Basic Information

Insect: Bhutanitis thaidina
Gene Symbol: Znf296
Assembly: GCA_029286595.1
Location: JAGSMS010000001.1:1559100-1573800[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00051 0.033 14.8 0.4 3 20 188 205 186 209 0.95

2 10 0.011 0.73 10.6 1.0 2 23 249 270 248 270 0.95

3 10 0.015 0.97 10.2 0.3 2 21 376 395 375 396 0.93

4 10 0.0021 0.13 12.9 2.4 3 23 406 427 405 427 0.96

5 10 0.0069 0.45 11.3 1.4 1 19 445 462 445 463 0.84

6 10 1.3e-07 8.1e-06 26.2 2.4 3 23 475 495 473 495 0.96

7 10 6.8e-05 0.0044 17.6 3.6 1 23 501 523 501 523 0.99

8 10 8.9e-07 5.7e-05 23.5 0.5 1 23 529 551 529 551 0.98

9 10 1.3e-07 8.5e-06 26.1 0.7 1 23 557 579 557 579 0.99

10 10 0.0033 0.22 12.3 0.8 1 23 585 607 585 607 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00051	0.033	14.8	0.4	3	20	188	205	186	209	0.95
2	10	0.011	0.73	10.6	1.0	2	23	249	270	248	270	0.95
3	10	0.015	0.97	10.2	0.3	2	21	376	395	375	396	0.93
4	10	0.0021	0.13	12.9	2.4	3	23	406	427	405	427	0.96
5	10	0.0069	0.45	11.3	1.4	1	19	445	462	445	463	0.84
6	10	1.3e-07	8.1e-06	26.2	2.4	3	23	475	495	473	495	0.96
7	10	6.8e-05	0.0044	17.6	3.6	1	23	501	523	501	523	0.99
8	10	8.9e-07	5.7e-05	23.5	0.5	1	23	529	551	529	551	0.98
9	10	1.3e-07	8.5e-06	26.1	0.7	1	23	557	579	557	579	0.99
10	10	0.0033	0.22	12.3	0.8	1	23	585	607	585	607	0.98

