Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359230.1:2657631-2665081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00032 0.018 15.7 0.1 1 23 232 255 232 255 0.95

2 10 2.6 1.4e+02 3.4 0.3 2 23 281 303 280 303 0.89

3 10 0.0042 0.23 12.2 1.2 1 23 326 348 326 348 0.97

4 10 2.1e-05 0.0012 19.4 0.9 1 23 352 374 352 374 0.98

5 10 0.07 3.8 8.3 5.7 1 23 379 402 379 402 0.96

6 10 0.0049 0.27 12.0 0.4 3 23 411 432 409 432 0.94

7 10 7e-05 0.0038 17.8 1.1 1 23 438 461 438 461 0.98

8 10 0.00026 0.014 16.0 4.5 2 23 468 489 467 489 0.96

9 10 4.6e-06 0.00025 21.5 5.2 1 23 495 517 495 517 0.98

10 10 1.5e-05 0.00081 19.9 4.5 1 23 523 545 523 546 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00032	0.018	15.7	0.1	1	23	232	255	232	255	0.95
2	10	2.6	1.4e+02	3.4	0.3	2	23	281	303	280	303	0.89
3	10	0.0042	0.23	12.2	1.2	1	23	326	348	326	348	0.97
4	10	2.1e-05	0.0012	19.4	0.9	1	23	352	374	352	374	0.98
5	10	0.07	3.8	8.3	5.7	1	23	379	402	379	402	0.96
6	10	0.0049	0.27	12.0	0.4	3	23	411	432	409	432	0.94
7	10	7e-05	0.0038	17.8	1.1	1	23	438	461	438	461	0.98
8	10	0.00026	0.014	16.0	4.5	2	23	468	489	467	489	0.96
9	10	4.6e-06	0.00025	21.5	5.2	1	23	495	517	495	517	0.98
10	10	1.5e-05	0.00081	19.9	4.5	1	23	523	545	523	546	0.96

Sequence Information

Coding Sequence: ATGGATCTAAATAAACTTTGTCGTTGTTGTTTAAATAAAGGAGCCACCAGAGATTTGAGTACAGCATACAGCTCGTGTGAAAAAATGGAAATATATTCGGAAATGCTGAGAGAATGCTACAACATTATTTTACGGCCAAGTATCCACAGCAACAGTATATGTGATGTCTGCGTGAAGAGTCTCCAGGAGTCATACCACTTCAAGCTGCAGGTCCTCAATGCGGAGCAGGCTTTCCTGAAGAGTCTCTCCTGTGATGAACATCCCGTCCTGTTGAAGATACTTACTGAAGAACAAGATGAGAAACCAACAGTGAAAGAGGAGCCAGCCCACAGTGTCTCCGACCACGAATCAGATTACTTAGTTGACACAATCAAAGAGGAATCGCCTTCCATAGACACAGAGAGTGGGGCAGAGACAGAGCAGCCTCGGAGGAAGACCAGAGCGAGGAATCAAAAATCATCTGAGGAGAGGAAAATTGCCAATTTTGTCACAAAACTTGCTATGAATTCTGGCATATTGCCGAATATCAAGAAACAACCGAAACAAAGAAAAATCAACGTCAACCTCAAAGACCCAATAGATATAGAGTGGAAAAGGAAATCTGTCATAGACAAGAGAAAGCACAGAGACAACTTGCTGACTATATTGAAATACTCAAATGTAATCCCTTTCAAGAATAAATCCCTCCGCGGCTTCATGTGTGGGTACTGTGATGCTACGTACCCAGATCCCAACGATCTGAGGTCTCACACCCAAAACGAGCATGAAAAAGAACGGTGCTCCTTCAAATCATCATTCGACATGACAGAGTACAAcgtcaaagttgacataaccaacctaacatgcacaatatgtttgacagaaatggacaacctatctaagctaaaggaccatcttgttaacaatcacaacaaaattgtgtacaaagacataaaagatcacataatgcagttcaaattgaagaaaggtgatgtttttgattgtgtgatgtgtccgtcgacttatgagacgttcaaaatgttgaagcagcacatgaataagcattattgcaactatacttgcaccaaatgtgagaactccttcgcaacgaaacgttctttgaacgctcaccaagcttcccatcaagacggtagcttcaaatgtgatctgtgtgagaaaatattctcgagtaaaacgaagaaacattaccacgagaaaacgaaacacatgggcacgaggaatataagcaactgtccgttctgtgatgttccgttccgttcgtactaccaacggaaccaacacatggtgaaggtccacaattcggaggcccaatacaaatgcaacgtatgcaataagggttacatactgaaatctttgctgatgtatcatataaagaagaaccatttgatggaacggaactgccaatgctctgaatgcggtcacaagttcttcagcaacaaggcgttgaaagctcacatggtgaagcacaccggtgaaaggaagtattgctgtgaagtgtgccacaagtcatatgcgaggaagtacacgttgagggagcatatgcggatacacaataacgatagacggttcaagtgtgaagtgtgtgggacgtcgtttgtccagaagtgcagtttgaaaagtcatttgttgtctcaccacggGATATGCATCGCTGCGAGCAATATCATGTCTAATTCTTGA
Protein Sequence: MDLNKLCRCCLNKGATRDLSTAYSSCEKMEIYSEMLRECYNIILRPSIHSNSICDVCVKSLQESYHFKLQVLNAEQAFLKSLSCDEHPVLLKILTEEQDEKPTVKEEPAHSVSDHESDYLVDTIKEESPSIDTESGAETEQPRRKTRARNQKSSEERKIANFVTKLAMNSGILPNIKKQPKQRKINVNLKDPIDIEWKRKSVIDKRKHRDNLLTILKYSNVIPFKNKSLRGFMCGYCDATYPDPNDLRSHTQNEHEKERCSFKSSFDMTEYNVKVDITNLTCTICLTEMDNLSKLKDHLVNNHNKIVYKDIKDHIMQFKLKKGDVFDCVMCPSTYETFKMLKQHMNKHYCNYTCTKCENSFATKRSLNAHQASHQDGSFKCDLCEKIFSSKTKKHYHEKTKHMGTRNISNCPFCDVPFRSYYQRNQHMVKVHNSEAQYKCNVCNKGYILKSLLMYHIKKNHLMERNCQCSECGHKFFSNKALKAHMVKHTGERKYCCEVCHKSYARKYTLREHMRIHNNDRRFKCEVCGTSFVQKCSLKSHLLSHHGICIAASNIMSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01151486;
90% Identity: -
80% Identity: -