Bany014703.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359231.1:3280933-3306213[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.11 5.8 7.7 0.0 2 23 254 275 253 275 0.96 2 13 1.4 73 4.3 0.2 1 19 307 325 307 330 0.87 3 13 2e-06 0.00011 22.7 0.8 2 23 334 356 333 356 0.96 4 13 0.099 5.4 7.9 5.3 2 23 360 382 359 382 0.95 5 13 0.0093 0.5 11.1 0.5 2 22 396 416 395 420 0.93 6 13 0.00068 0.037 14.7 0.2 2 23 434 456 433 456 0.95 7 13 0.0052 0.28 11.9 1.6 2 21 470 489 469 494 0.93 8 13 0.0001 0.0056 17.2 1.2 2 23 509 531 509 531 0.96 9 13 0.092 5 8.0 0.1 3 21 548 566 547 567 0.93 10 13 9.1e-06 0.00049 20.6 0.2 2 23 580 602 579 602 0.94 11 13 0.15 8 7.3 3.5 1 23 608 631 608 631 0.92 12 13 0.00045 0.024 15.2 1.3 3 23 642 662 641 662 0.98 13 13 0.015 0.81 10.4 1.7 1 23 668 691 668 691 0.97
Sequence Information
- Coding Sequence
- ATGGATACAGTAAAAAATGAATTGGACAACCTCTGCAGAGGGTGTTTATGTGTTGATCGCTTACTTTTACCGTTAAATAAAAATGTCGACTTGTTCTTCATATTCCTGGGCAACGAGCTGTCAATATCTGAGGATTCCAAGTACTACAACATCCTGCTGTGCTGGGAATGCATCGCACTGCTGAAGAAGGCGGAGGTCTTCCGGAAGAGGGTGCAAACTGCCCATCGATACTTTGAGAGAATATTGGGCAACCCCTCAACAACCCGCGCATTGTCAACCCTAAACATACACAACAAAGATGACTATGACCTCATATACACTGAAAATGAAAACCCTGAACCCGTAATCAAGCCTGAGGCTCTGAAATTTGAAGTCACCTTCCCGGAGAATGAGGGTAACTGTCATATCAAGGAAGAAGCATATTATGATGATAATGATGATAACTTTGATTATGAGGCAGAGGAACCGAAACCCAATGTGTCCGCTTTTGTGAAGAAGGAAAAGAAGAAGAAGACAAAATATAAGAAGATCACACCTATAAGCAAAAAAATAAAAACCAGACCAATAAAGTACACACCGGAAGAGATAGACAGATGTATAGAGGAAGTGGTCTACACCCTGAAGGACATACTGGCTATGAGGCATGAGAAGAAACCGAACCGCATCAAGAATATGGAGTCGAGGTGCAATGTGTACATCATGAAACTGCTCGACACACAGAAGAAGGATCTAAGGCAGAAAGTGAAGAACGATGGTCTGACGTGCTCGGAGTGCGAGACAGTGGTGCCAGACCAGCTGGCGCTGGCGGCTCACTGGGAGAGCCACCCGGTCGCTCTGCTGCGCTGCCGGTTCTGCGAGCTGCTGAGCAAGTCTCGCAAGAGCCTCTGCTACCACGTGGAGTCGCGTCACTCCATCATATACAGCTGTACGCTCTGCCCTATTGACTTTAGAGCGCTGCCGGAGTACTATCGCCACGATCGGGAGCTTCACAGAATATTGATATGCGACTACTGTGGGAAAAAGTTCAACCAGAAGTCTGGCATCGAGCGACATATCAGACGTAAACACCTACCACTGAAATGCGGTGTTTGTCACCGTCACTACAAGAAGATGGCTTTCCTAAACAACCACATGGCGGTCTGTCACCCCGAAGTCAAGTGGCGGACTGTCAAACGCGAGCTCACTTACTGCGTAGAGTGCGACATGCACTTCGGTACCGAGTTCTTATACAAGCGCCATCTTAGGACCGCCATAGCTCACCGTCCCAAAGTGAAAATATCACGATACCACTTACCGATTCAATGCGAGATATGTAAAAATGTGTACAAGAGAGAGAGCACGCTGGACAATCACATGGCCGTACGTCATCCCGAGGTCAAATGGAAAACGGTCAAGCGCGAACTGACTTACTGCGTGGAGTGTGACATACATTTCGCCACGGAGGATTTGTTCAAACGTCATCTGAGACACTACGTCAGACATAGAATCAATCCGCGCAAAGAGCAACACAACCACTTACCCGCCGTGTGCAATATATGTAACTTTGAGTTCAAAAGAAAGAACTACCTCAGGGAGCACTATAGACTCCTGCACCCCGAGCTCGTAGAGTCAAAGAGGGATATAGTCCGAGAGCTGGCGTACTGCGTTGAGTGCGACCTGCAGTTCGCCAGCGAGTACTTTTACAGGCGGCACCTGCTGTACGCGGTAGCGCACAAACGCAGAATAAGACCTAAGGTACCCTGTCCCGACTGTGGTAAGATATTTAGCAGGAAGAGTTACATGGATAACCATTATAAACTGGTACACGTTAGAAAGAGCCAGCACTATTGCGAACTATGTGATAAGCACTTCATCAACGGCTACGCTATACGGACCCACAAGAAGTTTGTCCACGAGAAATATGAGAAGCCGAAGAACAAGATATGCGACATATGCGGTCGAGGATTTCATACGAACCGCGTGCTGATAAACCACAAGCGCACGCACACCGGCGAGCGGCCGCACAAGTGCTCGTACTGCTCGGCGGCCTTCGCGCAGAACGTGGCGCGCAAGACGCACGAGAAGACGCAGCACAAGCACCTGCTGCAGGAGCTCAAGGGCTTCTCCACTTGA
- Protein Sequence
- MDTVKNELDNLCRGCLCVDRLLLPLNKNVDLFFIFLGNELSISEDSKYYNILLCWECIALLKKAEVFRKRVQTAHRYFERILGNPSTTRALSTLNIHNKDDYDLIYTENENPEPVIKPEALKFEVTFPENEGNCHIKEEAYYDDNDDNFDYEAEEPKPNVSAFVKKEKKKKTKYKKITPISKKIKTRPIKYTPEEIDRCIEEVVYTLKDILAMRHEKKPNRIKNMESRCNVYIMKLLDTQKKDLRQKVKNDGLTCSECETVVPDQLALAAHWESHPVALLRCRFCELLSKSRKSLCYHVESRHSIIYSCTLCPIDFRALPEYYRHDRELHRILICDYCGKKFNQKSGIERHIRRKHLPLKCGVCHRHYKKMAFLNNHMAVCHPEVKWRTVKRELTYCVECDMHFGTEFLYKRHLRTAIAHRPKVKISRYHLPIQCEICKNVYKRESTLDNHMAVRHPEVKWKTVKRELTYCVECDIHFATEDLFKRHLRHYVRHRINPRKEQHNHLPAVCNICNFEFKRKNYLREHYRLLHPELVESKRDIVRELAYCVECDLQFASEYFYRRHLLYAVAHKRRIRPKVPCPDCGKIFSRKSYMDNHYKLVHVRKSQHYCELCDKHFINGYAIRTHKKFVHEKYEKPKNKICDICGRGFHTNRVLINHKRTHTGERPHKCSYCSAAFAQNVARKTHEKTQHKHLLQELKGFST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -