Basic Information

Gene Symbol
-
Assembly
GCA_947172395.1
Location
OX359231.1:134862-148951[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.0072 0.39 11.4 3.6 1 23 55 77 55 77 0.99
2 41 0.21 11 6.8 2.1 1 23 83 105 83 105 0.96
3 41 0.054 3 8.7 6.1 1 23 111 133 111 133 0.97
4 41 0.00011 0.0057 17.2 3.7 1 23 139 161 139 161 0.98
5 41 4e-05 0.0022 18.5 1.4 1 23 167 189 167 189 0.99
6 41 4.3e-05 0.0023 18.4 1.4 1 23 195 217 195 217 0.98
7 41 5.8e-05 0.0032 18.0 4.7 1 23 223 245 223 245 0.99
8 41 1.5e-05 0.00082 19.9 3.1 1 23 251 273 251 273 0.99
9 41 0.00015 0.0082 16.7 3.5 1 23 279 301 279 301 0.98
10 41 0.0011 0.057 14.1 2.5 1 23 307 329 307 329 0.99
11 41 0.00058 0.031 14.9 0.5 1 23 335 357 335 357 0.99
12 41 0.00011 0.0061 17.1 1.3 1 23 403 425 403 425 0.98
13 41 0.00027 0.014 15.9 0.6 1 23 748 770 748 770 0.99
14 41 0.00041 0.022 15.3 3.3 1 23 776 798 776 798 0.98
15 41 1.7e-05 0.00094 19.7 4.3 1 23 804 826 804 826 0.99
16 41 0.039 2.1 9.1 1.2 1 23 832 854 832 854 0.99
17 41 0.0006 0.033 14.8 2.6 1 23 859 881 859 881 0.95
18 41 0.053 2.9 8.7 5.0 1 23 887 909 887 909 0.98
19 41 1.3e-06 7.3e-05 23.2 1.6 1 23 915 937 915 937 0.99
20 41 2.2e-05 0.0012 19.4 2.1 1 23 943 965 943 965 0.98
21 41 0.00076 0.041 14.5 3.4 1 23 971 993 971 993 0.99
22 41 2.5e-05 0.0014 19.2 3.1 1 23 999 1021 999 1021 0.98
23 41 0.047 2.6 8.9 4.4 1 23 1027 1049 1027 1049 0.96
24 41 0.0022 0.12 13.1 1.0 1 23 1055 1078 1055 1078 0.97
25 41 0.031 1.7 9.4 7.2 3 23 1086 1106 1084 1106 0.95
26 41 0.00054 0.029 15.0 1.5 1 23 1112 1134 1112 1134 0.97
27 41 5.7e-05 0.0031 18.1 1.1 1 23 1140 1162 1140 1162 0.99
28 41 4.7e-06 0.00025 21.5 1.0 1 23 1168 1190 1168 1190 0.98
29 41 1.5e-06 8.2e-05 23.0 4.6 1 23 1196 1218 1196 1218 0.99
30 41 6.7e-05 0.0036 17.8 0.3 1 23 1224 1246 1224 1246 0.98
31 41 0.0018 0.099 13.3 5.2 1 23 1252 1274 1252 1274 0.98
32 41 7.1e-05 0.0038 17.8 5.2 1 23 1280 1302 1280 1302 0.99
33 41 0.011 0.57 10.9 2.0 1 23 1308 1330 1308 1330 0.98
34 41 0.081 4.4 8.1 6.1 1 23 1336 1358 1336 1358 0.98
35 41 0.084 4.6 8.1 2.1 2 23 1365 1386 1364 1386 0.97
36 41 1.5e-06 8.4e-05 23.0 1.0 1 23 1392 1414 1392 1414 0.98
37 41 3.4e-05 0.0019 18.7 1.3 1 23 1420 1442 1420 1442 0.99
38 41 0.00056 0.03 14.9 8.0 1 23 1448 1470 1448 1470 0.99
39 41 0.00016 0.0087 16.6 3.5 1 23 1476 1498 1476 1498 0.99
40 41 0.00029 0.016 15.8 0.9 1 23 1504 1526 1504 1526 0.97
41 41 0.0025 0.14 12.9 1.0 1 23 1531 1554 1531 1554 0.93

Sequence Information

Coding Sequence
ATGGAAAATCAAGAACTAGAAAACTCTTTCATAGCAAGCAATTTGTATGTGAGTATGGAACATGCCGAGCAAATGGAAACTGTAAGCGCCGGCTGCACTCTGGACGAGAACTACATAGAGTCGTGTGAAACTTATGACGACTCAAGCAATGGCAAGAAGTACTACTCGTGCCCGCGGTGCCGCTACCGCTGCCCCAAGCGGAGCAACTTCGTCCTGCACGTGCGCACGCACACCGGGGAGAAGCCCTTCGCCTGCTCCGCGTGCGACTACAGATGTCTCAGCAAGTCTCGTCTGGCGCGACACATGAACTCTCACACTGGCACCAAGCCCTTCGCGTGCCTGCACTGCCACTTCAAGTGTACGCTCAAGAACAATCTCATCGTGCACATGAGAGCCCACACTGGGGAAAAGCCGTTTTCCTGCACCGAATGTGAATACAAATGTACACAGAGCAGCACTCTCGTCACACACATGAGATCCCATACTGGTGAACGACCATATGTGTGTACCATTTGTGATTATAAGAGTTCGTATAGAAGCCATTTGATCGGACACATGAGGATTCATTCTGGGGAGAAGCCGTTTAAATGTGACACATGCGACTACACATGTGCACAGCGCAGCGCGCTCACCGTGCACATGCTTCTGCACAGCGATGAGAAGAAATACACGTGCACTTACTGCGGATATAAATGTAAACGCAAGTCAGAGATCAACACACACATAAGAAGTCACACTGGCGAAAAGCCGTACATGTGCAAGATATGTAACTTATCTTGTACGAGGAGTAACACTTTGGCCAATCATATGAGAACTCATTCTGCTGATAAGCCGTTCAGCTGTGAACACTGCGATTACAAATGTATACAAAGAGGGAGTTTGGTCAATCATATGAGGATACACACGGGGGAAAAACCCTATCAGTGTAGTGTGTGTGTGTTCAAATGTGCCCGAGCGTTTAATTTAGTCACACACATGAGAAAGCACACTGGTGAGAAACCATACAAATGCAGCATATGTGATTATAGAAGTGCGGCGAAGGCTCGTTTGAACAGACACATGAAGATTCACACAAAATCTGATTGCAGCGATAAACCTAAGAAAAGTAAAACAGTGAATCGTGCCAAATTGGACAGTAGTGTAGTGAACAAACACATGAGAACCCACAGTGCAGGCCGAACCGATTTGGATGAAACCGATCAGAAATACATTTGCAATGTGTGTAACACTAAATGTCCAGATGCCTACAGCTTGAATCAACACATGAGTACTCACGAAGCCCCGCCCGAGCCGCAGTTTATTGCCATCAAACAGGAGTTTGATGCATCAGAAGTGGGATACGATGACTGCGATGCTCTGAGCGTGCCGGTGGCAGTCAAGCGCGAGCAGGACTCGGACATGTTGAGTGTAGAACTGACTCCAGTGATAACTATTGACACATGTCGACTTCCCTCCAGCCGCGACATCCGTGCAGCCTGGCTTCACGCACTGGGGCGACCGTCGCACGTGCCGCACGCTGCGGTAGTCTGCTCACAGCACTTCCTGCGCGAGGACTTCTGCACAACCAGAAGTGGGTTGCAAATACGACCAGAGGCAATTCCATTTGTGACAAACATGGCACTTACAGAGCCAAATGAGGGCAAAGAAGGACAAGACTTAAAAACTGCTGTTGAAGATCAAATAAAGAATAGAGAAAATATTATAGTACAATTAGCAAGGATTCCATCTGAATCAACGCCAAATGAAGACAAACTAGAAATTGACATAAAAGTTACTGATTCTACAAAAAATGAAATAGAGAATGGCTCACATGAAGTACAACCAAAAACAGATGTTACTTTTGTTGAAGTGAAAGATGATAAAGTACAATTAGACATTAACAATGGAATGGGATCTGTTGAAATTGAAATAGATGTAACAAGCAAGTCAGTTGATGAATCTGAACATAAGCCATCTCAACATGCAGAAGTACATAGTGACAATCAATTATTAAACTTAGCATTAAGTAGAGAAACTACCGATGATACTTTAGATATTAGACAGCAAAGTGATTTAGTTAGAAAAGAACTGGTTGTTGAGTTAGAGAAAATTAATATAACAAAATACTTACAATCGATGAATTTGACAGCAATAAATAAGCTAAAGCAAACTGATTGTAATTCTAAAAAATCAGTTTTGAAACGTGTTGAACACAAAAAAACACAAGTAAAACGCATTAGAAACAAAAAAGGGTACAAAATATACAAATGTGATGTATGCAGTTACAAAGTGAACGATAAATATAGTTGGACTATCCACATGAGAATTCACACTGGTGAAAAGCCGTTTTCGTGCAATCTCTGCGAATACAAATGTACTAATGCAACCTCTTTGAAATCTCACATGAAAGTGCACACGGAAGAGAGAAACTTTACATGTCAATTGTGCAAAAAAAGCTTCAAACACAGATCTGCTGTAGTTACCCACATGAGAACACACACTGGTGAAAAGCGTTATCAATGTAAACTATGTGAATTTAAAAGTGGAAGCTCATCCGGTATATATAACCACATGAAAACTCACACTGACAGTAAATACTCGTGCATTACGTGTCCTTCTAAATTTAAAAACAAAACGTCATTGAAAAACCATATGAGAACTCACACTGGCGAGAAACCATTTCACTGTGCTCATTGTGATCACAAAACTGCAATCAAATATAGTCTAGTTAACCATATGAGGATCCACACTGGCGAAAAGCCGTACGTTTGCAAGATTTGTCAGTACAAGTTCTCAACAAACAGTAGCCTTTATTTGCACATGCGTATTCACAACAATGAAAGGGCGTTCGTGTGCGAGTTCTGTCACTCGCAGTTTTCGAGAAAGAGCGCTCTCAATATCCACATGAGAGTACACAACGGTGTGAAGCCATATTCCTGTAAGTTTTGCGATTATAAATCTACCACCAGTAACAGTATGAGACTCCACATGAGAACTCACACTGGTGAAAAACCTTATTCCTGTAATGAATGCAATTACAAATGTTCGACTAATTCTTCCTTGAGAGTTCACATGGTTACCCACAGTGAGGATAAACCACATTTCTGTAAGCTTTGCAACTTTAGATGTGCTCTAAAGGGTCCTTTAAAAGCTCACATGAGAACCCATTCTGGAGAGAGACCATACGCCTGTAACTCTTGTCCATATAGATGTTCTGTGAAAGATGCTTTGCGGTTACACATACAGACTAACCACGGGGGAGAAAAGACAATTTGCTGTCAATATTGTAAGTACAAATGCTTTCGCGAGACGACTTTGAAAATTCACATGAGAACTCACACTGGAGAGAAGCCTTTCGCGTGCGCGCAGTGCGAATACAGATGCTCTACAGCGCAAGGGTTAAAAAGACACATGCTGACACACACAAAATTGAAACCTTACACTTGCAGCGTGTGCAATTATAGTATGAGTTCTCTGCCATCTTTAAAGAGGCACATGAGGACCCACACTGGACAGAGACCGTACTCATGTGACGTGTGCGAACGGTCATTTACAACAAGTGACGGTCTATCGAGACACAAGAGGTCGCACACTGGCGAACGACCCTTCAAGTGCAGTGTTTGCGATAGAAGCTTTACCGACAGATCCGGTCTGTGCAGACACAAGAGAACACACACGAAAGAGAAACCCTTTCCATGCAAGTATTGCCAGCGTCCGTTCGCTGAGCGCGGAACTCTAACTGTCCACGAAAGAACTCACACTGGAGAGAAGCCATTCTCTTGCAAGCTATGTGATTACAAATGTAATACTTCGTCTGCACTAAAGACTCACTCCAGGAAACACACTGGGGAGAAGCCTTACTCGTGCAAAGACTGCGACTACAAATGTGCTAGTTCTTGCAGTCTAACAGCTCACATGAGAACTCACACTGGCGAGATGCCTTATTCATGCGACATCTGTCAATTTAAATGCGCTACATCCTCTGGTATCGCTCGACACAAAAGATCTCACAATGGGGAGAAACGTTACCACTGTGATTACTGTGAATTCAGAAGCACCGAAAAACACAACGTGAAGATGCACATGAGAAGCCACACTGCGGACAAATACATGAGCTGCGATCACTGCAATTTTAAATCGCCTTACAAGAATTCCATAATTCTACACATGAGAACCCACACTGGCGAAAAACCATTCTCCTGTAACCTCTGCGGACGCAAATTTGCAAATTCTACTGGTCTACGAGACCACATGAGGAGGCACACTGGTGAAAAACCCTATTCTTGCCCACGCTGCGATTACAAGAGTGCGACTTCGACGTTACTGAAAACACACATGAGAACTCATACTGGAGAAAAACCATATTCTTGTCATCATTGTTCTTATCAATGCATCTCTGCGAGTTCTCTGAAAACCCACATGAGAACTCACACTGGTGAGAAACCTTATTCGTGCAATGACTGTGATTATAAATGTTCTACGACGAGTTCTCTAGTCCTTCACACTAGGACACACACTGGAGAGAGGCCGTTTGCCTGCACGCTGTGTGACTACAGAGGCAAGACGTCTAGCACCTTGACGGGCCACATGAGGAGGCACACCGGGAAAGCATTCACTTGTGATATTTGTAAACTTAAGTTCAGAAATAAACAGTCGATAAGATCACACATTACAGATGCTCACACGTTCGTCGGACAATCTCAGTCGTAA
Protein Sequence
MENQELENSFIASNLYVSMEHAEQMETVSAGCTLDENYIESCETYDDSSNGKKYYSCPRCRYRCPKRSNFVLHVRTHTGEKPFACSACDYRCLSKSRLARHMNSHTGTKPFACLHCHFKCTLKNNLIVHMRAHTGEKPFSCTECEYKCTQSSTLVTHMRSHTGERPYVCTICDYKSSYRSHLIGHMRIHSGEKPFKCDTCDYTCAQRSALTVHMLLHSDEKKYTCTYCGYKCKRKSEINTHIRSHTGEKPYMCKICNLSCTRSNTLANHMRTHSADKPFSCEHCDYKCIQRGSLVNHMRIHTGEKPYQCSVCVFKCARAFNLVTHMRKHTGEKPYKCSICDYRSAAKARLNRHMKIHTKSDCSDKPKKSKTVNRAKLDSSVVNKHMRTHSAGRTDLDETDQKYICNVCNTKCPDAYSLNQHMSTHEAPPEPQFIAIKQEFDASEVGYDDCDALSVPVAVKREQDSDMLSVELTPVITIDTCRLPSSRDIRAAWLHALGRPSHVPHAAVVCSQHFLREDFCTTRSGLQIRPEAIPFVTNMALTEPNEGKEGQDLKTAVEDQIKNRENIIVQLARIPSESTPNEDKLEIDIKVTDSTKNEIENGSHEVQPKTDVTFVEVKDDKVQLDINNGMGSVEIEIDVTSKSVDESEHKPSQHAEVHSDNQLLNLALSRETTDDTLDIRQQSDLVRKELVVELEKINITKYLQSMNLTAINKLKQTDCNSKKSVLKRVEHKKTQVKRIRNKKGYKIYKCDVCSYKVNDKYSWTIHMRIHTGEKPFSCNLCEYKCTNATSLKSHMKVHTEERNFTCQLCKKSFKHRSAVVTHMRTHTGEKRYQCKLCEFKSGSSSGIYNHMKTHTDSKYSCITCPSKFKNKTSLKNHMRTHTGEKPFHCAHCDHKTAIKYSLVNHMRIHTGEKPYVCKICQYKFSTNSSLYLHMRIHNNERAFVCEFCHSQFSRKSALNIHMRVHNGVKPYSCKFCDYKSTTSNSMRLHMRTHTGEKPYSCNECNYKCSTNSSLRVHMVTHSEDKPHFCKLCNFRCALKGPLKAHMRTHSGERPYACNSCPYRCSVKDALRLHIQTNHGGEKTICCQYCKYKCFRETTLKIHMRTHTGEKPFACAQCEYRCSTAQGLKRHMLTHTKLKPYTCSVCNYSMSSLPSLKRHMRTHTGQRPYSCDVCERSFTTSDGLSRHKRSHTGERPFKCSVCDRSFTDRSGLCRHKRTHTKEKPFPCKYCQRPFAERGTLTVHERTHTGEKPFSCKLCDYKCNTSSALKTHSRKHTGEKPYSCKDCDYKCASSCSLTAHMRTHTGEMPYSCDICQFKCATSSGIARHKRSHNGEKRYHCDYCEFRSTEKHNVKMHMRSHTADKYMSCDHCNFKSPYKNSIILHMRTHTGEKPFSCNLCGRKFANSTGLRDHMRRHTGEKPYSCPRCDYKSATSTLLKTHMRTHTGEKPYSCHHCSYQCISASSLKTHMRTHTGEKPYSCNDCDYKCSTTSSLVLHTRTHTGERPFACTLCDYRGKTSSTLTGHMRRHTGKAFTCDICKLKFRNKQSIRSHITDAHTFVGQSQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-