Bany014725.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359231.1:3621372-3647892[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.032 1.7 9.4 0.2 1 23 354 376 354 376 0.98 2 21 0.55 30 5.5 2.9 1 23 380 403 380 403 0.97 3 21 0.48 26 5.7 0.2 1 12 410 421 410 424 0.85 4 21 0.3 16 6.3 0.3 1 12 451 462 451 465 0.85 5 21 0.3 16 6.3 0.3 1 12 492 503 492 506 0.85 6 21 0.3 16 6.3 0.3 1 12 533 544 533 547 0.85 7 21 0.3 16 6.3 0.3 1 12 574 585 574 588 0.85 8 21 0.3 16 6.3 0.3 1 12 661 672 661 675 0.85 9 21 0.3 16 6.3 0.3 1 12 702 713 702 716 0.85 10 21 0.3 16 6.3 0.3 1 12 743 754 743 757 0.85 11 21 0.3 16 6.3 0.3 1 12 784 795 784 798 0.85 12 21 0.3 16 6.3 0.3 1 12 825 836 825 839 0.85 13 21 0.94 51 4.8 1.8 1 12 866 877 866 887 0.88 14 21 2.2e-05 0.0012 19.3 0.5 2 23 893 915 892 915 0.93 15 21 0.00011 0.006 17.2 1.2 1 23 921 943 921 943 0.97 16 21 0.00047 0.025 15.2 0.6 1 23 947 969 947 969 0.97 17 21 0.037 2 9.2 1.5 3 21 1085 1103 1084 1108 0.93 18 21 0.00083 0.045 14.4 1.4 1 23 1116 1139 1116 1139 0.94 19 21 8.2e-05 0.0044 17.6 2.4 1 23 1144 1167 1144 1167 0.98 20 21 7.3e-06 0.0004 20.9 2.4 3 23 1176 1196 1175 1196 0.98 21 21 6.5e-06 0.00036 21.0 2.4 1 23 1202 1225 1202 1225 0.96
Sequence Information
- Coding Sequence
- ATGGTAAATAAGGAAGGCATAATGAATAATCTCCTTTGCACAGCCTGTTTGTGTATAGGCAGGACTATTAAAGAAATCTATGAGGAAGAGCATAAGAAGTTCTATTTTGAAGTCTTGAAAGAACTCCCTATAAACAACTCGGATATAGTGCCCAGGGTATGCTGGGAGTGTAAAGCCATGCTGGAGAAAGTGCTATCTTTCCGAGAGCAAGTTAAAGACTGCTACAGGATACTGAGGACTTATATAGATAGTGTACACGACAGCTCCCTACTGGATATATCCAGAGCGCCGCGGTTGAAGGTCCACTCCAATGATGCTGTGATCATCACACCTCGTGATAGTCTCCTTGTCAAGCTTGAGGATAATGACAAGTGTAAGGAGCTGTCAAAAAGTGACACTGCTGACAACGGCCCCACCGAGGACATACAGACGGTGCTCTGTGACGTCAAAAAGAGAGAAGGAGAAAAAAGTAAAGTGAAATCTAAACGCACATTGAAAACGAACGTCGATCCCGTCGCTGTCAATGAGGCATGTCAAACTGACGTCAAAGTTGACACCAGTGTCAAAACCAGTGACGTCAAACTGGAGGACCTTAACAATGGCAATGTAAATGAGGACTGTCAAATGGACGTCAAAGTGGAGGTTGACACTCATGTCAAAATCGATGACGTCAAATCGGAGATCAATAACGATGTTGACGAGGATGCTATGTCAAATGAGGGTAGTCTGAAATCTTTCAACTCTGACTCTGATAGTGACGATGACTCGGATAGAGACATTGACGCGAAAATACAAAACTTTTTGGACGATATCAAAAAAAATAAACACAAATCCACAAAAATAAAAAAGAAACGGAAAACTGAGAAAAAGGTGTCAAAATACGACAACATACTAACAGTGGATCTCTCCTACGACGAGATGCAAACGGAGAGATCTCTCCGCGCTCTCTGTGAGAGTTTCACCCAGGCGCCACACAAGTGCTCGACTTGTTTGCTCGTCTTCAACTGCGCCTCTTCTCTCGACACTCACCATGAGAAGAAACACAAGGCACCTGGTGATTACATTTGCTCCATATGCCGAACCATAGTGTCTTCCGTCGAAGCCTTCACTGCACATTATAAAAGACACATGAAAAGGTATGAATGTGCGCTCTGTCACAAGCGAGCGACAGACATCAAGTCCATACAGCAGCATCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACACGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCATCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAAGTGAGTGCTTGCAGCAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAACAGAGTCAGCTCTCGCCCGCGCCGTAGGATACATAACATCGAGTCCATACAGCAGCACCTGCACACGCGGCACCAGATCACTCTCAGGAAGTACAAGTGCAAGTTGTGCGGCAAAGTGTCCAAGTCCGTAGACACGCACCGTTACCACTGCGACATGCACAAGTCGCGCGTGCAGTGTCCGCAGTGCGACAAGACCTTCAGCCACCGCGCGGGGCTCATGAACCACCGGCTCGCCGTCCACGAGGCGCAGAACCAGTTCCCTTGCACGCTCTGTGACAAAGTCTTCCGGTGGAAGACCAGCCTGAAGCGACATCTGGAGAAACACAAGAACGAGTTCCCTTGCTCGCTCTGTGATGAAGTGTTCCGGTGGAAGACCAGCCTGAAGCGACATCTGGAGAAACACAAGAACGAGTCTGAAACGACATCTGGAGAAACACAAGAACGAGGTGAGTCCACCAATCCTAGAACCATAGTATCAGTTCCCTTGCTCGCTCTGTCACAAAGTGTTCCAGTGAACAATCTGAAACGACATCTGGAGAAACACTACAGGACGAATGTTCCGGTGGAAGACCAGCCTGAAGCGACATCTGGAGAAACACAAGAACGAGGTAATTCCACCAGTCCTAGAACCATAGTATCAGTTCCCTTGCTCGCTCTGTCACAAAGTGTTCCGGTGAACAGCCTGAAACGACATCTGGAGAAACACAAGAATGAAGAGAGCAGCACAGTCCCCACTAACAAGGCGTACTGCGAATCGTGCGACATCGGCTTCTCGTCTGTCTGTTCGTTGCAGCGACATCTCAGAAACAGCCTCAAACATGTTACATACGACCAACTCAAATTCATATGCGACCACTGTGACCAGAGATATGTAGACAAGACCAAACTGCGCGATCATATAGAGGAGAAACATTTGTACAGAACCTTCCAGTGCCACATCTGTCACAAGCCGTCTAAGAACCGCGTCGGGCTGGAGCAGCACGTGCGCACCGTTCACACCGGGCGACCCAACAACCGGATATGCCACCATTGCGGGAAAGGATTTCCGACCAACCTGCAGCTAGAGTCTCACATCCGTACGCACACCGGCGAGAGGCCGTTCATGTGCGAGTACTGTCCCGCCACATTCTCGCAGCAGTCCAACCTCTACAAGCACCATAGACAAGTACATTTAAACATGAAATCTAAGCGATATCCGCTGTGTAAGAAGAGCAAAGCGGACGGGAATCAAACCGACGACCCTCAGCCGCCATTCCCTATAGCAATCATGCAGTACATACCAGAAAATGGATTTAGTTTTTAA
- Protein Sequence
- MVNKEGIMNNLLCTACLCIGRTIKEIYEEEHKKFYFEVLKELPINNSDIVPRVCWECKAMLEKVLSFREQVKDCYRILRTYIDSVHDSSLLDISRAPRLKVHSNDAVIITPRDSLLVKLEDNDKCKELSKSDTADNGPTEDIQTVLCDVKKREGEKSKVKSKRTLKTNVDPVAVNEACQTDVKVDTSVKTSDVKLEDLNNGNVNEDCQMDVKVEVDTHVKIDDVKSEINNDVDEDAMSNEGSLKSFNSDSDSDDDSDRDIDAKIQNFLDDIKKNKHKSTKIKKKRKTEKKVSKYDNILTVDLSYDEMQTERSLRALCESFTQAPHKCSTCLLVFNCASSLDTHHEKKHKAPGDYICSICRTIVSSVEAFTAHYKRHMKRYECALCHKRATDIKSIQQHLHTRHQITLRKYTCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIRVHTAAPAHAAPDHSQEVQVQVVRQSVQVSACSRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSNRVSSRPRRRIHNIESIQQHLHTRHQITLRKYKCKLCGKVSKSVDTHRYHCDMHKSRVQCPQCDKTFSHRAGLMNHRLAVHEAQNQFPCTLCDKVFRWKTSLKRHLEKHKNEFPCSLCDEVFRWKTSLKRHLEKHKNESETTSGETQERGESTNPRTIVSVPLLALSQSVPVNNLKRHLEKHYRTNVPVEDQPEATSGETQERGNSTSPRTIVSVPLLALSQSVPVNSLKRHLEKHKNEESSTVPTNKAYCESCDIGFSSVCSLQRHLRNSLKHVTYDQLKFICDHCDQRYVDKTKLRDHIEEKHLYRTFQCHICHKPSKNRVGLEQHVRTVHTGRPNNRICHHCGKGFPTNLQLESHIRTHTGERPFMCEYCPATFSQQSNLYKHHRQVHLNMKSKRYPLCKKSKADGNQTDDPQPPFPIAIMQYIPENGFSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -