Basic Information

Insect: Bicyclus anynana
Gene Symbol: prg
Assembly: GCA_947172395.1
Location: OX359208.1:12813234-12815046[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.4 76 4.2 4.4 1 20 176 195 176 199 0.84

2 10 0.0061 0.33 11.7 0.2 1 23 205 228 205 228 0.96

3 10 3.7e-06 0.0002 21.8 3.6 1 23 234 256 234 256 0.96

4 10 4.3e-07 2.3e-05 24.7 3.0 1 23 262 284 262 284 0.99

5 10 1.9e-05 0.0011 19.5 0.1 1 23 290 312 290 312 0.97

6 10 0.00099 0.054 14.2 0.5 1 23 318 340 318 340 0.95

7 10 0.00017 0.0094 16.5 0.6 2 23 437 459 436 459 0.95

8 10 1.6e-05 0.00085 19.8 2.6 1 23 465 487 465 487 0.97

9 10 2.1e-05 0.0011 19.4 2.1 1 23 493 515 493 515 0.98

10 10 0.0016 0.089 13.5 0.0 3 23 524 544 522 544 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.4	76	4.2	4.4	1	20	176	195	176	199	0.84
2	10	0.0061	0.33	11.7	0.2	1	23	205	228	205	228	0.96
3	10	3.7e-06	0.0002	21.8	3.6	1	23	234	256	234	256	0.96
4	10	4.3e-07	2.3e-05	24.7	3.0	1	23	262	284	262	284	0.99
5	10	1.9e-05	0.0011	19.5	0.1	1	23	290	312	290	312	0.97
6	10	0.00099	0.054	14.2	0.5	1	23	318	340	318	340	0.95
7	10	0.00017	0.0094	16.5	0.6	2	23	437	459	436	459	0.95
8	10	1.6e-05	0.00085	19.8	2.6	1	23	465	487	465	487	0.97
9	10	2.1e-05	0.0011	19.4	2.1	1	23	493	515	493	515	0.98
10	10	0.0016	0.089	13.5	0.0	3	23	524	544	522	544	0.92

Sequence Information

Coding Sequence: ATGGATGATTCGTTTATTATCGCGAATTTCCACGCGCTGTGCCGCCTCTGCCTCAATAAATGTAATCTTACAATGTCAATATTTAGTACTGCTGATGATGAAGCTAATATCTCTTTAACCTCGAAAATCGCTGAATGCTTCGAACTACAGATGGATCCCAATGATGGCCTCCCTGCCAGAATATGCTACAAATGTTTGTTTAAATTGAATAAATGTTCAAAATTCAGATCACAGTGTATTCAAAGTGAGGCCAGACTGAGACAAATAACAAACAGTGTCAATGAGTTGGACAACTCAAACTCATCTGAGCTGAGTTCTTTCAATTATAATAACTTGCAGGAAACCCAAAAACCAAAAGCTGAAGATTATATTGTTGAAGACAGTGTTGTGATGGTTGTGGATCCCAGCCTCGATTATGACTCTTCGGAAGATTCAGATAATGTTGATCAAGCTGAAGTAGAGACAGTGGAAAGAAACAACACACCAGATGGAGACACAAACTCTGAATCATTCTACAAAAATGTTTTTATGTGTAAGTTCTGCGATCAAGCCTTTATTTCACAGGACAAATGTAAGGAACATGAACATGGCTTCCACGACCCTAATCTTCCCTACAAATGCGTTGAATGCAGTCTGGTATTTGCTGAACGTACACAGTATGTAGCTCACACCAAACAAGTTCATGGAAGTGACAAACCTTACCATTGCCCCGAATGTGACAAATGCTTTGGTCGAAGGTCAGATTTACGTAAACATTCAATTGTACATACAGGTGTAAGACCTTTCCAATGTCAGTATTGCTTGAAGAGCTTCTCTCGTAATACAAATCTGAGCAAACATCTGAGAATCCACGCGGGACACAAACCACATGTTTGTCCACTGTGTCCACGCAGTTTTGTAGCCAAAGGTGACCTGCAACGTCATGTATTAGTTCATTCTGGAATGAAACCATATGCTTGTCGGAAGTGTCCACTGACATTTGGTCGAAGAGATAAGCTTATCAAACATGAAGTTAAACATGGCCCTATTAGTCCTGAACATAAAGCATATGAAAATGACCAAGAAACACATGACATGGTTGTCAATGTGAACCCATTCAATAACCTGATGACTTCACCTTCACAACTGAACTCTAGCAATGCAAATGCTAATGATTATGATCTACCTAGGGTACCAGATCACATTGCCGGTGAAGGTAGCTTTATAAGCCAAATGCAAAAAAATCCATCCACCTCAGGAAAAAGAATACACAATTCTCCATCCAAGCAAAAAGTTACAACACCAACAAAAAACAGACCCAAAAACATTAAATGTCATCAGTGCCCTAAAAGATTTGCTTCATTAGATGCTTATAAAACTCATGTGTCTATAGCTCACATTGGTTCTAGAGTTTTTCAATGTAAAATCTGTTTTAAAAAGTTTTCTAGGAAGAGAGAACTCGACCGTCATGTCACAATACACTCTGGTATGAAGCCGTTCAGCTGCAGCCAGTGCGATAAAAAGTTTGTTAGAAAGGACAAACTAGACAAACATGAACAGATGCACGAATGCTTGGTCGTGAACATGCCTTGTATTGAATGTGGCGCCACATTTGAGAAGAAAGCAGACTTAGTGGCTCACATAAAGTCACACTTCACTGATAATTTTGATGAAAAAATCTCCAACACTGAAATTAAGAAGGAGAACGAACCTGATTTCCCCATGGAAGACAATTTTTATGATGAAACCTGA
Protein Sequence: MDDSFIIANFHALCRLCLNKCNLTMSIFSTADDEANISLTSKIAECFELQMDPNDGLPARICYKCLFKLNKCSKFRSQCIQSEARLRQITNSVNELDNSNSSELSSFNYNNLQETQKPKAEDYIVEDSVVMVVDPSLDYDSSEDSDNVDQAEVETVERNNTPDGDTNSESFYKNVFMCKFCDQAFISQDKCKEHEHGFHDPNLPYKCVECSLVFAERTQYVAHTKQVHGSDKPYHCPECDKCFGRRSDLRKHSIVHTGVRPFQCQYCLKSFSRNTNLSKHLRIHAGHKPHVCPLCPRSFVAKGDLQRHVLVHSGMKPYACRKCPLTFGRRDKLIKHEVKHGPISPEHKAYENDQETHDMVVNVNPFNNLMTSPSQLNSSNANANDYDLPRVPDHIAGEGSFISQMQKNPSTSGKRIHNSPSKQKVTTPTKNRPKNIKCHQCPKRFASLDAYKTHVSIAHIGSRVFQCKICFKKFSRKRELDRHVTIHSGMKPFSCSQCDKKFVRKDKLDKHEQMHECLVVNMPCIECGATFEKKADLVAHIKSHFTDNFDEKISNTEIKKENEPDFPMEDNFYDET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00353374;
90% Identity: iTF_01021552;
80% Identity: -