Sequence Information

Coding Sequence: ATGGCTTCTTCGAGAAAAATAGTAGAAATTAAAGTAGAAGAGTTATGTCGGACTTGTTTAGCTAAAGAAATAGAATTATTTTCGGTGTTCGATGTTTGTATGGAGGGGAAAGCGCTGGATCATATAATAACATCAATAACGGGCCTGAAGatTGACAAAAGTGATGGACTTCCTACAAAAATCTGTCAAGAATGTAAAAGCAAGGCTGTCAATGCAtatggttttaaaaagaaatctcaTGAAGCTGATTTCGCATTACATGGAATTCTCAAGAGAGAAGAAATAGACAATGCTTCATTATGTAGCGAGAATATAAGCGTTGATGTGAAAGTGGAGGATTATCCATCAGATGAACATGATGATTTGATTGATTTGGAGTATAACCTTTCATTGCCTGATGCGAGCAATGAGTTTACAGACACAGTTAAAATAGAAACAAGTGCGAATGGAACGCAACAATTCAAGAGTTGTAGTACAGATGTTGAACAATCAGATCATTTACCAGACCAGATGAAAAAGAAGTGCATCAAAGtggaATATGAGTTGAGCAGCAGCACATTCTGTCCACTGTGTGGTATCTGCTACGTAGATTCTGACGGCCTCACCAAACACATGTGGGAGAGTCACGCAGAAGTGATGGGGCCAAAGAAAAGGGGCAGGCCAAAGAAAATGGTAACTGATACAATTTTAAACAAGCTCTCAGAAAATGGatactatttaaaaactgtCCCGGTGAAGAGATTGAACTGTTCATTTTGCAAGGGGAAGTATAAAACCAAAGAGGAATTAGTTACGCATATGACGGAGCACAAGgATACCAAAGTGctgtgttgtattatttgtaagaaaatGTATCTGAAGAAGAAATTTTTTGACTCTCACTTGTGTGCGGAAGAAAAAAATCAAGGAACTAATTTAGATGAGATTGATCCTGCCATGGTTTTGCCCAACAAAGGTGAACATGAGGATTTCATGATAGAGACTTACCTGCATCAGTTGCTGGACCTGAGCAACAATCCGGAGGGGGCCGCGTCTTGGCAGGCCTGTGGCGCGTGCAGCGTGCTACTGGGTGGCCCCGCCGAGCTGGCTGAGCACGTGGACGAATTTCATCCGGAGCAGTCGTTGCGCTGTGCGCTCTGTAACAAGGTGTTCGCGACGATCAAGTCCGCGACTCGTCACCGTAACAAATGTTCGCGGGTGGAGAGGACGCACGGTTGCACAACTTGCGGGCAGCGGTTCGCGCACGAGATATCGCTGAACAAGCACATCCTGCACAACCACGCCGGGCAGAGCGTCTCCGTGAAGTTCACAGACAGCGCCGACGGCGAGCGGTACCAGTGCGACACCTGCAATCGCTCCTTCTACAGGTCGCATATGCGCGTGCACGGGACGGGCACAAGCAACAGTGCGGGCGCATGCCTGTGCTTATATTGCGGCCGGAGTTTCACCAACTCGTCCAACCTCATCGTGCACATGCGACGGCATACAGGCGAGAAGCCATACAAGTGCGACTTCTGCGATAAAGGGTTCCCTAGATCATCGGACCTGCAGTGCCACAGGCGGTCCCACACCGGGGAGAAGCCGTACATATGCGGCGTCTGTGGGAAAGGCTTTTCGCGCAGCAACAAGCTGTCGCGGCACACGCGCGTGCACACCGGCCTGCGCCCGTACAAGTGCCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTGAACCTGCACGTGCGGCGGCACACGGGCGACAAGCCCTACATCTGCGAGCTGTGCGGCGACCGCTTCATACAGGGTACGGCGCTGCACAACCACCGGCGCACGCACGGCCACTACCGGGTGGGGGGGACGGCGCGGGCGGGGGCACGGGCGCCCCACCCCCCCTCGCGGCCCCCCACGCCCCGCTGCCCGCACGGCCGCGTCGCTAACGCGTCACCCTGGCCAATAACTATCTGTACATTCGTGCGAATAAATGATTCCAACAGTTTAGCCATTGATCGTGTGATTATTTCCtgtcaattaatttattatttcagcgCGAGAGGTCGCCGCTATTATCGAGGTAATAAATAG
Protein Sequence: MASSRKIVEIKVEELCRTCLAKEIELFSVFDVCMEGKALDHIITSITGLKIDKSDGLPTKICQECKSKAVNAYGFKKKSHEADFALHGILKREEIDNASLCSENISVDVKVEDYPSDEHDDLIDLEYNLSLPDASNEFTDTVKIETSANGTQQFKSCSTDVEQSDHLPDQMKKKCIKVEYELSSSTFCPLCGICYVDSDGLTKHMWESHAEVMGPKKRGRPKKMVTDTILNKLSENGYYLKTVPVKRLNCSFCKGKYKTKEELVTHMTEHKDTKVLCCIICKKMYLKKKFFDSHLCAEEKNQGTNLDEIDPAMVLPNKGEHEDFMIETYLHQLLDLSNNPEGAASWQACGACSVLLGGPAELAEHVDEFHPEQSLRCALCNKVFATIKSATRHRNKCSRVERTHGCTTCGQRFAHEISLNKHILHNHAGQSVSVKFTDSADGERYQCDTCNRSFYRSHMRVHGTGTSNSAGACLCLYCGRSFTNSSNLIVHMRRHTGEKPYKCDFCDKGFPRSSDLQCHRRSHTGEKPYICGVCGKGFSRSNKLSRHTRVHTGLRPYKCPYCEKAFSQSNDLNLHVRRHTGDKPYICELCGDRFIQGTALHNHRRTHGHYRVGGTARAGARAPHPPSRPPTPRCPHGRVANASPWPITICTFVRINDSNSLAIDRVIISCQLIYYFSARGRRYYRGNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -