Bany011579.2
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359223.1:7767396-7778374[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.3 16 6.3 0.3 1 20 7 27 7 29 0.91 2 14 0.00089 0.048 14.3 0.0 3 22 36 55 34 55 0.95 3 14 0.61 33 5.4 0.6 1 21 215 232 215 235 0.68 4 14 6.3e-05 0.0034 17.9 2.8 1 23 335 357 335 357 0.99 5 14 0.00013 0.007 16.9 1.0 1 23 370 392 370 392 0.98 6 14 0.00097 0.053 14.2 0.2 3 23 446 466 444 466 0.96 7 14 0.0016 0.087 13.5 2.0 1 23 482 504 482 504 0.97 8 14 2.9e-05 0.0016 19.0 2.2 1 21 510 530 510 530 0.97 9 14 1.6e-06 8.8e-05 22.9 4.5 1 23 536 558 536 558 0.98 10 14 0.0022 0.12 13.0 3.6 1 23 564 586 564 586 0.97 11 14 1e-05 0.00055 20.4 0.4 1 23 592 614 592 614 0.98 12 14 0.00012 0.0065 17.0 0.2 1 23 618 640 618 640 0.98 13 14 0.00062 0.034 14.8 0.1 1 23 648 671 648 671 0.96 14 14 0.00062 0.034 14.8 0.1 1 23 686 709 686 709 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTGCCGCTTCTGTATACCTGTCCACTATGCTGCAATAATACGTTTAACTCCAAGGAAGCTCTTGCAGAACATTTGATACAAATATCACTGAATATTGCATGCTCAATATGTAACGAAACCTTTGCTTCATTGGAGTTACTCACAGAACATCTTAAGACCGATAACTGTGAGGGTTTGAGTCAAGATGAGGATGTTGTCCTTGAAAATGACCTGAATAACATTATCAAAGTTGAAAATGATATGAACTCTGTAAACTCAGACTCCATACAGGAGAATGAAGTCATCACAGAACAAAGTAATCTACAAACCAACACAATAGGCAGAATAAAATTAAACAATGTAAATGTTGACTCTGACGGAGGCAAAATGTATGTAGAACTTCTAAGCAAACAGTTGACAAAATCTTGCCTGCATGCACAAGAAGTGAAACTGGTGAAGGAAGGTGGCCAAAGTCGTTATGTAATCCTGGACTCACTGTTGAACCCAGATGTTACTATTGTTACTAAACAAAACAATGATGGCACTATATCTTTAACCACACTGAAAGATACTGAGGTTATTCAAAATGGTGATTCTGAATTGGAATCTGAAGCAGTAAGTGATAACGACACAGCAGACAGGAGCGGTGAAGAGATCTACACATGCAATACTTGCAGTGTTTCATTCTCATCAGTGTTGGAGCACATACAGACATATCACAACAATGAGGATGTTGTTGTCCATGATAATGGCAACACAGATCTACCTATACAATTTGAAAAAGATGAAATGACAGATAAACAATCCTCGCGTAGAATGATAACAGAGACTGGCAACATTGTAGAAGCACCTGTGTCGTCAAATCAGACAGATCAAAGCAACATATACCACAAGGTGGTGGTGAAAGAGATACAAACGCCGAACGGTGACAAGGCGAAAATGTATAACTGCATGACATGCAACCTATACGTCTCCTCTCTGGGAGAGTTCAAAAAGCAGCCGTGCAAAGTTCTGAAATACCAATGTCTACACTGCCCAGTTGAATACTCGAATTCGAAGTCGTTATGCGCCCACATGAAAGTGCATAAATCAAAAAACCAAGAAACCAAAGTGCCAGCAAAATACGAATGCGAGATTTGCAACACACTGTTCCCCACGAGCAAGTCCCTAAAGTTGCACAAGAAAATGCACGATCCTGTCAAGTCCCGACCCATAGAGCCTCCTTTAGAAACGCCAGAGGGCATGCCGCCCAGTGACGACAAGTATCTATGCTCCACGTGCAACAAACTAATACCCATAGACTATAGAACCATACACCAGAACTCCCACAAGTCAAACAACAAAATGAATTGTGATATATGCAACAAGAAGTTCCTCTCCCAAGAGTATTTGGAAATGCATATGGCTGTACATAAAACAGATAAGGTAGTTGTGGAAAAGAAAGACAAACTGCTGCCGTACGACTGTTTGTATTGCAATAGAAAATTTGCTCGGCCCCATGAGAAAGTCAAACATGAAAGGATACATACAGGTGAGAAGCCGCACTCGTGTGAGATATGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCCCTCGTGAGAAGCCGCACTCGTGTGAGATATGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACTGGCGCGCGCCCCTACGCGTGTCCACTTTGTAACAAGAGGTTCAAAGCGCACAGCGTGTACAACCACCACCTGCTGACGCACTCGGACGTGCGCGCGTACAAGTGTCCCTTCTGCCCCAAGGCGTTCAAGACGTCCGTGCAGCTCGCCGGACACAAGAACTCGCACACCAAGCCCTTCTCTTGCCAACAGTGCAATAGGCCATTCGCGTCACTGTACGCGGTGCGGGTGCACATGGAGACACACTCGCGGCAGAACAGTCTGAAGTTCTCGTGCACGCTGTGTGGCGCGAGCTACGCGCGCGCGTTCGCACTGAAGGACCACGTGAAGCAGGTGCACAAGCAGGACATCGACACTACGGAGAGCGTGAACAGTCTGAAGTTCTCGTGCACGCTGTGCGGCGCGAGCTACGCGCGCGCGTTCGCGCTGAAGGACCACGTGAAGCAGGTGCACAAGCAGGACATCGACACTACGGAGAACGTGGTGAGTTGCACATGGAGACACACTCGCGCGGCAGAACAGTCTGAAGTTCTCGTGCACGCTGTGCGGCGCGAGCTACGCGCGCGCGTTCGCGCTGAAGGACCACGTGAAGCAGGTGCACAAGCAGGACATCGACACTACGGAGAGCGTGGTGAGTTGCACATGGAGACACACTCGCGGCAGAACAGTCTGAAGTTCTTGTAA
- Protein Sequence
- MEVPLLYTCPLCCNNTFNSKEALAEHLIQISLNIACSICNETFASLELLTEHLKTDNCEGLSQDEDVVLENDLNNIIKVENDMNSVNSDSIQENEVITEQSNLQTNTIGRIKLNNVNVDSDGGKMYVELLSKQLTKSCLHAQEVKLVKEGGQSRYVILDSLLNPDVTIVTKQNNDGTISLTTLKDTEVIQNGDSELESEAVSDNDTADRSGEEIYTCNTCSVSFSSVLEHIQTYHNNEDVVVHDNGNTDLPIQFEKDEMTDKQSSRRMITETGNIVEAPVSSNQTDQSNIYHKVVVKEIQTPNGDKAKMYNCMTCNLYVSSLGEFKKQPCKVLKYQCLHCPVEYSNSKSLCAHMKVHKSKNQETKVPAKYECEICNTLFPTSKSLKLHKKMHDPVKSRPIEPPLETPEGMPPSDDKYLCSTCNKLIPIDYRTIHQNSHKSNNKMNCDICNKKFLSQEYLEMHMAVHKTDKVVVEKKDKLLPYDCLYCNRKFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRPREKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPLCNKRFKAHSVYNHHLLTHSDVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCQQCNRPFASLYAVRVHMETHSRQNSLKFSCTLCGASYARAFALKDHVKQVHKQDIDTTESVNSLKFSCTLCGASYARAFALKDHVKQVHKQDIDTTENVVSCTWRHTRAAEQSEVLVHAVRRELRARVRAEGPREAGAQAGHRHYGERGELHMETHSRQNSLKFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -