Bany006706.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- zfh1
- Assembly
- GCA_947172395.1
- Location
- OX359230.1:8867080-8877010[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.0091 0.49 11.1 0.2 2 21 222 241 221 242 0.93 2 27 0.13 7.2 7.5 0.1 3 21 250 267 249 270 0.85 3 27 0.0057 0.31 11.8 0.2 1 23 303 325 303 325 0.95 4 27 1.4 76 4.2 3.9 2 21 329 348 328 349 0.92 5 27 0.00047 0.025 15.2 0.9 1 23 388 411 388 411 0.96 6 27 0.94 51 4.8 0.7 2 23 418 438 417 438 0.84 7 27 0.0078 0.42 11.3 0.4 1 23 444 466 444 466 0.98 8 27 0.019 1.1 10.1 2.4 1 23 472 495 472 495 0.97 9 27 0.0038 0.21 12.3 1.1 1 23 503 526 503 526 0.94 10 27 0.11 5.8 7.8 2.1 1 21 536 556 536 557 0.94 11 27 4.9e-05 0.0026 18.3 1.7 2 21 671 690 670 691 0.94 12 27 0.53 28 5.6 0.5 2 23 696 717 696 717 0.94 13 27 0.0067 0.36 11.5 0.4 1 23 722 744 722 744 0.94 14 27 0.012 0.66 10.7 0.9 2 23 750 771 750 771 0.96 15 27 0.15 8.2 7.3 3.7 1 20 774 793 774 795 0.92 16 27 2.2e-05 0.0012 19.4 0.5 1 23 810 833 810 833 0.95 17 27 0.51 28 5.6 2.4 3 23 841 861 839 861 0.93 18 27 1.9 1e+02 3.8 0.3 1 23 895 918 895 918 0.88 19 27 0.00095 0.051 14.2 0.8 1 20 925 944 925 946 0.94 20 27 0.00093 0.05 14.2 0.7 2 21 1053 1072 1052 1073 0.94 21 27 0.00012 0.0067 17.0 1.3 2 23 1135 1156 1134 1156 0.96 22 27 0.87 47 4.9 1.3 2 20 1160 1178 1160 1180 0.91 23 27 9.8e-05 0.0053 17.3 2.3 1 23 1206 1229 1206 1229 0.96 24 27 0.00059 0.032 14.9 0.5 1 23 1235 1257 1235 1257 0.95 25 27 0.13 7.2 7.5 0.1 1 23 1263 1285 1263 1285 0.97 26 27 0.0071 0.38 11.5 0.8 1 23 1291 1314 1291 1314 0.94 27 27 0.012 0.65 10.7 4.8 1 23 1320 1343 1320 1343 0.97
Sequence Information
- Coding Sequence
- ATGAATAGGCAGGTTGATGTAAAGGCTCTAGTGTCGCATGTAATTCGCGGCGACGGTGCAAATAAATGCCGAATATGTATGGGAGAAACTACAGAAGGACAAGTGCATTTAAGTGATACAGTTTTAATGGAAGGAGATAAACCCCTAACATTATCCGAAGTGCTGGAAATCGTCACAGGAATTCAGGTGCCGCTGGATGGTGACCTGCCATCCGGTGTGTGTGTGGACTGCTACTCCTGCGCTCTGAACGCTGCTAACTTCAGAACGATGTGCTGGCAAACGTCCTACAGATGGGACACGACCCTGCAGGTTCTGCACGAACTACCCTCACAGCACATTGGAAACAACAAACTGATGTTTGCTATACTTGACGATGAGCAGTTGTTTGTTGTCATTGATGAGGAAGAGTTAAATACAGACACAGCATTCGAAAGATTGGGAAAGCATTTGAGTACTAGTGATGCGATAAATGAAAGCCATGAAGAAATAAGCAAAAATGTGTCTGACAGCCATAATGAAATTCATCCCACTGTGGAAAAAAATGAATCTGAAGTCCATGATAAAGGTCATCCCATCAAGGATGCGTTAAATAAAAATATTCAACAATTAGAAGATCTGACAACACAATCAATTGGAAGCCATTTGGACATCCGAGGCCGAATGGAATGTCCGAATTGTGAAAAAAATTTTGATAATCCATTGAATTTTTATCAACATTTGAATCGTTCAATGGATATGAAAAGAGCGTGCCATGTTTGTGGTAAAGTGACGTCACGGGACGCGCTGGTCTCCCATCTCGTTGACGCTCACAATGTAAAGGTCCACGAATGCAAGAAGTGCTCCGCTCTGCTACTAACTGCTAACGCATTTAACAAACATTTAAAAAAAGCGCATTCGCCCGGCGCCTTCGCGTGCGTCGACTGCGGACAGTCGTACCAAACGCAAAACGCCTTCAGAGTCCACGAGTCTATACATAGACAAAAAACTTGCCGAAATTGCAAAAAAATATTCCGCAACCTTAAGTGTTACATGTATCACGTTCAGAAATGCAAATTAAACGATCCAGTTGACATTAAAGATAAAACAGAAATGAGGTCTACCCTCGAAATGGAAAATCGTAAAAGGACCAAAACAGGCACACGAGGTAGCTTTGAAGGGACTTTCATTTGTGATTACTGCAATAAACAGTTCGCCAAAAAGAAGTACATCACATCACACATACAAATAGTCCATTTGAAGAATACTCACAGTCCATGCGTATATTGCGGGAAGTCCCTAGCGACTGCCCACATGACTGAGCATTTGAAAAAACACGAACTGGACTTGTCGTTCAAATGCCAACAATGCGGCATAGTCCTTAAAAGCAGGTTAGGTTACATCCAGCATTTGAGGCTGCATACCGGAGAGCGTCCGTACGCATGTGAAATATGCAACGAGACCTTCTGCGCATCGTCCCGCCGTTCGGAGCATATGCGTAAATTCCACAAAGCGCCGAGGGAATTGAAGCATGCATGCAAGCTTTGCCCTGCCAAATTCCGATTACCATACAGGTTGAAGAAGCACATGAATGCCTTGCATACAAACAAAAGTGAGGAATCAAACTTTTATGAGTGCAAGGAATGCCGTGAGAAGTTCGGCTCCTGCCGGGGATTGCTGCATCACAGCAGAGTCTTGCCGGAGACCGAACTGCCAGTCGTACTCTGCAGGGAATGCACGAACAGTGCATTTTACGCATGGAACTTCAAATCCTTGTGCAGCAATTCCGAACTAGAATGGAAGGAGGCAGTCAACGTCCTATCCAATAACGCAGAATTGATAAAACCAAATACAGAAGACAAGATATTTTACATGCGTTTCGATAAAGAAGGAGCCGTTTTCAAAGACCACGTGGCCAAAATATATTCATTGGCAGAGGCCGCCAACAGATTCGCTGACGTCCTCAAGAGCAACAGAAAGCTGGAACGAGAAAAATCGAAAAAGTTGATTGAACCAAAGATACGGTTCTCAACCAAATGCCATATGTGCGGAAAAGATTTCAACAACCCCCAACATTTGAACCAGCATTTGATGAGCACGGCCAAGGGTGTTTGCTCGGTTTGCGGAAAAATTATGCCGAAGGAAAAGCTGCAAAAACACTTGAAAAGCCGTCACAATAAATACGTGTTTCCCTGCGAGATTTGTCTCCAAATTTTCGAGGACCAATCGAGTTTAAGCCATCATTCAGAACTCCACGCATCTGGTATGCCTCAATGCAAAGTGTGCAAACACGGTTTCAGGAACGACAGAGCGCTGTTAGCACACATGTACGCCCACACACTGTTCGTCTGTTCCAATTGTAGCAAGAGTTTCGAGAACCGCAAATGCTATATGTACCACAAGGAAAGTTGCTCGGCGACCAGACCACAAGAAGTTGAAGTTGACGGGGTTTACGAATGCGATGAATGCGGAAAGAAGTACACCAAGAAACCGTCGCTGAGGATCCACATAATCCAGAAGCATCTGAACGTGCTGCCAATAATTTGCCAAATTTGTGGGAAACGCAGCGCCACTAAAAACCATCACAAATCTCACGAGCTGGTGCACAAGAAAGAACGTGAGATGTATCAGTGTTATTGCGGAGCCAAGATGAAGACCGCCATCGGTTTCCACATGCATCAAAGGATTCATTCTGGGGAAAAGCCGTACGAGTGTGAAGATTGCGGCGACAGGTTTCTCTCTGCGTCTCGAAGGCTGGATCATATAAAAAGAAGGCACCGGAGCGGCAAACCCTCTCATAGTTGTAAAAAATGCGGCGCAGGTTTCATAAGACCGTTCGAATTGAAGAAACATCATCTGGCTATAGAGGATGAGCCGACATGTCCAAAGATGCTCTGCGTGCCGTGCACCCACTACGCTGTCTCTGCTTACGAATTCCGTCTTTTCGCCAGGAACTCGCAGAAACTGTGGCACAATTGCGTCTCATCCATAGACAACCTCTTCCCTTTGACCACCAACAAGTCTTTCTACGTCATCATAAAGGAAAATCTACTATTGCAAAGTTTCAACAACTTTGAGGGTACTTCGAAAGATTTGGCGCATCATTTGACCAATCGTTTTAAGAAGAAACCGATAGCTACTGAGAAGAAGCCTCGTCATCCGCGTAGCGGGCCGTCTTGTGAATGCACTGATTGTGGCAAGGCGTTCCTGAGTCCTTACTACCTTAACACTCATTTGAGGAACAGTGGACAGAAGGAGGCGTGCTGGTTATGCGGAGCTGTGCTCATACGGGGGCCACAGATGAAGCAGCATTTAGAGGACGTTCACAACACCGTCATGCATCTGTGTTCAGAGTGTCCGGTTCTGTTGAAAAGTGCAGTAGACAAGAGGAAACACGAGAAAAAGTGCCACGGTCCAGGCAGGTTGACTTGCAACGATTGTGGCAGAACTTTCCAGAGGAAAAACTCCTTCGAGGTGCATTCTCAAATGCACACGGTGAGGACGTGCAGAGCGTGCGGAATGCAGTTCACGAACCGAGGATGCTATAGAGAACATAGAGCAAAGTGCGAGCCGGACGCTAAGCCCAATTTGAAACTGATACCCAGAAGTCGACGCTCGAATATTAGGGACCCTGCGACTTTTACCTGTGACTATTGCAACAAAACCTACCACTCTAGACCGCAGTTAAAAAACCATATACAATGGATCCATATGGATATAAGACCTCATCAATGTCAGTGGTGCGGAAAAAGGTTTTATACTCCAGCGCGTTTAGCCGAACACACGGTCGTCCATACGCGCGTTAGAAATTTCGAATGTGACATTTGTGGCGCGAAACTCGTATCCAAGATGGCCGCCGTGTACCATAGACGACGCCACACTGGAGAGAAGCCTTACGAATGTCAAGACTGTGGAGAAAAGTTCATATCCTCCTCGAGGAGGTCCGAGCACGCCAAACGTAGACACAACAAAGGGTCCAGGTTTCAATGCACTCTCTGTCTATGCAGTTTTGTCAGAACTCACGAACTGAAGAAGCATGTGCTTAAAGTGCACAACCCAGAAAGTCCGATTATGGTCAAAGTTAAAAAGGTCAAGGAGTTTGTTAAAGCTAATGTTTAA
- Protein Sequence
- MNRQVDVKALVSHVIRGDGANKCRICMGETTEGQVHLSDTVLMEGDKPLTLSEVLEIVTGIQVPLDGDLPSGVCVDCYSCALNAANFRTMCWQTSYRWDTTLQVLHELPSQHIGNNKLMFAILDDEQLFVVIDEEELNTDTAFERLGKHLSTSDAINESHEEISKNVSDSHNEIHPTVEKNESEVHDKGHPIKDALNKNIQQLEDLTTQSIGSHLDIRGRMECPNCEKNFDNPLNFYQHLNRSMDMKRACHVCGKVTSRDALVSHLVDAHNVKVHECKKCSALLLTANAFNKHLKKAHSPGAFACVDCGQSYQTQNAFRVHESIHRQKTCRNCKKIFRNLKCYMYHVQKCKLNDPVDIKDKTEMRSTLEMENRKRTKTGTRGSFEGTFICDYCNKQFAKKKYITSHIQIVHLKNTHSPCVYCGKSLATAHMTEHLKKHELDLSFKCQQCGIVLKSRLGYIQHLRLHTGERPYACEICNETFCASSRRSEHMRKFHKAPRELKHACKLCPAKFRLPYRLKKHMNALHTNKSEESNFYECKECREKFGSCRGLLHHSRVLPETELPVVLCRECTNSAFYAWNFKSLCSNSELEWKEAVNVLSNNAELIKPNTEDKIFYMRFDKEGAVFKDHVAKIYSLAEAANRFADVLKSNRKLEREKSKKLIEPKIRFSTKCHMCGKDFNNPQHLNQHLMSTAKGVCSVCGKIMPKEKLQKHLKSRHNKYVFPCEICLQIFEDQSSLSHHSELHASGMPQCKVCKHGFRNDRALLAHMYAHTLFVCSNCSKSFENRKCYMYHKESCSATRPQEVEVDGVYECDECGKKYTKKPSLRIHIIQKHLNVLPIICQICGKRSATKNHHKSHELVHKKEREMYQCYCGAKMKTAIGFHMHQRIHSGEKPYECEDCGDRFLSASRRLDHIKRRHRSGKPSHSCKKCGAGFIRPFELKKHHLAIEDEPTCPKMLCVPCTHYAVSAYEFRLFARNSQKLWHNCVSSIDNLFPLTTNKSFYVIIKENLLLQSFNNFEGTSKDLAHHLTNRFKKKPIATEKKPRHPRSGPSCECTDCGKAFLSPYYLNTHLRNSGQKEACWLCGAVLIRGPQMKQHLEDVHNTVMHLCSECPVLLKSAVDKRKHEKKCHGPGRLTCNDCGRTFQRKNSFEVHSQMHTVRTCRACGMQFTNRGCYREHRAKCEPDAKPNLKLIPRSRRSNIRDPATFTCDYCNKTYHSRPQLKNHIQWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGEKPYECQDCGEKFISSSRRSEHAKRRHNKGSRFQCTLCLCSFVRTHELKKHVLKVHNPESPIMVKVKKVKEFVKANV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -