAAGGCTAACTCGGAAGTGGAGAAATGTTGGACAGTACGAGAAGTACATTCCGTAGAGCGGGCGCAAAACCCGATGTGGCGACAAGAACGAATGCGAAATGGTGTACAAGATGAAGTATTCGCATCTCACTTGGAAAAAGTATGTGCAGAGGCCGAAGAGTGTGTCACCCCTGGAAGAACAATGAATTACAACAACTTTGAAAAGCTAGCACAACAAGTGCAGAAGACATATTTCCCCAAAAATGATAACCCGGCCCTGGAGGACGTAGAGGGTCGGTTTTGGAGCATAGTGACGTTAGGAGACGCGCATGTGTGCGTGCATTCTGCATCTGTTGACGCCTCGGGACACGGTTGCGGATTCACCGACACTAGCACTGAACTTTACGGATTGCACCCATGGAATTTAAAGCGGCTGCGTTGGTCCTCGGATAACCTACTCAGTCACCTCGGTCCCGCAATAGGCGTGTCGTCGACGTCCATCCACTACGGCATGATGTTTACCACCAGATGCTGGCACATGGACCCCACTTCTGTGCCCTGGATAGAGTACCATCACTCCGGACCTCCCAAGATCTGGTACTCAATATCGGCGGATCAAGAACATTTGTTCCGCTCGGCCGCCGAAGCGTTGTGTCCGTACGCGGTTCAGAACAAGTCCATCTGGCTACCGAGCGACATTATGATGATCCCGCCGAAGCTTCTTCTGCAGTACAAAATCACGGTGAAAAGATGCGTGCAAAACGCTGGGGAATTCGTCATAATCTACCCGAACACATATTGCGCCTGTATCGACACCGGACTTACCGTCTCGGAGGGCGTTTACTTCGCTCACCATAACTGGTTCATGGAGGTCGAGAATGTGTTCTCGAATCTTCGCAACAATTGCGAGCCGAGCCTGTTCTCGTTAGAGAAGTTGATGATCGCAATGACTCGCAACGAAGACACGCCGATTTACCTTCTGCAGCGTGTCCACACAATGCTGACTACCATGCTGTACGCGGAGCTTACATACCGACGAGCTTTGCACGAGAGGAACATCCAACTCATTACGCCAGAAGTGTTCCTGGAGCAAAACCAGCGAGCGTCCAACTCATCCTGGCAAATAGAAAACAACGGAGAGTGCGCATTCTGCAGGTGCCATCTGCATTTTTCGAGGGTGGTGGGAATAACCGCGGGACAGAGTGGATTGTGCTCAATGCACGGGATCTACTTGTTCGACAACATGACGCGCCATCAACAATTCAGCCGCCGCTGCAGTATCTTCTGTATTGTTCTAATAAGCGACGATGAGTTGAATAGCATTATAAGGGAGATCAAGGATCGCATGTTGTCCTCGATACAATGTGAAATATAG
Protein Sequence
MPYKSEVDAPELYQTISNQPMVMRVRKPVNEVLDNVSFQNIHEHKERGNNLKPRVLLERIPPEELQNIAEYAVLLEQPSVSTQPASEPRLEPVPEPPKAKQKKTGRKTITCSKKQVKKKKTSQVTKPQRRRSKRNKEDHNKSPADCTTSMETSTQKKTDEIANRLAYDFTQLTSVNISNSSVKGESCYTRILYENSDDTFQAEMNPAEHEEFGTCHQTETNSLAGQVTEMDNSLERVRQWLVKNGFEETDQEQNDSQFKVPTTPARRLRVSASVCSSRSVLAPMTPKETVMRSNCIAWDYELLSNIVQDKSLIKKFCGECTRCRVMFKLEHLQNTEFEITVINDDVSLVTQNMKIFSDISKESDHVKKLKELMTEKGNKIFNTAVIIKNKINANESLLHKEHAVLAQVIGILHECNAARINEAPPQNLEESIDSGMLPELLNCQHVESFDIVDMVSVPNTICVQPNDTQELNHLAELPSPDSRQIPPQRSIKSPSPIPSNQSSYSHHSLLRGFPSSPLTVSAPNSSQVSARPLLIGPNPFSMAFARPPPQPTLLLQSPTPLLSGASTLPPPRTTLQPWASTLPPPQSTIQPQSGASALPPPQSAIQFLIGASAQPPPQKTSQAFSEASALPPPLSTIQAFPGAVALSPPQRTSQAFSGDSALPAPQSTIQHLLEASDLPAFQRFIQAYSEASAVPPPQRATRHIPGISDIPPPQSFVQASSEATDLFPPQSTTQPLPGITAVPPSQTTPEDFSRTSASYPPQTIIDAVPRTFTLFSSQCAIQPFPTAFARPIYGGPISQTPLTDLTQQETVLQEITKTCPSIDEFKECPIKFAYKMQKSNPLNGICAIKPPNDFKPLYKTGDNQINFKVSNQYIHRMLTRWGKATRQLTAIRYIQDPKIQRSPLFEGLEIDLVKLFNTVQSEGGLEACQNDKEKWEVVARKMKLFCRGKANTKLENIYLKYLLSYNTLTNEEREKANSEVEKCWTVREVHSVERAQNPMWRQERMRNGVQDEVFASHLEKVCAEAEECVTPGRTMNYNNFEKLAQQVQKTYFPKNDNPALEDVEGRFWSIVTLGDAHVCVHSASVDASGHGCGFTDTSTELYGLHPWNLKRLRWSSDNLLSHLGPAIGVSSTSIHYGMMFTTRCWHMDPTSVPWIEYHHSGPPKIWYSISADQEHLFRSAAEALCPYAVQNKSIWLPSDIMMIPPKLLLQYKITVKRCVQNAGEFVIIYPNTYCACIDTGLTVSEGVYFAHHNWFMEVENVFSNLRNNCEPSLFSLEKLMIAMTRNEDTPIYLLQRVHTMLTTMLYAELTYRRALHERNIQLITPEVFLEQNQRASNSSWQIENNGECAFCRCHLHFSRVVGITAGQSGLCSMHGIYLFDNMTRHQQFSRRCSIFCIVLISDDELNSIIREIKDRMLSSIQCEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-