Basic Information

Gene Symbol
kn
Assembly
GCA_947172395.1
Location
OX359217.1:8365448-8380926[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-141 8.7e-138 460.3 0.0 179 387 23 249 19 252 0.98
2 3 8.2e-07 0.0055 15.2 7.8 420 495 258 341 250 427 0.69
3 3 0.051 3.5e+02 -0.6 1.3 448 555 386 499 371 508 0.66

Sequence Information

Coding Sequence
ATGTGGGTTACATCAGCTCTCAATATATTCCCATCTGTTGGCACAGCAATATTCGGCATGGCGGCAATCCTGGTGCCGTTTTTTCTCAAATTCTTTTTGAAATGCAACCAGAACTGTTTGAAGAACGCCGGCAACCCGAGAGATATGAGAAGGTTTCAAGTGGTGATATCGACGCAAGTGATGGTGGACGGCCCCCTGCTGGCCATATCCGACAACATGTTCGTCCACAACAACAGCAAGCATGGCCGGCGCGCCAAACGCCTCGACCCCACTGAAGGTACTGACGCCGCGCCCGACACACATTCGGGGCTCTACCCACCGTTGCCCGTGGCAACGCCATGCATCAAAGCAATATCTCCGAGCGAAGGCTGGACGTCAGGGGGCTCCACTGTAATAATAGTGGGGGACAACTTTTTCGATGGACTCCAAGTCGTATTCGGAACTATGTTGGTATGGAGTGAGCTGATAACATCTCACGCGATAAGAGTGCAGACGCCGCCGCGCCACATCCCCGGCGTGGTGGAGGTGACGCTGTCGTACAAGAGCAAGCAGTTCTGTAAGGGCGCGCCCGGGAGATTTGTATATGTTTCAGCGCTGAACGAGCCCACGATAGATTACGGCTTCCAGCGGCTCCAGAAGCTCATACCGCGGCATCCGGGCGATCCGGAAAAACTACCAAAGGAAATAATACTCAAACGCGCGGCAGATCTGGCAGAAGCACTCTACTCGATGCCCAGAAACAATCAGCTAGGTCTGGGCGCGCCGCGGTCTCCGCCCGCCAGCATGCCGTTCAACTCCTACACGGGGCAGTTGGCAGTCAGCGTGCAAGACACGGCCGCGTCGCAGTGGCCTGAAGAGGAGTACGCGCGCAGTGGCGGCTCGGTCTCCCCGCGGTACTGCTCGGCCGCGTCCACACCGCACGCGCCCGCCGCCTACCCGCCGCAGCACTACCCCGCGCCGCCTACCTCGCTATTCAACACCACGTCACGTAAGTTACATCAACTGCACGTCGATCAACTACCGTTAGAGTGCGCGCGCAGTGGCGGCTCGGTCTCCCCGCGGTACTGCTCGGCCGCGTCTACACCGCACGCACGCGCCCGCCGCCTACCCGCCGCAGCACTACCCCGCGCCGCCTACCTCGCTGTTCAACACCACTGCGTGCGTATTGGCATCTCGGTCTCCCCGCGGTACTGCTCGGCCGCGTCTACAACGCACGCACCCACCGCCTACCCGCCGCAGCACTACCCCGCGCCGCCTACCTCGCTGTTCAACACCACGTCACTGTCTCTAGGACCGTACCATCCGGCCAACATGAACGGACCCTTACCGTCCGACCATCAGTATAACTTGTATAATGCGAAAGATAGCGAGCATTACAGTGAAAGAAACGGGGACGCTAAAAGCGACTGTCCAGCAAACACTCATATAAAATGCAACGATATGAAAGGGCTCAGTAAAGAGGCCAAGACCAGAAGCGCGTTTGCCGCAGTCAGACAAACTCCGTCGCGTTTCCAACAACATCAGAATTGGCACCATCTCGCCGTTCAGTGTTAG
Protein Sequence
MWVTSALNIFPSVGTAIFGMAAILVPFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPDTHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWPEEEYARSGGSVSPRYCSAASTPHAPAAYPPQHYPAPPTSLFNTTSRKLHQLHVDQLPLECARSGGSVSPRYCSAASTPHARARRLPAAALPRAAYLAVQHHCVRIGISVSPRYCSAASTTHAPTAYPPQHYPAPPTSLFNTTSLSLGPYHPANMNGPLPSDHQYNLYNAKDSEHYSERNGDAKSDCPANTHIKCNDMKGLSKEAKTRSAFAAVRQTPSRFQQHQNWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-