Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359222.1:9914808-9916415[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00018 0.0096 16.5 1.5 1 23 248 270 248 270 0.99

2 9 0.18 10 7.0 5.5 1 23 276 298 276 298 0.94

3 9 0.03 1.6 9.5 0.1 2 21 305 324 304 325 0.93

4 9 4.4e-05 0.0024 18.4 6.8 1 23 344 366 344 366 0.98

5 9 3e-05 0.0016 18.9 2.1 1 23 373 395 373 395 0.96

6 9 1.1e-05 0.00061 20.3 0.8 1 23 401 423 401 423 0.98

7 9 1.9e-05 0.001 19.6 1.5 1 23 429 451 429 451 0.95

8 9 1.5e-05 0.0008 19.9 3.1 1 23 457 479 457 479 0.98

9 9 0.00061 0.033 14.8 3.5 1 23 485 508 485 508 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00018	0.0096	16.5	1.5	1	23	248	270	248	270	0.99
2	9	0.18	10	7.0	5.5	1	23	276	298	276	298	0.94
3	9	0.03	1.6	9.5	0.1	2	21	305	324	304	325	0.93
4	9	4.4e-05	0.0024	18.4	6.8	1	23	344	366	344	366	0.98
5	9	3e-05	0.0016	18.9	2.1	1	23	373	395	373	395	0.96
6	9	1.1e-05	0.00061	20.3	0.8	1	23	401	423	401	423	0.98
7	9	1.9e-05	0.001	19.6	1.5	1	23	429	451	429	451	0.95
8	9	1.5e-05	0.0008	19.9	3.1	1	23	457	479	457	479	0.98
9	9	0.00061	0.033	14.8	3.5	1	23	485	508	485	508	0.97

Sequence Information

Coding Sequence: ATGAATGATGTAACAAAACGTTACTGTAGACTATGCGCGGAACTAAGGCCTATAGTTCAAATGATGTCGCCCGATAAAGAAGTCGTGGACAGTTCAAAAATTATTACCAAATTATCCTGGATAAACATCGACATATCTACTAGAAATGGTCTCCCTAACACAATATGTTACGCCTGCTTGGAACTACTCGAACGTACGTGGAGTTTCCTTAACAACGTGAGAACTGCACAGGAGAAATTACAAGCAATATTTCTGAGCAAAACAAATGAAAACGTACTCGAAGTTGAAGTGGAAAAGAAGACTTACGAACAGGAACTGCCAGGCAAACCAGTCGACGAGAACTGGGAGATCTTCCAGGAGCTAAAACGTGAAATAAAAATCGAAAATTTAAACGAAAATGTACCAACATTATTTCCTAGTAACACAGTTGTGATTTCACACGAAAACCAAGTAAGTATTAAGCTAGAAACCGATAGTGACGGTAGGGACATAATTATCGATTCCAACGACGACTACGACCGTCTCAGCTCATCAGACAGTGATGTGCCACTCAAAAATTGCTTAAAACAGAAGAAAAGTCGGAAACACAAAAAATCTAAAAATCAGTCAGATTCACAACCAATACCTGTAAACGTGTCATGGGACGACCAGCCATGTATATGCGCGAAATGTGATATTCGTTGCCAGAATGTAACAATACTACAGTTACATTCACTCCAAATACATGATAGTTGCTGTGTGTACAAGTGTACTCAATGTTCCAAAGTTCTTCCCGGTTTCCGATCCTTTATAAGACATATGAGAACACACAACAAAGAACTTCGACACTGCTGCGAGTTCTGTAACTGGACGTTTAGTTTATCAGATTTGTCATCTCACAAAATGAAATACCACAAATTGATTTACAACACCAAATGCTATCAGTGCGGTTCGAACTTTGATAGCCCCGAAGAATTGGAAGAACACAAAAATCTATTCAACAAGAGGGGTAATTTAAAGAAAGTGTTAAAAATGGATGAGCCAAAAGTTCACAAGTGCGATAAATGTGGCAAAGAGTTCAAGAGTCGGGCAAATCTGTGCCAACACAAATACACACACTTGGATAGAACGAAAGACTTTGCCTGTCATGTGTGCGGTAAAATGTTCTTCACAAAAGGTGCATTGTGCACTCATTTGGTTGTTCACGAAGATAAACGACCTTTCAAATGCAATCACTGCCCCTTAGCATTCCGCGCTAAAGGTAATTTAATATCACACATGAGCTTACATTCTGGTTTGAAACCGTTTATATGCGAACAGTGTGGGAAGAGTTTTAGAGTTAAAAGACACTTGATGTCCCATTCAATAGTCCACACCGACTTGAGACCGTATGTTTGTGAGTATTGTAACAAATCTTTCCGTTTTAAAACTCGTCTCAACTTACATTTAAGACAACACACGGGTGTGAGACCGTACCGATGCATTTACTGCCAGCGTGACTTTACAAACGGGTCCAACTACAAGAAACACATGAAGCGACGTCACGGTATTGACACATCTACACGGCTGTTGTCTAAACTCGCAAATAAAAAAGAATTAGATGCTGTTAGTGAGGCAGTCCCTCAGTGA
Protein Sequence: MNDVTKRYCRLCAELRPIVQMMSPDKEVVDSSKIITKLSWINIDISTRNGLPNTICYACLELLERTWSFLNNVRTAQEKLQAIFLSKTNENVLEVEVEKKTYEQELPGKPVDENWEIFQELKREIKIENLNENVPTLFPSNTVVISHENQVSIKLETDSDGRDIIIDSNDDYDRLSSSDSDVPLKNCLKQKKSRKHKKSKNQSDSQPIPVNVSWDDQPCICAKCDIRCQNVTILQLHSLQIHDSCCVYKCTQCSKVLPGFRSFIRHMRTHNKELRHCCEFCNWTFSLSDLSSHKMKYHKLIYNTKCYQCGSNFDSPEELEEHKNLFNKRGNLKKVLKMDEPKVHKCDKCGKEFKSRANLCQHKYTHLDRTKDFACHVCGKMFFTKGALCTHLVVHEDKRPFKCNHCPLAFRAKGNLISHMSLHSGLKPFICEQCGKSFRVKRHLMSHSIVHTDLRPYVCEYCNKSFRFKTRLNLHLRQHTGVRPYRCIYCQRDFTNGSNYKKHMKRRHGIDTSTRLLSKLANKKELDAVSEAVPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01021604;
90% Identity: -
80% Identity: -