Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359231.1:3733409-3742793[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.2 1.7e+02 3.1 0.7 2 23 269 290 268 290 0.92

2 9 0.0001 0.0055 17.3 5.8 1 23 401 423 401 423 0.98

3 9 0.069 3.8 8.3 9.3 1 23 429 451 429 451 0.97

4 9 0.00021 0.011 16.3 3.0 1 23 457 479 457 479 0.99

5 9 2.7e-05 0.0015 19.1 1.3 1 23 485 507 485 507 0.98

6 9 0.0002 0.011 16.3 1.1 1 23 513 536 513 536 0.96

7 9 0.00097 0.053 14.2 5.4 1 23 542 564 542 564 0.98

8 9 1.3e-05 0.0007 20.1 1.4 1 23 570 592 570 592 0.98

9 9 4e-05 0.0021 18.6 0.8 1 23 598 620 598 620 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.2	1.7e+02	3.1	0.7	2	23	269	290	268	290	0.92
2	9	0.0001	0.0055	17.3	5.8	1	23	401	423	401	423	0.98
3	9	0.069	3.8	8.3	9.3	1	23	429	451	429	451	0.97
4	9	0.00021	0.011	16.3	3.0	1	23	457	479	457	479	0.99
5	9	2.7e-05	0.0015	19.1	1.3	1	23	485	507	485	507	0.98
6	9	0.0002	0.011	16.3	1.1	1	23	513	536	513	536	0.96
7	9	0.00097	0.053	14.2	5.4	1	23	542	564	542	564	0.98
8	9	1.3e-05	0.0007	20.1	1.4	1	23	570	592	570	592	0.98
9	9	4e-05	0.0021	18.6	0.8	1	23	598	620	598	620	0.98

Sequence Information

Coding Sequence: ATGCAGTGTTGTGTGCCTTTCTGCGAGAATACTTCCGACACTGTTTCACCATCTGATGGAAAAGGAATTACTTTCCACGAGTTTCCCCGTGAAGCATGTCTCCGAGCTGCTTGGCTCAGAGCCCTCGGCATGCAAGACTCTCACCACCCAGACCCAGCTGTGGTCTGCTCACTGCATTTTTTAGATGACGACTTCCATGATACAGAAGATTGTGTAAGGCAGATCCGTTCTGATGCTATTCCTTCAGCTGTGCAActgtgcgtgatatGCCTTGACACTGACAGCAAGCTGGTTCCAATGAGTAGACACAAGTTGGAGGAGACATATCCACTGTTAACCGGACTGCCTTCTTTTAACACAGACACTCTGCGACAAACAGTGTGTGTGCTGTGTGCTCAGAGACTAACTAACTTCAGCAGATTGAGAGACTTGAGCTTGAGAGCACATTCACTGCTGATGGACTTGCTACAGAAACATCAACTGATTACAATACAACATATAAAAATGTTCAGCCATACAATAAATCGACTAAAAAGTGATTTGGTGTCGACAACACGAGAATCTGATCATTGTGATTTGTACATATATCACTCTGATGAAAACCAAAAACCAGAACTAGAGGACATCAATGTTGCTACAGTTATAAATGAAGTTTCTTGGGACCCCATAGATGTAAAAGTCAAAATTGAGAACTACAACCAAATAGATGATTTAAATGATGAAAATTTTCCATCTAGTGAAGATTATTTGGATTCATATTCAGAAATGAAGACACAGAATGTAAAATGTGAGAATGCGGTATTAAAATGCAAACATTGTATGGAGGAGTTTGTAGAAGAGAATGCATATTACGAACATTTGAGCTTGCATATGCAGAATACAGGCAACAGTGGATTTGAATCATCACAAGTGTGCGAGCCTCGTGTATCTGTGAGCTGGGAATCTATGGACCTGAGAAACGAGGAAGGAACGCAGAGGATGAATGCTGACCCTCTCGCGATCCCAGATTCGCCGCACACATCACTAGCTCCACTGTCAAAAGTGCAGGCAGCTGAAGGATCAGCTGCGATATTGAAGAGTAAACAAACACACGAAGTTCAGATTTCAGATATATGTATAAATAAACCCACAAATAATATAGATAATATTCATGATAATAATAAGgactcacgctcagaatcccacactggtgagaagctacacacttgtgaaagatgcggtttcaaatgtgcacgaaaaagtagtttatacagacacatgagaatccacactggtgagaaaccacactgttgcgatatgtgcaattacaaaactgcacgcaagtgtcaactagccaagcacaagagaacccacactgatgataagccgtattcttgtaatatttgcaatttcagttgtgcgcgtaataatagtttcgttttgcatatgagaagtcacattggtgataagcctttctcttgcgaggtatgcgactacaagagtgagcataaaggtaacttagttaggcatatgaaaatccacactggtgaaaagccttatgcgtgtgaggaatgcgattatagaagtacacataaaagtagcttaattgcacacaatatgaccacccacactggtgaaaagccctattcgtgtgatgtttgtaatttcagttgtgctcacaaaactagttacaccgaacatatgagaagtcacactggtgaaaagccttattcttgtaccgtatgtaattatagaagtgcgtataaaagcaatttgaccagtcacatgaaaatccacactggcgaaaagctatattcttgttatctgtgtgattacaagggtatacgtagcagtgatttggcgaagcacatgagaaggcatactgctgaaacgtcagccgtgttcgtataa
Protein Sequence: MQCCVPFCENTSDTVSPSDGKGITFHEFPREACLRAAWLRALGMQDSHHPDPAVVCSLHFLDDDFHDTEDCVRQIRSDAIPSAVQLCVICLDTDSKLVPMSRHKLEETYPLLTGLPSFNTDTLRQTVCVLCAQRLTNFSRLRDLSLRAHSLLMDLLQKHQLITIQHIKMFSHTINRLKSDLVSTTRESDHCDLYIYHSDENQKPELEDINVATVINEVSWDPIDVKVKIENYNQIDDLNDENFPSSEDYLDSYSEMKTQNVKCENAVLKCKHCMEEFVEENAYYEHLSLHMQNTGNSGFESSQVCEPRVSVSWESMDLRNEEGTQRMNADPLAIPDSPHTSLAPLSKVQAAEGSAAILKSKQTHEVQISDICINKPTNNIDNIHDNNKDSRSESHTGEKLHTCERCGFKCARKSSLYRHMRIHTGEKPHCCDMCNYKTARKCQLAKHKRTHTDDKPYSCNICNFSCARNNSFVLHMRSHIGDKPFSCEVCDYKSEHKGNLVRHMKIHTGEKPYACEECDYRSTHKSSLIAHNMTTHTGEKPYSCDVCNFSCAHKTSYTEHMRSHTGEKPYSCTVCNYRSAYKSNLTSHMKIHTGEKLYSCYLCDYKGIRSSDLAKHMRRHTAETSAVFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205195;
90% Identity: iTF_00205195;
80% Identity: iTF_00205195;