Basic Information

Gene Symbol
osa
Assembly
GCA_947172395.1
Location
OX359226.1:5631977-5653187[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-26 8.3e-23 80.8 0.0 2 89 300 384 299 384 0.95

Sequence Information

Coding Sequence
ATGCGTAGTCATGTCCGAGCTCACGATTTGTGCCGAGTGCGAGGTGGGAAAGTAAAGACCTCGGCCTGCGCTGCGGCTGCCCTTGACAGAGCTGGTTGTGACTTGCGCGCCGCCCGCGCGTTACCAAACTGCTTTGAATGTTTCGATATCGTTTGTTGTTGTGAGGCGAAATACCAGTTGGGTACCCAGAACGTACCGATGCCGCCGCGGCCGTCGTCGTCGTTGTCGGACGGTGGCGGGCCCGCCGCGCCGGGCCGCCCGGGCTCTGGCGCAGGCCCCCCGCCGTCGGGCGCACCGCCGCCGGGCGCCATGCTACCGCAGCCCTACCCGCACCACGGGCCGCCCTACAAGCCGGCGCCCTACCCGCCGCAGCAGTACGCGTACCCGCCACGGAACCATCACCCCTACCCCTACGGCGGCTACAGGCCTACGCCGCCGCCGCACCCATCACAACACTACCCACCGCTCAAGCAAGCGGGGCGGCACATGGGCCCGCCCGGCGAGGCGATGCCGCCGCCCACGGCGCCCGGCGAGTCGCACGACAACGGGCCCGCCGCGCCCGCCACCGCGCTCGTCACCACCGGGCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCGTCCGCCGCGTCAGGCGAGGAGCCGTGCGGCACGCCGAAGAGTTCGCGCAAAGAGTACGGGCCGGGCAGCGCGGCACCGTCGCCGTCGCCGGGCGGCGCGTCGCACTCGTCGGCGCACGACGACTACGACGCCGCGCCCTCGCCCTGGCCGCGCCCGCCCTCTAGTCCCGTGTTTAACAGTCACATACCGCAGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGCCGCAGCTGGGTGGAGCGGCTGCTGGCGTTCATGGAGGACCGGCGCACGCCCATCGCCGCCTGCCCCACCATCAGCAAGCAGCCGCTGGACCTCTACCGGCTCTACCTGCTGGTGCGCGACCGCGGCGGGTTCGTTGAGGTGACGAAAAACAAAACGTGGAAAGACATCGCGGGCTTGCTCGGCATCGGCGCGTCATCGTCAGCGGCGTACACGTTACGGAAGCACTACACCAAGAACCTGCTGGCGTACGAGTGCCACTTCGACCGCGGCGGGATCGACCCGCAACCCATCATCAACCAGGTGGAAGCGTCCACGAAGAAGAAGAGTGGCAAGTCCAATAGTACGTCTAATGCAGGGTCATCAAATTCACAAGAGCAGTTCGGGGCGGGCGGCGCGGCGCAGGGCGGCGCCCCCATGGACGGCTACCCCGCGCACTACGCGCCCTACCCGCCGCAACCCAACCAGCCGCAAGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCTTTCGACGAGCCGCCGGGGCCCAGGCGACCCCCAGGTTACCAGCAAGGTTACGGCTACGAATACGGTCCCTCCTACCCCGCGAATAGGCCGGTGTACCCACCCTATGGTCCTGAGGGGGATCGGGGTTACGCGTCCGGCGGCGAGTACCGGTACGGCGGGTACGGCGGGTACCGCGCGGGCGCGCCCCCCGCCCCGCCCGCGCCCCCCGGCGGCGCGCAGTCCCCCGCCGCCGCGCCCGCGCCGCCCGCCTCCCCCGCGCAGCCCTACCCCGACTACTTCCGCGCGCAGCATCCGCACCATCCGCACCCGCACCCGCAGCATCCGCCGCCGCATCCGCCGCACTCGCCACAACAACCGCACGAGATGTCCGGCGGGGCCGCGTGCGGCGCGGGCATTATGGGCTCGCAGCTCGCGCGGCAGCTGGTCGCGCCGCTGCCGTCGCCCGCCCGCCCCTACGTACGGACGCCCCGTTTGTACCACGCACTCAACACCGCTTCCCATATATTGGCGTTGCCCTTCGGTATCATCGCTCGCACCACCGAACCGCCGGCCGACCGACCCGCTCGCCGCCACGCCGCGTCGTAA
Protein Sequence
MRSHVRAHDLCRVRGGKVKTSACAAAALDRAGCDLRAARALPNCFECFDIVCCCEAKYQLGTQNVPMPPRPSSSLSDGGGPAAPGRPGSGAGPPPSGAPPPGAMLPQPYPHHGPPYKPAPYPPQQYAYPPRNHHPYPYGGYRPTPPPHPSQHYPPLKQAGRHMGPPGEAMPPPTAPGESHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPCGTPKSSRKEYGPGSAAPSPSPGGASHSSAHDDYDAAPSPWPRPPSSPVFNSHIPQESYRSKKSDSLGKLYEMDDAPERRSWVERLLAFMEDRRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSNAGSSNSQEQFGAGGAAQGGAPMDGYPAHYAPYPPQPNQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGPSYPANRPVYPPYGPEGDRGYASGGEYRYGGYGGYRAGAPPAPPAPPGGAQSPAAAPAPPASPAQPYPDYFRAQHPHHPHPHPQHPPPHPPHSPQQPHEMSGGAACGAGIMGSQLARQLVAPLPSPARPYVRTPRLYHALNTASHILALPFGIIARTTEPPADRPARRHAAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00212207;
90% Identity
iTF_00642124;
80% Identity
-