Basic Information

Gene Symbol
-
Assembly
GCA_947172395.1
Location
OX359228.1:8695071-8696940[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.15 3e+02 2.0 0.0 52 86 100 133 92 134 0.81
2 5 0.0032 6.6 7.4 0.1 31 85 173 226 149 228 0.70
3 5 0.0045 9.2 6.9 0.0 48 83 281 315 270 317 0.83
4 5 0.29 5.8e+02 1.1 0.1 3 31 360 387 358 392 0.85
5 5 0.077 1.6e+02 3.0 0.0 49 83 382 415 379 419 0.80

Sequence Information

Coding Sequence
ATGGAAATCAATAATCCTCAAAGTTATTGGTTTGTCGTAAGAGAAGACCAAAGCAATGTAATATTTAGCAGTAACAATTTTACCATACAAACACCGCAGAGCCAAGACTCCAGATATATCATAGACAGCTCTGCAGACAACAGACAATATGTTGATAATGTCCAAACAGATAATATACAAGAAACCCAACAGGACTCTGCAAAAGAAACCAAAGACAGTAACATTTGGGATAGAAATAAAATAAAATTACTATTGTCTCTATGTCTGGAAACCAGATTCAAAAGTTCAAATAGAGAAAAAATCCTGTGGAATGAAATATCCATACTTTTAGGGACAACACCAGAAGAGTGTGACAAAAAGTATAGAAACCTCCGTAGAACATACATAAGACTGCTGAAGAAGAATCGAGCTGGTAAAGATATAAAATGGGTGCACTATAGCTTGTGCGATGAAGTCTTTAAAGATTGTAAATCAATGTCTGTGACCCTTCTTCCACCTTGGGAGGACAGCAAAGTTAGGAAACTACTAAACTTATATATCGAAAACATAAGTAAGTTTCGGAGTACAGATCATCTACAAAAGGACATATGGAAGGACATTGCTTCACAGCTAAACACAACAGAGTACAATTGTTACCATAAGTTCAAGAATATGAAGAGAACTTACTTCAACTGGATCGAAAGGAGCCAAGAGACAGGTAAGTTGAGAAAGTGGCCGTACCATCAATACTTTGAAAAAATCTACTACAACTATAACCCAGATTTAGGACCTTGGAATAGGAATAAAGTCAGACAACTGATAAATGCATATTCAGACATTGCACATAAGTTTAAAAATCCAAAATTACAAAAAAAGGAACTATGGAGGGAGATTGGTAGAAAAGTTGGTGAATCACCTAGTAATTGTGATAGGAAATTTAGGAATCTAAAACAGACTTACTTAAGATTGAAAATGAGAGCTGACTCTGGGAGGTTGGTGACTAAATGGAGATACTATAAAGACTTTGTCACAATATTTGAGAATGACTCGTATGCTGTCATAGAACAGGGACAGGAGATGGTGTGCAAACCTTTGGAACACAATTATATTAAGCAACTATTGACATTCTATTTAGAGAATAAGCAAAAATTCAATGATCCACTTGTGAAGAAGAAACATTTGTGGAGGCTAATCGGTCCACGACTCGGACTGACTGCAGAAGAATGTGACAAGAAGTTCCGTAACATGAAACAAACTTATATAAGATTAGCTGAGAAGATGAGGGACACAGGGAAAGATAACACCTGGCCATATTACTCATACTTTGAACAAATCTACAATGGGTCTATAAATTCTAGATATAGAGAGTGCAATCACAAATGCTCCATTGACAATACAACTATAAAGGAATTAAAAAATCTTGTTAACAACCATGAGACAAAGGAAATGGATAAGTTTGAGAAACTTGTCTCAGTCATAGAAGATTCAAATAAAATTCAAAGGGAAAGAAATAGAATTCTACAAGCTCTTTTGAATAGATAG
Protein Sequence
MEINNPQSYWFVVREDQSNVIFSSNNFTIQTPQSQDSRYIIDSSADNRQYVDNVQTDNIQETQQDSAKETKDSNIWDRNKIKLLLSLCLETRFKSSNREKILWNEISILLGTTPEECDKKYRNLRRTYIRLLKKNRAGKDIKWVHYSLCDEVFKDCKSMSVTLLPPWEDSKVRKLLNLYIENISKFRSTDHLQKDIWKDIASQLNTTEYNCYHKFKNMKRTYFNWIERSQETGKLRKWPYHQYFEKIYYNYNPDLGPWNRNKVRQLINAYSDIAHKFKNPKLQKKELWREIGRKVGESPSNCDRKFRNLKQTYLRLKMRADSGRLVTKWRYYKDFVTIFENDSYAVIEQGQEMVCKPLEHNYIKQLLTFYLENKQKFNDPLVKKKHLWRLIGPRLGLTAEECDKKFRNMKQTYIRLAEKMRDTGKDNTWPYYSYFEQIYNGSINSRYRECNHKCSIDNTTIKELKNLVNNHETKEMDKFEKLVSVIEDSNKIQRERNRILQALLNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091480;
90% Identity
-
80% Identity
-