Basic Information

Insect: Bicyclus anynana
Gene Symbol: -
Assembly: GCA_947172395.1
Location: OX359221.1:15744914-15763169[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0013 0.068 13.8 0.7 1 23 285 307 285 307 0.98

2 12 0.00015 0.008 16.8 1.4 2 23 315 336 314 336 0.93

3 12 0.03 1.6 9.5 1.4 1 23 340 362 340 362 0.97

4 12 0.00042 0.023 15.3 0.9 1 23 367 390 367 390 0.98

5 12 0.0018 0.095 13.4 0.2 1 23 394 417 394 417 0.94

6 12 0.0045 0.24 12.1 0.2 2 21 434 453 434 458 0.92

7 12 9.8e-05 0.0053 17.3 0.3 3 23 468 489 468 489 0.98

8 12 0.44 24 5.8 0.5 3 23 510 531 508 531 0.95

9 12 1e-05 0.00055 20.4 0.5 1 23 542 564 542 564 0.98

10 12 1.6e-05 0.00089 19.8 1.5 1 23 570 592 570 592 0.99

11 12 0.13 6.9 7.5 3.0 1 23 598 620 598 620 0.96

12 12 0.00013 0.007 16.9 0.1 1 23 626 649 626 649 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0013	0.068	13.8	0.7	1	23	285	307	285	307	0.98
2	12	0.00015	0.008	16.8	1.4	2	23	315	336	314	336	0.93
3	12	0.03	1.6	9.5	1.4	1	23	340	362	340	362	0.97
4	12	0.00042	0.023	15.3	0.9	1	23	367	390	367	390	0.98
5	12	0.0018	0.095	13.4	0.2	1	23	394	417	394	417	0.94
6	12	0.0045	0.24	12.1	0.2	2	21	434	453	434	458	0.92
7	12	9.8e-05	0.0053	17.3	0.3	3	23	468	489	468	489	0.98
8	12	0.44	24	5.8	0.5	3	23	510	531	508	531	0.95
9	12	1e-05	0.00055	20.4	0.5	1	23	542	564	542	564	0.98
10	12	1.6e-05	0.00089	19.8	1.5	1	23	570	592	570	592	0.99
11	12	0.13	6.9	7.5	3.0	1	23	598	620	598	620	0.96
12	12	0.00013	0.007	16.9	0.1	1	23	626	649	626	649	0.97

Sequence Information

Coding Sequence: ATGGGAGACTTTTTAGTGTGTAGGATATGTCTTGCGGAGGAGGTAAAGATGCATAACTTGCATAGTTACCCATTGGAAACATGTTATAAACTTTTAGTTGGTGATAATACACTTGCGTCATACTTGCCAGTAACTGCATGCTACGTGTGTGCAGCACAGTTGAGGAAACTATATACCTTCAAGGAGAAGTGTGTTAGGACTCAAGCTGCATTGACTCACATACTGAACTCTTGTGGAGAGATATCTAGTGATAGTATAAAACAGATAGACACACAAACCTTACACATAAACAACTGCTTAACCATAAACAAAAACCCAGATATAAATATAGCATCAGATATAATTCCTATCAAGGAAGAACCTTTAGATGGCGTACCTAATAATTACTTTGATGACAAAGAAAGTATCAAACTTGAAGATGGGTTTGACGATGTGACTTCTTTTTCAACTGATGAAGATGAGCCTTTGTCTGTGCATAAGGTGAAGAAAGAGGATAGCTGCAGAAAAGGGAGAAAAAGTAAAAGAAAAAAAGAGTCAGAGCAGAAATTAGATGATCAAGAGGATTTTAAATATGATGTCGAAATTGAAGGCCTCATCTTAGATATCTTGAAGGTTACAGATACAAGCTCTCTTCTGCAAGAAGCACCAGAAGTTGCAGTGAAGCGCCGACGCGGCAGGCCGAGGAAGAACGCCGAGAGCGGCGCTAAGACGCGCAGAACCAAGAACACCGGCGGAGTTCTGGCCGATGACATCGATCTGGAGAACTATTGCACTATTGTCAAGCTGTCAGAGGAGGAGCAGAAGGAAGAGATCATTAAGCGGCAGCAGTCGTCCAACTACCTCAACGCGCTGTACCAGTGCGACCTGTGCTACAAGGGGTTCATAAACACTGACGCGTGGAACCATCACATCGGCAAACACGACCCGAGCGCAGGCGACATCGAGTGTCCGATATGCAAGTTCCGCTTCAAGACGAAAAGAACTCTACAGAAGCACTCCGCCAACCACGAGAAGAAATACGCCTGCAAGTCCTGCAACTATGTTTCCAAAACGACAACCCAAGCTAAGCAACATCAGAGATGGCACAAGGGAGTCACGTACAAGTGTCAATATTGTGACGAAGTTTCAACCAAATGGACGTCGTACCTCAGCCACGTGCGCATCAAGCACCCGTCGGAGTTCATCTGCGGCGTGTGCGGGTACTCGTTCGTCAGCCGGCTGGGGCTCAACATGCACAAGACTATGATGCACAAGGGCGTGCGGGACAAAGAGGAATTCAAGGGGGACAAGGATACGCCATATTGCGAGCAGTGTGACGTCACATTCGTGTCTATCGAAGCCTTCAAGAGACACATGGTCACATCCGTCAAACACACGCAGAGTATTGACTTCAACAAAGGCTGCCGGATGTGCGGCGAGTCGTTCGCGGACGCGGAGGCGCTGCGGGTGCACCACCGGCGCGCGCACGCCAAGAAGCGGCCCAAGAACTACGGCAAGAAGCCCGCCAGCCTCGCCTGGCCCACCAACTGCGAGCACTGTTCGGAAGAGATCCCCAACGCGCGCGAGTACTGGTCGCACTTCCGGCGCGCGCACCCTGACAAGCCCTACCCCATACAGAAGAACTACATCTGCGACATTTGCGGCAAGAGCTTCCGGGGTAACGCGTTCCTAGTGTACCACAAGCGCACGCACTTCGAGGAGCGCGCGTTCAAGTGCGCGCAGTGCCCCAAGGCGTTCTTCAACCGCACCAACCTGCAGATGCACGAGAAGACGCACTCGGAGCACCGGCCGCACGCCTGCAGCGTCTGCGCCAAGGCCTTCAAGTGCAAGGGCGCTCTGGACAGGCACTTCAGGAGTCACACTGGGGTAAAGCCGTACGAGTGCGAGGTGTGCGGCAAGGCGTTCGCGCAGTCCAACAGCCGCAAGCTGCACGTGGCCACGGTGCACCTCAAGCAGCCCTCGCCCTACATCAGCCGCGCGCGCCTCGAGCGCCGGAACAAGACGCACAAGGACACGCACGCGCCGCACTTCTTGTATTGA
Protein Sequence: MGDFLVCRICLAEEVKMHNLHSYPLETCYKLLVGDNTLASYLPVTACYVCAAQLRKLYTFKEKCVRTQAALTHILNSCGEISSDSIKQIDTQTLHINNCLTINKNPDINIASDIIPIKEEPLDGVPNNYFDDKESIKLEDGFDDVTSFSTDEDEPLSVHKVKKEDSCRKGRKSKRKKESEQKLDDQEDFKYDVEIEGLILDILKVTDTSSLLQEAPEVAVKRRRGRPRKNAESGAKTRRTKNTGGVLADDIDLENYCTIVKLSEEEQKEEIIKRQQSSNYLNALYQCDLCYKGFINTDAWNHHIGKHDPSAGDIECPICKFRFKTKRTLQKHSANHEKKYACKSCNYVSKTTTQAKQHQRWHKGVTYKCQYCDEVSTKWTSYLSHVRIKHPSEFICGVCGYSFVSRLGLNMHKTMMHKGVRDKEEFKGDKDTPYCEQCDVTFVSIEAFKRHMVTSVKHTQSIDFNKGCRMCGESFADAEALRVHHRRAHAKKRPKNYGKKPASLAWPTNCEHCSEEIPNAREYWSHFRRAHPDKPYPIQKNYICDICGKSFRGNAFLVYHKRTHFEERAFKCAQCPKAFFNRTNLQMHEKTHSEHRPHACSVCAKAFKCKGALDRHFRSHTGVKPYECEVCGKAFAQSNSRKLHVATVHLKQPSPYISRARLERRNKTHKDTHAPHFLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01021559;
90% Identity: -
80% Identity: -