Bany004851.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bicyclus anynana
Gene Symbol
Cpa4
Assembly
GCA_947172395.1
Location
OX359209.1:9153073-9173086[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-08 1.5e-05 24.8 0.1 4 39 683 718 680 722 0.92

Sequence Information

Coding Sequence
ATGGCGCGTCGCCTGGCGCTGCTGCTCTTGCTCTGTGCGGCGGCTGTTCCCCGCCCGCACTCGCGCCCTACCCGCACCGACACCTCCGACTCGGATTCCTCCGACCCTTTCGCCCTCTGGGACTACGAATCCGATGAAAACACGCCGCAGCCGCGACCGGTAAAACCTAATGCCAAAGTGTTACTCCGAAGTAAAGTTCCGAAATCGAATGTGACAAAAAAGACTACTAAAAGTGATGATAAAGTTATAAAAACTACTATCAATATTGAGAGCCATACGAACATTTATGTGACGAAATTGCCACCGTTAATGGAAACGTTCGCCGGTTCTTTTACGCGTGTTCCTCAGGGGATGTATGTAAATGGTAACGAGCAGGCCTGGGTGAATGTTGGGAGTCAGGTTTCGAGGATCAGTACAAAGAAACCGGCGAAACCTCGACCATCGACCACGAGACGCCCGCCCACGAGTTTAAGACCTCGCACCACGACGCGGAGGCAACGCGCAACCACTACTAGGCGCTCCACGACGCGGGCGGTACGAACAACACCAAAACAAGCAAATAAACAAACAACCAAAGTGCCAAAAAAAAAAGTGACTTGCTCACAAAATAAACCAGGGTGGATCTCGAACTTTTTTCAAGATAATAAAATAAAGAAATCAGCCAAAAAGCAGGAAAGAACAGGTATATTCTCCAGACTCTATAATTGGTTAGTTGGATCGAAAAACTCATGGTTCGGCAACGGGTGGTTCGACGAGGAAAGAGAGCAAGTAACAACGAAGACTACTACTCCCATTCCTGTCGCGACGGCTGATGACAATTGGTTCCCAGCGTTTCTTGACACCGAAGATGTTGACGACAtaaatacgacaagcgaaacaaTTAAAAAATCTGCGAAGAAATCAATAAAAAAGAACTATAAAGGCTATCAACTTGTACGAGCATATCCAGACGTACAGTGGAAAGTGCGCTCGCTATTGGATCTGCGGGAAGAAGCCGAGGGCTCGGGTTTGATGTGGTGGACCGCCCCATCTCTCAACAGTTCTACGGATCTGCTTGTTCCGCCAGACTTACTAGTGGATGTCAAGGACCATTTGAAATCTTATAGAATAGACTTTGATGTGGTTATTTGGGATTTGCAGAAAGCAATAGCGTATGAGAATCCTAAATTATCAAAGAAGCAGAGAATAGAACTTGAACACATGCATGGGCATCCATTGACATGGAGGCGCTACCATCGATATGCCGACATACTGAGGTATCTGGAATACCTGCAGCTCTCATATGCCGATATTGTTGAACTAGTGCCCCTGGGCCGGACTTCGGAAGGACTTCCCTTAGTAGCAGTAAAGGTATCAATTCCATCGAATGAAACTCAATCTCGAAGTTCAATAAGTCAAGGTCAGAAGAAGAAGTGGAAGCTCCGGTCCCACCTGAAGCCCGCCGTGTGGTTGGAGGGCGGGGCTCACGCGCAGGAGTGGATCACCCCTGCTGTCGCCACGTGGATATTACACTATTTGGTCGAAGGGGATAAGGGCTTAGGCGCAGATCGCGAAGTCCTCCGCGAGGCTGATTTCTACATAATGCCAGTGCTGAACCCGGACGGTTACGAGCATTCGCACACCCACGACCGGCTGTGGAGGAAAACCCGTTCGCGTAGCCCGGACCACTCCGACGATTACTACGTCGGCTGGTTTCCCTGGAACTGGGGTCGCACAGAGTGCGTGGGTGTGGATACGGACCGCAACTGGGATTACCACTGGGGCGAGAAGGACTCCTCGAGCGACCCCTGCGCTGACAACTACGCAGGCCCGCATCCCTTTAGTGAGCCGGAGACGCGGGCAGTCTCCGAATTCTTAGCGGAACATAGAGGAGAAATAAAGCAAGCGGCCCGTGCCGCGAACGTGTTGGATCCTGCAGCCGAAAACTACCACGACGCGGAGTGCACGCGTGTTTTTATAAAATTCTGGCAAAATAAATATAACATCATGAAAAACAGATCACCACATTCTACCATACGAAAAAAAAGGGCTCAATGGACTTCGCAACAAATGGAAAGCGCTGTTAAAATGGTAGAAAAGGGTATATTGTCTACATATACTGCTGCAGCCAGATACAACATCCCAAGAAGAACCCTACGCAACCATCTAAAGAGCGGTTCGACTATACGAAAGCTAGGTCGGTCGGCCATATTGAATACAGAACAAGAAGCTGGACTTGTCAGAAGAATCATACGTTTGGCTGATGTTGGAGTGCCGATGACGCCAAAGATGCTGCGCGTACAGGCGTTTTCGTTCTGTAAAATTAAGAAAATTCCAAACACCTTCAATGATGCCAAAAATGCCGCGGGGAAGAAATGGTTGAGGTTATTTCTAAAACGACACCCTGAATTAGCGCGTCGTAAAGCACAGATGATGAATCCAGCTCGAGCTCAAAAATTAAATAAATATATTGTTAGCGATCACTTTTCCAAATACAAAAGCGTGCTGGATAGACTTGGAATTGAACATAAACCTGAAAGCATTTACAACATCGATGAAAAAAATTGTCGCATATCCTTACACCATCAGCAGGAAGTTCTGACAGCCAAAGGGAAAAAGAGAGTTCATCAAATAGCAAATGAGCATGCTGAAAGTGTGACTGTGGTAGGCTGCGGAAATGCTATAGGATCAGCAATTCCGCCAATGATACTGTTCAAAGGCAAGAGATTAAAGCCAGAATTCCAAGATAACTTACCTCCAGGCTCTCTCGTGAAGATGACGCCAAAAGGAAGTATGACGACGGAAACATTCATAGAGTTTATTAATCATTTGAATAAATACAGAACATCAGGGCCATGTCTCCTCATATTTGACGGTGCAAAATGCCATCTGGACTTTTCTATTGTAGAGGAAGCTGAGAAATGTGGCATTACTTTATATTGTCTTCCGTCAAATACCACGCACGAATTACAGCCCATGGATAAGTCTGTTTATCGTTCCTTTGAGCACCATTGGGACCAAGAGTTGATTAAATATATCAATCAGCATCCCGAACGAACTCTTAACAAGACAAGCTTCAATGTAATTCTCTCACAAGTATGGCCAAAATGTATGACTATTTCCAATATCTCGAATGGGTTCCGCTCTACAGGGTTGTATCCATATAACCCAGATGCTATTCCTGAAGAAGCTTTTGCGCCCTCTGCGTTGTCAGAGCTTCCTAAGCCTATGCATAGTGAGAATATTGCTGCAGGCTTATCTGATCAATCTGCAAAACAAGATATTTCAAGCGCAAATGTGGAAGATTTGGATGGGTCAGCCACAGATACTGAGAATTTGCCACTGTCCTTGTTCTCAAAAATCAAACCGAATGATGGAACTCCGCATAAAATAGATAATAATCAATCAACCACGCGTGAGATTCATGATTTTTTACCAACCCCCAAGTTTAAAGATAAAACAACTGCTCCACGCAAGAAGTCTCTAAATTACAGAGCTCAAGAGGTAACAAAAGATTTGTTTGGTGGTGACGATGCTACGTCCACATCACAGATTACTGTACCATCGTCAAACGAAGATGTTCCTGGTACTTCATCCATGATAATAATTAGCAGAAAGACACCAAATTCAGCATCAGTTACTGACTGTACCCTCTCAGTACAGACTGCTTCCTTGACAGCAGATAAGCTTAAGGGATCTAAACCAAAACATCACGACAATGCTCCTTCTTGGTACTGTCCAGCTTGTGACGAAGATCGAGTTGAAGATATGCGACAATGTCCTACTTGTGGCGTTTATGTATCCATGCACGCGTACTCACAAGCGTGGCTGCTGCCGAGTTCTCACTCGCACGCGTCTTTCGCTGATGACGGAGTGCTGATGGAGATGGGCAAGCTCGCCACCGCCGCCCTCGCGGACATGTACGGAACCAAGTACCAGGTTGGAACGGCGGCAGAAATCCGACAACCAGCTACAGGAATGTCCCACGACTGGGCAAAGGCCCGCGCCGGCATCAAGTTCTCCTACCACGTGGATCTGCGAGATTCCTTCGGACCCTATGGGTTCCTACTACCCGGCTCACAGATAGTATCCACGGCGCGTGAAACTTGGCAGGCTGTTAGAGCAATTGTAGATAATTTATCACCTGGGTTTAAATAA
Protein Sequence
MARRLALLLLLCAAAVPRPHSRPTRTDTSDSDSSDPFALWDYESDENTPQPRPVKPNAKVLLRSKVPKSNVTKKTTKSDDKVIKTTINIESHTNIYVTKLPPLMETFAGSFTRVPQGMYVNGNEQAWVNVGSQVSRISTKKPAKPRPSTTRRPPTSLRPRTTTRRQRATTTRRSTTRAVRTTPKQANKQTTKVPKKKVTCSQNKPGWISNFFQDNKIKKSAKKQERTGIFSRLYNWLVGSKNSWFGNGWFDEEREQVTTKTTTPIPVATADDNWFPAFLDTEDVDDINTTSETIKKSAKKSIKKNYKGYQLVRAYPDVQWKVRSLLDLREEAEGSGLMWWTAPSLNSSTDLLVPPDLLVDVKDHLKSYRIDFDVVIWDLQKAIAYENPKLSKKQRIELEHMHGHPLTWRRYHRYADILRYLEYLQLSYADIVELVPLGRTSEGLPLVAVKVSIPSNETQSRSSISQGQKKKWKLRSHLKPAVWLEGGAHAQEWITPAVATWILHYLVEGDKGLGADREVLREADFYIMPVLNPDGYEHSHTHDRLWRKTRSRSPDHSDDYYVGWFPWNWGRTECVGVDTDRNWDYHWGEKDSSSDPCADNYAGPHPFSEPETRAVSEFLAEHRGEIKQAARAANVLDPAAENYHDAECTRVFIKFWQNKYNIMKNRSPHSTIRKKRAQWTSQQMESAVKMVEKGILSTYTAAARYNIPRRTLRNHLKSGSTIRKLGRSAILNTEQEAGLVRRIIRLADVGVPMTPKMLRVQAFSFCKIKKIPNTFNDAKNAAGKKWLRLFLKRHPELARRKAQMMNPARAQKLNKYIVSDHFSKYKSVLDRLGIEHKPESIYNIDEKNCRISLHHQQEVLTAKGKKRVHQIANEHAESVTVVGCGNAIGSAIPPMILFKGKRLKPEFQDNLPPGSLVKMTPKGSMTTETFIEFINHLNKYRTSGPCLLIFDGAKCHLDFSIVEEAEKCGITLYCLPSNTTHELQPMDKSVYRSFEHHWDQELIKYINQHPERTLNKTSFNVILSQVWPKCMTISNISNGFRSTGLYPYNPDAIPEEAFAPSALSELPKPMHSENIAAGLSDQSAKQDISSANVEDLDGSATDTENLPLSLFSKIKPNDGTPHKIDNNQSTTREIHDFLPTPKFKDKTTAPRKKSLNYRAQEVTKDLFGGDDATSTSQITVPSSNEDVPGTSSMIIISRKTPNSASVTDCTLSVQTASLTADKLKGSKPKHHDNAPSWYCPACDEDRVEDMRQCPTCGVYVSMHAYSQAWLLPSSHSHASFADDGVLMEMGKLATAALADMYGTKYQVGTAAEIRQPATGMSHDWAKARAGIKFSYHVDLRDSFGPYGFLLPGSQIVSTARETWQAVRAIVDNLSPGFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-