Bany014608.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359231.1:1694775-1730161[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.35 19 6.1 4.7 1 23 266 288 266 288 0.98 2 27 0.79 43 5.0 1.1 3 23 297 318 295 318 0.91 3 27 0.13 7.2 7.5 0.1 1 23 322 344 322 344 0.97 4 27 0.0004 0.022 15.4 1.0 1 23 349 372 349 372 0.98 5 27 0.015 0.84 10.4 0.3 5 23 380 399 377 399 0.91 6 27 0.018 0.96 10.2 0.9 3 23 412 433 411 433 0.97 7 27 9.5 5.1e+02 1.6 0.4 2 23 461 483 460 483 0.84 8 27 0.00063 0.034 14.8 3.2 1 20 505 524 505 527 0.91 9 27 1.1e-05 0.00059 20.3 0.4 1 23 533 555 533 555 0.98 10 27 0.00012 0.0063 17.1 3.6 1 23 560 582 560 582 0.97 11 27 0.00057 0.031 14.9 3.2 1 21 587 607 587 612 0.94 12 27 0.00057 0.031 14.9 3.2 1 21 617 637 617 642 0.94 13 27 0.00057 0.031 14.9 3.2 1 21 647 667 647 672 0.94 14 27 0.0028 0.15 12.7 2.0 3 21 679 697 679 702 0.94 15 27 0.00057 0.031 14.9 3.2 1 21 707 727 707 732 0.94 16 27 0.00023 0.012 16.2 1.7 1 20 737 756 737 758 0.95 17 27 0.012 0.64 10.8 2.5 1 23 999 1021 999 1021 0.98 18 27 0.08 4.3 8.2 3.6 1 23 1028 1051 1028 1051 0.94 19 27 0.33 18 6.2 0.4 1 23 1055 1077 1055 1077 0.95 20 27 0.001 0.057 14.1 1.5 1 23 1082 1105 1082 1105 0.98 21 27 0.036 1.9 9.3 0.9 2 19 1110 1127 1109 1132 0.89 22 27 0.94 51 4.8 0.1 3 20 1145 1162 1145 1164 0.89 23 27 2.8 1.5e+02 3.3 0.6 2 23 1199 1221 1198 1221 0.94 24 27 0.0002 0.011 16.3 0.3 1 23 1237 1259 1237 1259 0.95 25 27 0.0003 0.017 15.8 0.8 1 23 1265 1287 1265 1287 0.98 26 27 4.3e-05 0.0023 18.4 0.3 1 23 1293 1315 1293 1315 0.92 27 27 0.00082 0.044 14.4 0.3 1 23 1321 1344 1321 1344 0.93
Sequence Information
- Coding Sequence
- ATGAATTTTGTGGCAAAATGTTGTACAGAATGTGCACAGAGGTTAATAAACTGTGACAGATTCAGAGACAAGAGTTTAAGGAGTTATAATCTACTGTTGGATCTATTTGAAAAGAAAGCAGTGATAACAACAGAAGACATAAAAGCAATTGACAGAACAAAACATGAACTGTCATCAAATATAGACAAGAAAATATACAAACCAGACCACTGTGACTCATATTTAATACATAATCAAGTTGAACATATAAAAATTGAATTAGAACTTGATAGTAAATCAAAAATAGAAATATTGAATGATATCAACAGTGATGAAGAGTACCTAGTAGATGATATTGACAATGACACAGAGTTTCTATATGATAACATCAAAATAAAGCATTCAGAGATTCATACAGACAACATTGATAGATTTTTAATCTTTAAAAATGAAAAACCAGATAATATCACAGACAGTGATAATGATGTAGAAATTGTCAATGATTTTGAGAGTAAATTTAATAACACGAACAGCAGTGTCGATGAATTAGTAATTAACGATTCTAACGAAATACAAGCAGTTAAAAACGAAATAACTACTACTGATACGAAAGAACGCAAAGTAGTTGTGAAAAAAGTAAAAGCTGCCCCAAAACCAAAAAAACCGAGAGCAAAAATTAAAAAAACAGTCGGAAGACAAAGGAAACCTGAGAATCAGTGTTATTTAAAATATTTTGAAGTGACCAAGTTGAGTCATGAAGAACAAGTGGCTATGATCCAAAGACGTAAGGAGGCAGATAACTTCAAAAGCTCAGTCTACAAATGTATGACGTGCTACAAAGTGTTTACATGTGTCTCTTCGTATGACAGACATATGGAGAAGCACACTGATGAGTATGGCCCGATCATATGCGGCGTGTGTGGAATACACTGTAGAGCGAGGTTTCGTCTGACGAAACACATTGAAGCCACCCACAGCACCAGGTTCAGTTGCAACGTCTGCGACTTCGTCACTACCGCTGCAAGCACAGCAAAGAGCCACGCGCGCTGGCACGACGGCGTCACGTACAAGTGTGAACAGTGCGATCAGGAGTACAGTAAGAAAACGTCGTACCTGTCCCACTTGCGTATAGCGCACGTATCGGATACGGTGTGCATCCTCTGCGGATACACATTCATCAACAAGAACGGTCTGAGGATGCACTTGGAGAGGAAGCATCGCTCCGAGGATGTGCAGAACCCCTTAGGCCCACTGTGCGAACTGTGCAACTTACGTTTCGCATCCCACGGCGCGTATCGTCAACATCTGAAAGTGTCTCACAATGTACACGGACTCCCGCTGTCGCGAAATGCGAGTTCTGGAATGAAAAAGTGTGCCGCCAGGCAGGACATCCAGACAGTGCAGTGCGAACTGTGTGGCACCAAGCTGAAAGGATTCAAGCTATATGCCTACCACTTCAGCCGGGTCCACCCAGACCAGCAGCCGAGCCAGGAGCCGCCCAACAAGCTACAACAAGCCATTACAGCGAAGCTATTCCTGTGCCACCAGTGCGGGAAGTCCTTTCCTAACACGAATCAGTTGAATCATCACATATGGCGTCACAACGGAGTGAAGCGCTACCAATGTGACACGTGTGACAAGCGATTCGTTGGCAAGATCAACCTGGTGCAGCACATGCAGCTGCACAGTGAGGCTCGACACCGGTGCACCGTCTGCGAGAGGACATTCACACACCCATCCAACGCTAGACGACATTTGTTGCTGCACAGTGAGGCTCGACACCGGTGCACCGTCTGCGAGAGGACATTCACACACCCATCCAACGCTAGACGACATTTGTTGCACATGCAGCTGCACAGTGAGGCTCGACACCGGTGCACCGTCTGCGAGAGGACATTCACACACCCATCCAACGCTAGACGACATTTGTTGCACATGCAGCTGCACAGTGAGGCTCGACACCGGTGCACCGTCTGCGAGAGGACATTCACACACCCATCCAACGCTAGACGACATTTGTTGCACATGCAGCTGCACAGTGAGGCTCGACACTGGTGCACCGTCTGCGAGAGGACATTCACACACCCGTCCAACGCTAGACGACATTTGTTGCACATGCAGCTGCACAGTGAGGCTCGACACCGGTGCACCGTCTGCGAGAGGACATTCACACACCCATCCAACGCTAGACGACATTTGTTGCACATGCAGCTGCACAGTGAGGCTCGACACCGGTGCACCGTCTGCGAGAGGACATTCACACACCCATCCAACGCTAGACGACATTTGTTGTTCTGCTTGATATGCTTAGCAACGGATTGTAAATTGTACCCCATGGGACAGTACAATTTGGGAGAGGCTTACCAACACTTGACTGGAAAATTGTTAACCACACAAGATATATCAACAATTAACAGAGCAACAAACAAACTGACAACAAATCTAAGCGCCAAAGTATTTGAACCTGACCACTGTGACTCACACTATGTACATCATCAAATTGAACACATCAAAATAGAAATTGATTGTGAACCAAAAGTTGATGTTAAACCAAAAATAGAGGCAATAAATGATATTAATAGTGATGATGAGTTCTTAAATGATGATATTGACAACGATACAGATTTTCTATACAATGCACACAAAATAAAACAGTTCAAGATTGATACAAGAAAAATTGAGCGATCTGGCAGCGATAGTGATGTAGAAAGAATAATTGATAAAAAGAATAGAAATGATAGTGAAATAGTAATTGTAGATGCTGCCAAAATAAAGGCAGTCAATGCCAAAAAATCAACGACAAATACGAAAAAACGCAAAGCAGCAATGAAAAAAGAGAAAGCTGCCCCAAAACCGAAAAAACAGAGGACAATAAATGAAAAAGAACGCAAAAAACCAGTTAAATCTGAAAATCAGGACTATTTAAAGTATTTTGTAGTCACAAAGTTGAGTCATGAAGAACAACTGGCTACAATACAGAGCAGGAAAGAGGCAGATAACTTTAAGAATTCTCTGTACAAATGTATGACTTGCTATAAAGGGTTTTCTACTGTTACTACATATAACACACATTTGGAGAAACACAGTGATAAATATGGTCAATTCGTGTGCGAGATATGCGGCGTCCGCTGCAAGAAGAACTGCAAACTACGCGACCACGTGGTCAAGAACCACAGCCAGCGATACAGCTGCAACACATGTCCGCTGGTCACCACGTTTAAAAAGACAGCGCAGAACCACGCTCTGTGGCACGATGGAGTCACGTACAAGTGTGAGCTTTGCAATGAAGAATACAGTAAAAAGACGTCATATCTATCCCACCTGCGTGTCCGTCACCCTACCGACGTAGTGTGTACGCTGTGCGGCTTCTCTTTCGTGAACGCGCGCGGCCTGCGGATGCACTGCAACCTGAAGCATCGCTCCCTCGACACCGCGAGTCCCTCGGGCCCCCTCTGTGAGCCGTGCGACATACGTTTCGTGTCTCACAGCGCGTACAGACAACATTTGGACGTGTCTCCCAAACATAGCAATAGTTCTTTTCTAAAGAGGAACTGCCCTAAGAAGATATACGACAAGCAGTTTACTGTCAAAGCTAAGGATGACACCGACACAGTAGTATGCGAACAGTGCAACATGCAATTCGAAGGGTTCAAGATGTACGCGTCCCACTTCAAGAAGTACCATTCAGACAAGAAGCGCACGCAGTACCCGCAGCACTCCGCGCAGCGGTTCCTGTGCGACCAGTGTGCGAGGTCGTTTAAGAACCTCGCGGCCCTGAAGGAGCACATGCTGATGCACAGCGGGCACAGGAAGTACGAGTGCGCCGTCTGCGGCAAGCGCTTCTACCTCAAGCACTACCTCGCGCTGCACGTCAGGGCGCACGGCGCGGCCGAGCGGTTCCCGTGCGCCGTCTGCGGGAAGAGCTTCGTCAACAAGGCCAACAGGACGCGGCACATGTGGACTCACAGAGACCTGAAACCGTTCGAGTGCGCCGCGTGCGACAAGACGTACGTGAACGCGTCGTCGCTACGCAGCCACGTGCTGCACGCGCACCTCAAGCAGCCATGGCCGAAGAAGAGTCGCGGCCCGCGCGTACCAGCCCGCAGCGCGCCCGACGCCGGCTGTGACAGTACGTGGACTaagGCTGATCGAGGTGACGCGGTGCCGGGGTTTGAAGATGTCATATGA
- Protein Sequence
- MNFVAKCCTECAQRLINCDRFRDKSLRSYNLLLDLFEKKAVITTEDIKAIDRTKHELSSNIDKKIYKPDHCDSYLIHNQVEHIKIELELDSKSKIEILNDINSDEEYLVDDIDNDTEFLYDNIKIKHSEIHTDNIDRFLIFKNEKPDNITDSDNDVEIVNDFESKFNNTNSSVDELVINDSNEIQAVKNEITTTDTKERKVVVKKVKAAPKPKKPRAKIKKTVGRQRKPENQCYLKYFEVTKLSHEEQVAMIQRRKEADNFKSSVYKCMTCYKVFTCVSSYDRHMEKHTDEYGPIICGVCGIHCRARFRLTKHIEATHSTRFSCNVCDFVTTAASTAKSHARWHDGVTYKCEQCDQEYSKKTSYLSHLRIAHVSDTVCILCGYTFINKNGLRMHLERKHRSEDVQNPLGPLCELCNLRFASHGAYRQHLKVSHNVHGLPLSRNASSGMKKCAARQDIQTVQCELCGTKLKGFKLYAYHFSRVHPDQQPSQEPPNKLQQAITAKLFLCHQCGKSFPNTNQLNHHIWRHNGVKRYQCDTCDKRFVGKINLVQHMQLHSEARHRCTVCERTFTHPSNARRHLLLHSEARHRCTVCERTFTHPSNARRHLLHMQLHSEARHRCTVCERTFTHPSNARRHLLHMQLHSEARHRCTVCERTFTHPSNARRHLLHMQLHSEARHWCTVCERTFTHPSNARRHLLHMQLHSEARHRCTVCERTFTHPSNARRHLLHMQLHSEARHRCTVCERTFTHPSNARRHLLFCLICLATDCKLYPMGQYNLGEAYQHLTGKLLTTQDISTINRATNKLTTNLSAKVFEPDHCDSHYVHHQIEHIKIEIDCEPKVDVKPKIEAINDINSDDEFLNDDIDNDTDFLYNAHKIKQFKIDTRKIERSGSDSDVERIIDKKNRNDSEIVIVDAAKIKAVNAKKSTTNTKKRKAAMKKEKAAPKPKKQRTINEKERKKPVKSENQDYLKYFVVTKLSHEEQLATIQSRKEADNFKNSLYKCMTCYKGFSTVTTYNTHLEKHSDKYGQFVCEICGVRCKKNCKLRDHVVKNHSQRYSCNTCPLVTTFKKTAQNHALWHDGVTYKCELCNEEYSKKTSYLSHLRVRHPTDVVCTLCGFSFVNARGLRMHCNLKHRSLDTASPSGPLCEPCDIRFVSHSAYRQHLDVSPKHSNSSFLKRNCPKKIYDKQFTVKAKDDTDTVVCEQCNMQFEGFKMYASHFKKYHSDKKRTQYPQHSAQRFLCDQCARSFKNLAALKEHMLMHSGHRKYECAVCGKRFYLKHYLALHVRAHGAAERFPCAVCGKSFVNKANRTRHMWTHRDLKPFECAACDKTYVNASSLRSHVLHAHLKQPWPKKSRGPRVPARSAPDAGCDSTWTKADRGDAVPGFEDVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -