Bany016389.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359229.1:1096023-1107334[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.38 20 6.0 0.1 1 23 169 191 169 191 0.97 2 20 0.11 5.7 7.8 1.9 1 23 198 220 198 220 0.97 3 20 0.2 11 6.9 0.1 1 23 224 247 224 247 0.97 4 20 2e-05 0.0011 19.5 2.6 1 23 252 275 252 275 0.96 5 20 0.1 5.5 7.8 2.3 2 23 282 303 281 303 0.96 6 20 7.8e-06 0.00043 20.8 1.6 2 23 316 337 315 337 0.96 7 20 0.0061 0.33 11.7 2.9 2 23 344 365 344 366 0.95 8 20 0.12 6.5 7.6 0.1 3 23 379 400 377 400 0.90 9 20 0.016 0.85 10.4 0.5 1 23 407 430 407 430 0.95 10 20 0.03 1.6 9.5 0.0 6 23 440 458 439 458 0.90 11 20 1.2 62 4.5 0.1 3 10 469 476 468 481 0.91 12 20 0.03 1.6 9.5 0.0 6 23 485 503 484 503 0.90 13 20 1.2 62 4.5 0.1 3 10 514 521 513 526 0.91 14 20 0.03 1.6 9.5 0.0 6 23 530 548 529 548 0.90 15 20 1.2 62 4.5 0.1 3 10 559 566 558 571 0.91 16 20 2.2 1.2e+02 3.6 0.0 6 17 575 586 574 587 0.92 17 20 1.2 62 4.5 0.1 3 10 604 611 603 616 0.91 18 20 0.24 13 6.7 0.0 6 23 620 638 619 638 0.90 19 20 0.0018 0.095 13.4 0.1 3 23 649 669 648 669 0.97 20 20 1e-05 0.00056 20.4 1.4 1 23 674 697 674 697 0.97
Sequence Information
- Coding Sequence
- ATGTCTCTTGAAATACAAATAAAAAAGGAGCCTGTAGATCCAGGAGATACAGAAAACAGTGAGGATCCAAACTCAAATCTAGAACAGCCTGGATCTACCATCAATCCAGAGTTTATAAATAATTTTGTTGGAATAAAACAAGAGGTTCCAGAAGTAGAAATAAAATTGGAGCCCCTTGATCAGTGTGATGATGATGATGATGTTGATCTTAAAGATGATGTGGATCCGGAGAGGGTGATGATGAAGTTGGAGCATGAAATGTATGTTAGCAATGAACCATTGAAACTAAGTACTCCAAAACCGCCAAAACCGGCGAAACAGTACAAGAAAAAAGATTCAGACGATTCCGATGAAGATTATTTGCCACACATGAAAACTGTTAAGAGAGACGACGAACAAACATACTCTGAGGAGATAACCAGCCAGATAGACATAGTGACCATAGACGAGGAGGCACGTAAGAACGAGCATAGTATAGCTCTCAGCGCGCGCAAGCACATGAACTACGTCTGCGAACACTGCGCCGTGGGCTTCGTCATCGAGGAGGCGTACTCCATGCATCTGAAGATACACGCCAAGGAAGCTGGTGAGCACGAGTGCGACATTTGCACGGTGCGTCTGAAGACAACAGACATGCTGTACCAGCACAAGCTGCGCCACTACCGACGCTACCGGTGCTCCATATGCGAGTTGCAGCAGCGGGACAAGGACACTGTTGCGGCACATATAATGAGAGAGCACATGGGCATCGCGTTTGTATGTCAGCACTGTGGGAGGGATTTCAAGCGGCCGCAGTACCTCAGCCGACACGTCAAGCAGATGCACACCAAGCCGCTGCACCTGGAGTGTCCCGTGTGCCAGCGCGTGTTCCACGAGCGCGGCTGGTACCGCTGTCACGTCAGGACGCACAACGAGCAAGTGCGCAACGGCATCACGCGCAAGGTGGTGTGCTCGCACTGCGGGCGCCAGTTCCGCAACAAGCAGTACCTCATCCGCCACCTGTCGGTGCACGAGGACCGCAACCCGCGCACGTGCGAGTTCTGCACGCGCACCTTCAAGAACGGCGAGGTGCTGCGCGTGCACCAGCGGCAGCACCACGGCGACAACCCTGTGCGGTACGGTGCAGACACGACGTGCATAGTGTGCGCGCGCATCCTGACCACGCCCGCCATGCTGGCGCGACACATGCAGCGCATGCACACCGAGAGGATCAAAAAGTTCCAGTGCGACTACTGCCAGCGGCTCTACTTCTCGAAGGCGGAGGTGCGCTCGCACATCGAGTGGTCGCACCTGAAGTGGCGGCGCCACGCGTGCGCGTGCGGGCGCGTGTTCCGCTCGCCGGCGCTGCTGCGCGACCACGCGCTCGCGCGCCACCTCAACGTGCGCCAGCCGCGCGACAAGGCGTGCACCGTCTGCGGGAAGATGTTTGCGTGGCGGCGCCACGCGTGCGCGTGCGGGCGCGTGTTCCGCTCGCCGGCGCTGCTGCGCGACCACGCGCTCGCGCGCCACCTCAACGTGCGCCAGCCGCGCGACAAGGCGTGCACCGTCTGCGGGAAGATGTTTGCGTGGCGGCGCCACGCGTGCGCGTGCGGGCGCGTGTTCCGCTCGCCGGCGCTGCTGCGCGACCACGCGCTCGCGCGCCACCTCAACGTGCGCCAGCCGCGCGACAAGGCGTGCACCGTCTGCGGGAAGATGTTTGCGTGGCGGCGCCACGCGTGCGCGTGCGGGCGCGTGTTCCGCTCGCCGGCACTGCTGCGCGACTACGCGCTCGCGCGGCACCTCAACGTGCGCCAGCCGCGCGACAAGGCGTGCACCGTCTGCGGGAAGATGTTTGCGTGGCGGCGCCACGCGTGCGCGTGCGGGCGCGTGTTCGGCTCGCCGGCGCTGCTGCGCGACCACGCGCTCGCGCGCCACCTCAACGTGCGCCAGCCGCGCGACAAGGCGTGCACCGTCTGCGGGAAGATGATTGCGAACCAGCAGGTCCTGACCCGCCACATAAAGGGCCACTCGGGCGAGACCTACCCGTGTACGGAATGCGGGCAGAAGTTCAAAACGCAGTCCTACGTCAAAGTGCACTACAAGATAAAGCATCTCAACATGACACGAGCGCAAGTCAAAGCGGAGACGAAAAGGAAACTCATCATGGTGCACAGTGAAGAAGCGATGAATGCCAAGATCAAGGTCAATAAGAAATCCAAAATGGCCGCTACCGAGGATCCGCTGAATTTGGACAATTTTGAAAATGATGAACCGGCTGTGGTGAAGAAAGAGGTGTTGGACGCTCCGGTGCCGCTGTTTGAAACGTTTGTGGATATACAGCGGGAGTGTTGA
- Protein Sequence
- MSLEIQIKKEPVDPGDTENSEDPNSNLEQPGSTINPEFINNFVGIKQEVPEVEIKLEPLDQCDDDDDVDLKDDVDPERVMMKLEHEMYVSNEPLKLSTPKPPKPAKQYKKKDSDDSDEDYLPHMKTVKRDDEQTYSEEITSQIDIVTIDEEARKNEHSIALSARKHMNYVCEHCAVGFVIEEAYSMHLKIHAKEAGEHECDICTVRLKTTDMLYQHKLRHYRRYRCSICELQQRDKDTVAAHIMREHMGIAFVCQHCGRDFKRPQYLSRHVKQMHTKPLHLECPVCQRVFHERGWYRCHVRTHNEQVRNGITRKVVCSHCGRQFRNKQYLIRHLSVHEDRNPRTCEFCTRTFKNGEVLRVHQRQHHGDNPVRYGADTTCIVCARILTTPAMLARHMQRMHTERIKKFQCDYCQRLYFSKAEVRSHIEWSHLKWRRHACACGRVFRSPALLRDHALARHLNVRQPRDKACTVCGKMFAWRRHACACGRVFRSPALLRDHALARHLNVRQPRDKACTVCGKMFAWRRHACACGRVFRSPALLRDHALARHLNVRQPRDKACTVCGKMFAWRRHACACGRVFRSPALLRDYALARHLNVRQPRDKACTVCGKMFAWRRHACACGRVFGSPALLRDHALARHLNVRQPRDKACTVCGKMIANQQVLTRHIKGHSGETYPCTECGQKFKTQSYVKVHYKIKHLNMTRAQVKAETKRKLIMVHSEEAMNAKIKVNKKSKMAATEDPLNLDNFENDEPAVVKKEVLDAPVPLFETFVDIQREC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -