Bany009221.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359206.1:328594-336514[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.23 1.5e+02 2.3 0.0 24 34 45 55 44 59 0.87 2 25 0.24 1.6e+02 2.2 0.0 24 34 62 72 61 75 0.87 3 25 0.2 1.4e+02 2.5 0.0 24 34 75 85 74 88 0.87 4 25 0.23 1.5e+02 2.3 0.0 24 34 92 102 91 106 0.87 5 25 0.24 1.6e+02 2.2 0.0 24 34 109 119 108 122 0.87 6 25 0.22 1.5e+02 2.4 0.0 24 34 122 132 120 134 0.88 7 25 0.19 1.3e+02 2.6 0.0 24 34 135 145 133 149 0.88 8 25 0.2 1.4e+02 2.5 0.0 24 34 148 158 147 161 0.87 9 25 0.23 1.5e+02 2.3 0.0 24 34 165 175 164 179 0.87 10 25 0.24 1.6e+02 2.2 0.0 24 34 182 192 181 195 0.87 11 25 0.17 1.1e+02 2.7 0.0 24 34 195 205 193 212 0.88 12 25 6.9 4.6e+03 -2.4 0.0 24 34 212 222 211 224 0.84 13 25 0.23 1.5e+02 2.3 0.0 24 34 229 239 228 243 0.87 14 25 0.24 1.6e+02 2.3 0.0 24 34 246 256 245 259 0.87 15 25 0.24 1.6e+02 2.3 0.0 24 34 263 273 262 276 0.87 16 25 0.24 1.6e+02 2.3 0.0 24 34 280 290 279 293 0.87 17 25 0.24 1.6e+02 2.3 0.0 24 34 297 307 296 310 0.87 18 25 0.24 1.6e+02 2.3 0.0 24 34 314 324 313 327 0.87 19 25 0.23 1.5e+02 2.3 0.0 24 34 331 341 330 345 0.87 20 25 0.27 1.8e+02 2.1 0.0 24 34 348 358 347 360 0.88 21 25 0.19 1.3e+02 2.6 0.0 24 34 361 371 359 375 0.88 22 25 0.27 1.8e+02 2.1 0.0 24 34 378 388 377 390 0.88 23 25 0.19 1.3e+02 2.6 0.0 24 34 391 401 389 405 0.88 24 25 0.24 1.6e+02 2.2 0.0 24 34 408 418 407 421 0.87 25 25 0.22 1.5e+02 2.4 0.0 24 34 421 431 419 433 0.88
Sequence Information
- Coding Sequence
- ATGAGCTCGCGAACAGAACAGCAAACAGATATTAGAGGATTACCCGCCACGCGCGCGCCGCCGCCCGCCGCCGAACGCCACGCCACGCGCGGGACGAATTATCACAATATGCTGCAATTGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAAATACCCGGGAAACTCTATTACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAACTCTATAACATACCCACTGATACGCTCTCTCCGCAGAAAATACCCGGGAAACTCTATAACATACCCACTGATACGCTCTCGCCGCAGAAACTCTATAACATACCCACTGACACGCTCTCGCCGCAGTGA
- Protein Sequence
- MSSRTEQQTDIRGLPATRAPPPAAERHATRGTNYHNMLQLKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKLYNIPTDTLSPQKLYNIPTDTLSPQKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKLYNIPTDTLSPQKIPGKLYYIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKLYNIPTDTLSPQKIPGKLYNIPTDTLSPQKLYNIPTDTLSPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -