Bany014634.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bicyclus anynana
Gene Symbol
-
Assembly
GCA_947172395.1
Location
OX359231.1:2130095-2132440[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 4.1e-06 0.00022 21.6 3.2 1 23 6 29 6 29 0.95
2 20 0.076 4.1 8.2 0.2 2 23 35 57 34 57 0.94
3 20 4.1e-06 0.00022 21.7 0.3 2 23 66 88 66 88 0.97
4 20 0.00093 0.051 14.2 0.3 2 23 96 118 95 118 0.94
5 20 2.8e-06 0.00015 22.2 1.8 1 23 125 148 125 148 0.95
6 20 1.5e-05 0.00082 19.9 2.5 2 23 155 177 154 177 0.96
7 20 9.7e-07 5.3e-05 23.6 3.9 1 23 183 206 183 206 0.98
8 20 0.056 3 8.6 0.2 2 23 215 237 214 237 0.94
9 20 5.3e-05 0.0029 18.2 0.2 1 23 248 271 248 271 0.98
10 20 4.8e-06 0.00026 21.4 0.3 1 23 304 327 304 327 0.98
11 20 0.059 3.2 8.6 1.8 2 21 335 354 334 355 0.93
12 20 0.0056 0.3 11.8 1.6 3 23 365 386 364 386 0.96
13 20 0.0017 0.092 13.4 5.4 1 23 406 429 406 429 0.97
14 20 0.00013 0.0071 16.9 2.7 2 23 436 457 435 457 0.98
15 20 0.00013 0.0072 16.9 4.0 2 23 464 486 463 486 0.94
16 20 0.012 0.66 10.7 1.5 1 23 492 515 492 515 0.97
17 20 0.27 15 6.5 8.0 2 23 523 545 523 545 0.95
18 20 0.0017 0.09 13.5 0.3 1 23 552 575 552 575 0.96
19 20 0.1 5.7 7.8 3.2 1 22 582 603 582 605 0.89
20 20 0.001 0.055 14.1 4.3 5 23 619 638 616 638 0.92

Sequence Information

Coding Sequence
ATGTCTGAACCGAACTACATATGCGACTACTGCAGTCGCGTTTTCACAAGGAAGTATAACCTCCAAACACACATTGAGAATTGTCATTTGGATATGTCTTGCTACTGCAATATATGTGACCAAGGTCTGGGGAGCCCCACTGGTCTGATGCTGCATTTAAGCAGAGGCCACAATAGCACCGGTCAACCCTTCCCTGAATGCGACGTTTGTGGAAGGGTATTCTCTAGAAGGCAGAACATAATCTCACATATGAAAACTGTGCATTTGCTGACCAATTCCGCGATTCCCTGCGAAATTTGCAGCAAAATTTTAACCACAGAACGGAATATGAAACGCCATATGAGTCTCATGCACAACCCTGACATCCAATACTTCTCTTGTCATGAATGCCAAAAAGTTTTTAAGCGAAAGGACGCTCTGAGTTCTCACATACAGGCCAATCATGGTGCATCCGATTCTATAAAGTGTGCTTTATGTGACAGAAGTTATAGGAATCACAAGAATTTGAGGAGACACATGGAAATGAGTCACGGGGACAAGGAAGAGTTTAAATGTGAGATTTGCCCGAAAACCTACACATCCAACCAAAGTTTGCGACGCCATATCAAAACTTGCCACTTGAACGAAAATAATGAACAACTGACATGCGAATATTGCTATAAATTGGTATTCGGGAAAGATAATTTGGAGAGCCATATCGCTTCCTACCATTCTCAATCAGCTGTGGATATCAAGTGTGATTTCGTTTGTGATGTATGCAAAATGGTTTTCGAAAACGAGTACTTATTGAGACAGCATGTGAAAACTGTACACAGTTTTCAACAGTTCTACGAATATTGTAGGAGTTCGTTATTAAAAGCTGAGAAAAGGTTGGAGAAGAACAGAAAGAAAAGAGACAATTGTCTACTATTCCAATGCGAGTACTGCCCACAAGTGTACGTAAGCGTTTACGAACTAAAAAATCACATGCGAGTGACGCACGACAAAGATTACTGTCTGTCAACTTGCAATGTCTGTTTCCGAAAATTCTTTAGCAAAGAAACTATAAAGAGACACAAAAAAGTCTGCATACCACCCAAAGACGTCAACAATTGCAGTCACTGCGACAAACTATTCACAGACATCTCCAGTCTCGAATTCCATATACGCATATTCCACCCGCAAGCACAAGTAGCCGATTCCTTCACATCTCATTTGGAGGATTCAGAGCAATCGTACAAATGTATGCACTGCGATAGGGTATACAACAGCGATAGATCACTAAAACATCACATAAAACTGAAACACACCGCAAACGATCCAGTGAAATGTCAGTACTGTGATAAAATTTGCAAAAACAAGTACTATTTGGCCTATCACATAACAACCCACAACAACACATCCTGGTCAAAGTGTGATTATTGCCACAAAGAATTCAAATCCAAAAGGAATATCAGAAGACACATTGAGTACACCCATTTGGGAATGCAAAGATACAAATGCATTGAATGCGAAACACTATTTAAAGAGAAACGGAGCTTGCGCAAACATGTGCGAGTGAAGCATCCGAATTCCCCAGTTTTCCCTCAATGTCATATATGCCACAAACGTTTCGAATCAGCAAAATCTTGCAAAACACATCTAAAACTGCTACATTCCTTCAACATGAACACGCATCCGTGCGATTTATGCTCAGTATCGTTCGATACTCTCGAAGCTTTGAATATACATTTATCAACTAAACATTTAGCGGCAGACGAGATATACAAATGCCAAGAATGTAACCTCATATTCAAAGGTCAAGAGCAATTCGGGAAACACTGCGAGACTTTCCATTCAATAACACCCTCGACTAAAACTGCGCCGCATTGCATAATTTGCTCGAAAGACTTCAGTTCGCGCAAAAATTTGAAACGACATATCAAGAAGTTCCACACAGAATTCAATGCTGATGAGCTAGCAACTTATGGGTCCAGAGGATTTTTGACGATAGACTGTGCTGAATGCATAAGGAGTTTTAATGAAGATTATTACTTCGAGGTTTATCTTGAAGTCAAGCATTCGAGGGAATCTATAGTGTTTACATGCGAATCATGCAATAATTCCTACAATTCTCTGGAGTTCGCCATTCAGAGATACAAGCAAAGTTTCGATGCATCCCAAAGCAAACTGTATATGAGTGAATTGTGTACAACTCAGATGAGTGATAATTCAGATTCTGGTGACGAAATGGAACCACAGAGTACTACTGGTGATCTTAAAGTGGAACCATTTGAAGTGGATTTTGAGGATATGGAACCTGAAAGCACAACATATGATATTAAATTGGAACCTAATGAATATGATGAAATTATGATGATGAAATAA
Protein Sequence
MSEPNYICDYCSRVFTRKYNLQTHIENCHLDMSCYCNICDQGLGSPTGLMLHLSRGHNSTGQPFPECDVCGRVFSRRQNIISHMKTVHLLTNSAIPCEICSKILTTERNMKRHMSLMHNPDIQYFSCHECQKVFKRKDALSSHIQANHGASDSIKCALCDRSYRNHKNLRRHMEMSHGDKEEFKCEICPKTYTSNQSLRRHIKTCHLNENNEQLTCEYCYKLVFGKDNLESHIASYHSQSAVDIKCDFVCDVCKMVFENEYLLRQHVKTVHSFQQFYEYCRSSLLKAEKRLEKNRKKRDNCLLFQCEYCPQVYVSVYELKNHMRVTHDKDYCLSTCNVCFRKFFSKETIKRHKKVCIPPKDVNNCSHCDKLFTDISSLEFHIRIFHPQAQVADSFTSHLEDSEQSYKCMHCDRVYNSDRSLKHHIKLKHTANDPVKCQYCDKICKNKYYLAYHITTHNNTSWSKCDYCHKEFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRVKHPNSPVFPQCHICHKRFESAKSCKTHLKLLHSFNMNTHPCDLCSVSFDTLEALNIHLSTKHLAADEIYKCQECNLIFKGQEQFGKHCETFHSITPSTKTAPHCIICSKDFSSRKNLKRHIKKFHTEFNADELATYGSRGFLTIDCAECIRSFNEDYYFEVYLEVKHSRESIVFTCESCNNSYNSLEFAIQRYKQSFDASQSKLYMSELCTTQMSDNSDSGDEMEPQSTTGDLKVEPFEVDFEDMEPESTTYDIKLEPNEYDEIMMMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01021501;
90% Identity
iTF_00205362;
80% Identity
iTF_00205362;