Bany016602.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- Zfa
- Assembly
- GCA_947172395.1
- Location
- OX359229.1:9128062-9141935[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00061 0.033 14.8 0.9 1 23 254 276 254 276 0.98 2 11 0.087 4.7 8.0 5.4 1 23 283 305 283 306 0.95 3 11 0.22 12 6.8 0.3 1 23 309 332 309 332 0.89 4 11 1.6e-06 8.6e-05 22.9 2.5 1 23 339 362 339 362 0.95 5 11 0.0005 0.027 15.1 0.5 2 23 369 391 368 391 0.93 6 11 6.4e-06 0.00035 21.0 1.8 1 23 404 426 404 426 0.97 7 11 5.4e-06 0.00029 21.3 0.2 1 22 432 453 432 457 0.93 8 11 4e-05 0.0022 18.5 1.2 2 23 466 488 465 488 0.96 9 11 0.01 0.54 11.0 0.6 1 23 494 517 494 517 0.94 10 11 1.4e-08 7.8e-07 29.4 0.4 1 23 526 548 526 548 0.99 11 11 0.00052 0.028 15.0 0.0 1 23 554 577 554 577 0.96
Sequence Information
- Coding Sequence
- ATGGGAACAACAGAAGCAACACACTATTGTATGGGATGTTTATCTCATAGAGACGATAAACACACTGAGCCCTATAATATTCAAAGCGAGGCTTTGAAAGCAGTACTTCAGGTAAATGAAGTGATGTTATGTTATATTTGTACAAAATTCATACTCAAGAGTGAACAGTTCGTACAGAATGTGCAAAGAAATCAGAAATATTTAGAAAATTCCCAAAACCTTGCAGATTCAACACTTGAGACAAGTACTCATAAACACCAGTTGGTCAGTCTATCCGTTGTATCATTGTATTCAATTAATCTGACCGGTGACAGCAATGACTTGGAGATGCCCATTGTTACTGTATTAAGTTCACAAACCAACGAGGTTACAGTCAAATTAGAACCCAAAGAGGAATTGTCTTTGGAATATTCGGATCAAGAATTCATAGATGATCATGATTTACAAGAATCCTCTATTAAAGAGGAAGAATGTTTATTGAACAATTTTAAAGAAGAAAACGGACAAACTCTGGACAATATCAGCTTAAGACAACTCAAGAAAGCATTAAAGGCGGGGAAAATTAAAAATAAAATCAAATCACCAAAAAAAGAAAATCAACAAGACAAAGAAAAAAAGGAAAAACTCAAGAAACAGCAAAAACTTAAAGACCGACGGGATCTACAAAACTTAAACATACAAAAGTTAAACATAACGTTGGAACAATGTATGAAAGATAGAACAAAAATGCGAGAGGACCCCAAATATAAGAACTTGTATTACAAATGCATGGATTGTATTAAAGGGTTTAGTTTTAAAGAATCTTATGAGAAACATATGGAGGTGCACAGCAAGGTAAGAGGGGAATTTGAGTGTGACATATGCAAGCGGAGAACTGATACTTTACATAAACTGTTGGAGCATAAGAAATACCATCATATCCGCTACCGGTGCGGCGAGTGTGGGCTGACCCGTATCAACCGGTTCACTATCAAAGACCACTACACCGCCGCCCACCTGAGCGATGTCTGCCAGTACAAGTGTTCACACTGCAGCAAAGTGTTCAATCGACAAGTATCCCTGAGAAAGCACATAGCATATGTACATAGGAGCAAGAATAGGATAGAGTGCAAATATTGTTCGAAGACATTCGCCAATAAGGAAAGTGTAAAGGGACATGTTATGCTAAAACATCCAACAACGGAATCGTCTGGTCAAACGTTCACCCACCACGTATGCAAAGACTGCGGTGGCGGTTTCAAAACTCTTTCTCAACTCAAGAATCACATGACCAAGCATTCTGACCAAAGGGACTTCTACTGCGTGGAGTGCGATAAAGCTTTCAAAACGAGCTACGCGTTAAAACAACATCTCAAAATTGCCGCGCCACACGTCAACTACATGGAATTCAAACTACAATGCGAACACTGTGAGAAGCGGTTCGCGGTCAAGCGTGAGTTGGAACAACATTTGAACAGGGTCCATCTCAACCGAAAGCCCTACCAGTGCGACAAATGCGACAAGGCGTACCTCTCTCTGTGGTCGCTGACGGAACACAAGAAATTCGCGCACGACGGCCACAAGCGACCCTTGAAGTACCCCTGCCCCCAGTGTGACAAGGTGTTCGCACAAAACTCCACACTCAAGTCACACCTACGCACACACACCGGCGAGCGACCGTATATGTGTGCGGAGTGTCCCGCTGCCTTCACACAGGGAAGCAGCCTACGCACGCACGTCAAGTTGGTGCATCTGCGTCTAACAAGAGATGGACTGCCCAAGAGACACGCCGCCACCGCCAGCTCCTAG
- Protein Sequence
- MGTTEATHYCMGCLSHRDDKHTEPYNIQSEALKAVLQVNEVMLCYICTKFILKSEQFVQNVQRNQKYLENSQNLADSTLETSTHKHQLVSLSVVSLYSINLTGDSNDLEMPIVTVLSSQTNEVTVKLEPKEELSLEYSDQEFIDDHDLQESSIKEEECLLNNFKEENGQTLDNISLRQLKKALKAGKIKNKIKSPKKENQQDKEKKEKLKKQQKLKDRRDLQNLNIQKLNITLEQCMKDRTKMREDPKYKNLYYKCMDCIKGFSFKESYEKHMEVHSKVRGEFECDICKRRTDTLHKLLEHKKYHHIRYRCGECGLTRINRFTIKDHYTAAHLSDVCQYKCSHCSKVFNRQVSLRKHIAYVHRSKNRIECKYCSKTFANKESVKGHVMLKHPTTESSGQTFTHHVCKDCGGGFKTLSQLKNHMTKHSDQRDFYCVECDKAFKTSYALKQHLKIAAPHVNYMEFKLQCEHCEKRFAVKRELEQHLNRVHLNRKPYQCDKCDKAYLSLWSLTEHKKFAHDGHKRPLKYPCPQCDKVFAQNSTLKSHLRTHTGERPYMCAECPAAFTQGSSLRTHVKLVHLRLTRDGLPKRHAATASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -