Btha017090.1
Basic Information
- Insect
- Bhutanitis thaidina
- Gene Symbol
- zfy1
- Assembly
- GCA_029286595.1
- Location
- JAGSMS010000039.1:2452317-2465737[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.7 1.1e+02 3.7 2.2 1 23 327 350 327 350 0.89 2 11 0.17 11 6.9 1.8 1 23 357 379 357 381 0.95 3 11 5.1 3.3e+02 2.3 0.8 1 23 383 406 383 406 0.92 4 11 0.41 27 5.7 1.6 1 23 413 435 413 435 0.83 5 11 3.5e-06 0.00023 21.6 0.4 2 23 440 462 439 462 0.93 6 11 2.3e-05 0.0015 19.1 0.9 1 23 468 490 468 490 0.97 7 11 0.04 2.6 8.9 2.3 3 21 505 523 504 528 0.93 8 11 3.3e-05 0.0021 18.6 2.0 1 23 536 559 536 559 0.94 9 11 2.1e-05 0.0013 19.2 0.2 1 23 564 587 564 587 0.97 10 11 2.5e-07 1.6e-05 25.2 1.4 2 23 595 616 594 616 0.97 11 11 2.6e-06 0.00017 22.1 1.5 1 23 622 645 622 645 0.95
Sequence Information
- Coding Sequence
- atgGAGCACAAAGTTGAAACGGCAAAGAATCTGTTATGCATGGCATGTTTGTGTGTTGACCGAAGTTTAAGCGAACTCACTAATGCAAAATTGAAACAgtattatttaagttgtttatatGAAATTCCTCTTTGCAATATGCCTAAAAATCTAAGCATATGCTGGGAGTGCGTGGCAATGCTGAAGAAAGTTGTCATCTTTAAGGAGCAAGTGAAAGATTCCTATAGAATCCTCCAGACATACACTAGTGAGAACCTTGCCGAATGTCTACTGACAGATGTGTCTAGACCGCCACGTCTCAAACTATATGTTAACAAGCAGATAAATATAGCACCAAGTCATGATATAAACGAGAAGGAGAAGCCTTTAAAAGACAATACAGTGAGTGTAAAGAATGAGCTTAAATCTGAGGGGCAGGAAAAAGatgTGGAAGCTTTAAAGATCAGTCTAGAACGTATGGACAGTCCTATATCAGATAGCTCAGATGGAGAAATGGAGACCAAGTTGCAGGAGATTACTAGTTGTACCGAGAGGCCCATGAATGTAACCCAGGTGAAAGGAAATATTTTGATCAAAAATACTTTAGAGTGTGAAGACTTAGAGGAGCACAAACCAAGGGAAATGCATATTGTGTGTGTGAAGGATGAATTGAAAGTGGAGTATGATAAAAAAGGTTTTGAAGAAGATGATTCAGATCCAATAGACTGTCCAACATCAGACTGTTCTGATATAGAATTGGAGTCGAAGTTGCAGAAGTTCCTGAGCAAAACGAAGAAGAATAGAAAGAAGACCAAGAAAACTGTGAAAGGCGTGGTTAAAAAGAGAAAGAAGATTGTGAAACCTGAGAATGAAAAGAAGATCCAGAAAAGAGGGGAACTCGACCCGGAAAAGAGAATACTGACAGTGAAATTGACTTACGAGGAGATGCTCTCCGAGAGACAGAAGGAATCCTCGAAAGAGACGTTCCTGAAAGCCGTCTACAAGTGTGAGACATGCCTCATAGGTTTCAATAACAGCAAGTCTCATAAAACGCATGTTGCGAACAAACATGCACTGGACCTCGGAAAGTACAGCTGTCCAATCTGCAGCACGGTCATATCGTCTGTGGATTCCTTCACGGAGCACTGTAAGAGGCACTTCAGAAGATACGAGTGCATCATCTGCCGCAAGCGGACCATGGACAAGAAGGCTATAGAGCAGCATTACTTCTCCACGCACGAGATCTCCCTGAAGGAGTATCAGTGCAACTTGTGCGGGAAGATCTCCAACTCGATAGACAGCCACCGCTACCATCGCGACAGCCACAAGGCGCGCGTGCAGTGCCCCGACTGCGACAAGACCTTCAGCCACCGCGCCGGACTAATGAACCATCGCCTGGCTGTACACGAATTGCAGAACACATTCCCCTGCACTATATGCGACAAGGTGTTCAGGTGGAGGACCAGTCTTAAACGGCATCTGGAGAAGCACGATTTGAAGGCTAAAGGCGCGAGCGGCGGTGGGGAGGCGTTCTGCGCCACGTGCGGTATCGACTTCTCCTCGCTGTGCTCCTATCGTAGGCACTTGCGGAACAGCCTGAAGCACGTCACGCGAGATCAGCTTAAGTTCATTTGCGACCACTGCAACAAGCGGTTTGCGGATAAAACGAAGTTAAGAGATCATATTGAGGAGAAACACTTGCATAGAGTCTACCAGTGTCCTATTTGTAACAAGGCGACGAAGAACCGAGTGGGCCTGGACCAGCACATCAGGTACGTGCACCGGAGCAGGCCAAACAACAAGATGTGCCACTACTGCGGCAAGGGATTCCCGACAAAAGTCCAGCTGGAGTCCCACATTCGAACTCACACCGGGGAGAGGCCATTCATATGCGAGTACTGTCCAACGACCTTTTCGCAGAAGTCCAACTTGTATAAGCACAACCGTCAGGTGcatctaaatataaaaaccaaacgGTACCCGTTGTGCAAGAAGAGAAAAGAAGAGAGGAAACCGTCGGAAGCCGCAGCGTACCAGTCTATAGAGGAGCCAAATCAGAAACCACCTGAGGATCAGAAAACGCCACACTACAACGAAAACCTCTTTAACAATGCGACAAGACAAAGAAACGGCGAATTTGTGCTGGGATGGTGA
- Protein Sequence
- MEHKVETAKNLLCMACLCVDRSLSELTNAKLKQYYLSCLYEIPLCNMPKNLSICWECVAMLKKVVIFKEQVKDSYRILQTYTSENLAECLLTDVSRPPRLKLYVNKQINIAPSHDINEKEKPLKDNTVSVKNELKSEGQEKDVEALKISLERMDSPISDSSDGEMETKLQEITSCTERPMNVTQVKGNILIKNTLECEDLEEHKPREMHIVCVKDELKVEYDKKGFEEDDSDPIDCPTSDCSDIELESKLQKFLSKTKKNRKKTKKTVKGVVKKRKKIVKPENEKKIQKRGELDPEKRILTVKLTYEEMLSERQKESSKETFLKAVYKCETCLIGFNNSKSHKTHVANKHALDLGKYSCPICSTVISSVDSFTEHCKRHFRRYECIICRKRTMDKKAIEQHYFSTHEISLKEYQCNLCGKISNSIDSHRYHRDSHKARVQCPDCDKTFSHRAGLMNHRLAVHELQNTFPCTICDKVFRWRTSLKRHLEKHDLKAKGASGGGEAFCATCGIDFSSLCSYRRHLRNSLKHVTRDQLKFICDHCNKRFADKTKLRDHIEEKHLHRVYQCPICNKATKNRVGLDQHIRYVHRSRPNNKMCHYCGKGFPTKVQLESHIRTHTGERPFICEYCPTTFSQKSNLYKHNRQVHLNIKTKRYPLCKKRKEERKPSEAAAYQSIEEPNQKPPEDQKTPHYNENLFNNATRQRNGEFVLGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -